mRNA_P-wetherbeei_contig57087.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57087.1.1 vs. uniprot
Match: A0A521LXM2_9HYPH (Uncharacterized protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521LXM2_9HYPH) HSP 1 Score: 203 bits (517), Expect = 2.210e-63 Identity = 99/148 (66.89%), Postives = 115/148 (77.70%), Query Frame = 1
Query: 1 RIVLSFLALLLAALLALQAQGSDQNVSNDPLTPLGAVQVQNYFQPFLNGQTGSGADQLNVRGVLPHEAFGLPQFARVTLPVMVSAWGPNGSTTGFGDITIFNLFVHTIDNVRLGVGPLAVAPTATSPALGETKWQLGGQGIVSARHDW 444
RIV LA LLA A AQ + QN NDPLTP A+Q+Q+YFQPFLNGQTGSGA+Q NVRGVLPH+AFG+ QFAR + P + SAWGP GS TG GD+TIF++ V +DNV+ GVGPLAV PTATS ALG+ +WQLGGQGI SARH W
Sbjct: 4 RIVRRLLAALLALPAAAAAQDNAQNEGNDPLTPKAALQLQDYFQPFLNGQTGSGANQTNVRGVLPHDAFGVAQFARASFPALASAWGPGGSQTGIGDLTIFDVPVFFVDNVKFGVGPLAVVPTATSTALGDRRWQLGGQGIASARHTW 151
BLAST of mRNA_P-wetherbeei_contig57087.1.1 vs. uniprot
Match: A0A6N6ZSJ3_9PROT (Uncharacterized protein n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A6N6ZSJ3_9PROT) HSP 1 Score: 162 bits (410), Expect = 2.330e-47 Identity = 72/134 (53.73%), Postives = 98/134 (73.13%), Query Frame = 1
Query: 43 LALQAQGSDQNVSNDPLTPLGAVQVQNYFQPFLNGQTGSGADQLNVRGVLPHEAFGLPQFARVTLPVMVSAWGPNGSTTGFGDITIFNLFVHTIDNVRLGVGPLAVAPTATSPALGETKWQLGGQGIVSARHDW 444
+AL + QNV+N+PLT + A+QVQNY QP ++G+ GSGADQ VRG+LPH+ FG PQ R +L + WGP G+ +G GD+T+F++ + + N +LG+GPL + PTATSPALGE KWQ G QG+VSA +DW
Sbjct: 5 MALSPAAAQQNVANNPLTDIPAIQVQNYLQPVMSGRPGSGADQPFVRGILPHDTFGWPQLMRASLATGTTVWGPAGTESGLGDLTLFDVPLFQLANAKLGIGPLLILPTATSPALGERKWQAGVQGVVSAPYDW 138
BLAST of mRNA_P-wetherbeei_contig57087.1.1 vs. uniprot
Match: A0A512NRB8_9HYPH (Uncharacterized protein n=2 Tax=Reyranella soli TaxID=1230389 RepID=A0A512NRB8_9HYPH) HSP 1 Score: 147 bits (370), Expect = 6.140e-41 Identity = 70/140 (50.00%), Postives = 95/140 (67.86%), Query Frame = 1
Query: 25 LLLAALLALQAQGSDQNVSNDPLTPLGAVQVQNYFQPFLNGQTGSGADQLNVRGVLPHEAFGLPQFARVTLPVMVSAWGPNGSTTGFGDITIFNLFVHTIDNVRLGVGPLAVAPTATSPALGETKWQLGGQGIVSARHDW 444
L LAA A+ QN +NDPLTP A QV +Y QP L+ + +GA QL +R VLPH+A G+ Q AR +LP++ ++WGP+G+ G GD T++++ + I +LG GPLA APTA++PALG KWQ G Q +VSA HDW
Sbjct: 34 LALAAPATTAAKDDSQNEANDPLTPKMAFQVHDYAQPILSERPEAGAHQLYLRHVLPHDALGVDQIARASLPLIANSWGPHGAWNGIGDFTVYDMAIAYIGQTKLGAGPLATAPTASAPALGSGKWQGGAQTVVSAAHDW 173
BLAST of mRNA_P-wetherbeei_contig57087.1.1 vs. uniprot
Match: A0A1Q3KL04_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium 65-37 TaxID=1895711 RepID=A0A1Q3KL04_9PROT) HSP 1 Score: 144 bits (364), Expect = 2.840e-40 Identity = 73/150 (48.67%), Postives = 99/150 (66.00%), Query Frame = 1
Query: 13 SFLALLLAALLA-LQAQGSDQ-----NVSNDPLTPLGAVQVQNYFQPFLNGQTGSGADQLNVRGVLPHEAFGLPQFARVTLPVMVSAWGPNGSTTGFGDITIFNLFVHTIDNVRLGVGPLAVAPTATSPALGETKWQLGGQGIVSARHDW 444
+FLA LLA+ L L A + N SN+PLTP A Q+ NY QP L G+ SGADQ +R VLPH+A G+ Q RV++PV+ S+W P+G+ G GD+T F++ V + ++G+GPL V PTA++PALG +KWQ G Q +VSA H W
Sbjct: 4 AFLAALLASFLVELPATAQTEADNPLNTSNNPLTPKMAFQLHNYAQPVLTGRPSSGADQAYLRFVLPHDALGVDQIMRVSMPVVASSWDPHGAVNGVGDLTAFDMAVFHLGFAKVGIGPLVVVPTASAPALGASKWQAGAQTVVSAPHSW 153
BLAST of mRNA_P-wetherbeei_contig57087.1.1 vs. uniprot
Match: A0A6N6ZS52_9PROT (Uncharacterized protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A6N6ZS52_9PROT) HSP 1 Score: 132 bits (333), Expect = 1.040e-35 Identity = 64/125 (51.20%), Postives = 80/125 (64.00%), Query Frame = 1
Query: 70 QNVSNDPLTPLGAVQVQNYFQPFLNGQTGSGADQLNVRGVLPHEAFGLPQFARVTLPVMVSAWGPNGSTTGFGDITIFNLFVHTIDNVRLGVGPLAVAPTATSPALGETKWQLGGQGIVSARHDW 444
QN SNDPLTP A + NY QP L + SGADQ R VLPH FG+ Q R ++PV+ SAW P + G GD T+F+L V +V+ G+GPL V PTA+S ALG +KWQ G + +VSA H W
Sbjct: 21 QNRSNDPLTPRMAFEFHNYAQPVLAERPASGADQGYFRFVLPHALFGVDQMMRASMPVVASAWDPEKAVNGVGDFTVFDLAVFYFGSVKTGIGPLLVVPTASSQALGTSKWQAGVEAVVSAPHTW 145
BLAST of mRNA_P-wetherbeei_contig57087.1.1 vs. uniprot
Match: I4YN18_9HYPH (Uncharacterized protein n=1 Tax=Microvirga lotononidis TaxID=864069 RepID=I4YN18_9HYPH) HSP 1 Score: 126 bits (317), Expect = 3.490e-33 Identity = 59/129 (45.74%), Postives = 80/129 (62.02%), Query Frame = 1
Query: 58 QGSDQNVSNDPLTPLGAVQVQNYFQPFLNGQTGSGADQLNVRGVLPHEAFGLPQFARVTLPVMVSAWGPNGSTTGFGDITIFNLFVHTIDNVRLGVGPLAVAPTATSPALGETKWQLGGQGIVSARHDW 444
+G+ QN +N+PLTP + +Q+YF P G G A+Q +RG++PH+ FG PQ R TLP+ + P GS TG GD+T+ +LFV + G+GP+ VAPTA+S ALG KWQ G GI A W
Sbjct: 26 EGNGQNEANNPLTPKTTINLQDYFIPSFKGLPGRDANQFLLRGLIPHKLFGAPQLFRFTLPIANAPTFPTGSDTGLGDLTLMDLFVIPGKGIEFGIGPMLVAPTASSDALGAGKWQAGAAGIAIAPQHW 154
BLAST of mRNA_P-wetherbeei_contig57087.1.1 vs. uniprot
Match: UPI00131DC0F6 (hypothetical protein n=1 Tax=Acidisphaera sp. S103 TaxID=1747223 RepID=UPI00131DC0F6) HSP 1 Score: 120 bits (302), Expect = 9.080e-31 Identity = 59/127 (46.46%), Postives = 79/127 (62.20%), Query Frame = 1
Query: 64 SDQNVSNDPLTPLGAVQVQNYFQPFLNGQTGSGADQLNVRGVLPHEAFGLPQFARVTLPVMVSAWGPNGSTTGFGDITIFNLFVHTIDNVRLGVGPLAVAPTATSPALGETKWQLGGQGIVSARHDW 444
+D N +N+PLTP + +Q+YF P LN G A+Q +RG++P + FG+PQ R TLPV + PNG+ TG GD+T+F+L V + V GVGPL VAPTAT+ G KWQ G G+ A W
Sbjct: 46 ADANAANNPLTPKITLNLQDYFLPSLNRVDGRSANQGLLRGLVPADPFGVPQLIRFTLPVATNPGFPNGTNTGLGDLTLFDLVVIPVKPVLFGVGPLLVAPTATNKNTGAGKWQAGVAGVAVAPQSW 172
BLAST of mRNA_P-wetherbeei_contig57087.1.1 vs. uniprot
Match: UPI001445B03B (hypothetical protein n=2 Tax=Novosphingobium TaxID=165696 RepID=UPI001445B03B) HSP 1 Score: 110 bits (275), Expect = 7.140e-27 Identity = 56/124 (45.16%), Postives = 68/124 (54.84%), Query Frame = 1
Query: 73 NVSNDPLTPLGAVQVQNYFQPFLNGQTGSGADQLNVRGVLPHEAFGLPQFARVTLPVMVSAWGPNGSTTGFGDITIFNLFVHTIDNVRLGVGPLAVAPTATSPALGETKWQLGGQGIVSARHDW 444
N +N PLTP + NY+ P LNG AD RG+LPH FG PQ R TLPV + P GS TG GD+ + +L + V GVGP+ VAPTA+S G KWQ+G G V A W
Sbjct: 36 NDANSPLTPTIMLSAHNYYIPSLNGVPDRDADVTLFRGLLPHLTFGKPQLFRFTLPVSTTPTFPTGSKTGVGDLLLMDLVMFPGKKVSFGVGPVVVAPTASSQRFGNGKWQVGASGAVVAPQSW 159
BLAST of mRNA_P-wetherbeei_contig57087.1.1 vs. uniprot
Match: UPI001C2D735B (hypothetical protein n=1 Tax=Novosphingobium sp. G106 TaxID=2849500 RepID=UPI001C2D735B) HSP 1 Score: 109 bits (273), Expect = 1.410e-26 Identity = 57/124 (45.97%), Postives = 69/124 (55.65%), Query Frame = 1
Query: 73 NVSNDPLTPLGAVQVQNYFQPFLNGQTGSGADQLNVRGVLPHEAFGLPQFARVTLPVMVSAWGPNGSTTGFGDITIFNLFVHTIDNVRLGVGPLAVAPTATSPALGETKWQLGGQGIVSARHDW 444
N +N PLTP + V NY+ P LN AD RG+LPH G PQ R TLPV + P GS TG GD+ + +L + +V LGVGP+ VAPTA+S G KWQLG G V A W
Sbjct: 36 NDANSPLTPTIMLSVHNYYIPSLNELPDRDADVTLFRGLLPHMTLGKPQLLRFTLPVSTTPTFPTGSKTGVGDLLLMDLVMFPGKSVSLGVGPVVVAPTASSARFGAGKWQLGASGAVVAPQKW 159
BLAST of mRNA_P-wetherbeei_contig57087.1.1 vs. uniprot
Match: A0A370HHI0_9HYPH (Uncharacterized protein n=1 Tax=Microvirga subterranea TaxID=186651 RepID=A0A370HHI0_9HYPH) HSP 1 Score: 108 bits (271), Expect = 2.470e-26 Identity = 53/129 (41.09%), Postives = 75/129 (58.14%), Query Frame = 1
Query: 58 QGSDQNVSNDPLTPLGAVQVQNYFQPFLNGQTGSGADQLNVRGVLPHEAFGLPQFARVTLPVMVSAWGPNGSTTGFGDITIFNLFVHTIDNVRLGVGPLAVAPTATSPALGETKWQLGGQGIVSARHDW 444
+G+ QN +N+PLTP + +Q+Y+ P G G A+Q +RG++P F PQ R TLP+ S P GS GFGD+T+ +L + V GVGP+ VAPTA++ ALG +WQ G + A W
Sbjct: 26 EGNAQNDANNPLTPKVTINLQDYYIPSFKGLPGRDANQFLLRGLIPLNLFDTPQLLRFTLPIANSPTLPTGSDPGFGDLTLIDLVLIPGKPVSFGVGPVLVAPTASTDALGTGRWQTGAAAVAIAPQSW 154 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57087.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57087.1.1 >prot_P-wetherbeei_contig57087.1.1 ID=prot_P-wetherbeei_contig57087.1.1|Name=mRNA_P-wetherbeei_contig57087.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=148bp RIVLSFLALLLAALLALQAQGSDQNVSNDPLTPLGAVQVQNYFQPFLNGQback to top mRNA from alignment at P-wetherbeei_contig57087:3..446- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57087.1.1 ID=mRNA_P-wetherbeei_contig57087.1.1|Name=mRNA_P-wetherbeei_contig57087.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=444bp|location=Sequence derived from alignment at P-wetherbeei_contig57087:3..446- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57087:3..446- >mRNA_P-wetherbeei_contig57087.1.1 ID=mRNA_P-wetherbeei_contig57087.1.1|Name=mRNA_P-wetherbeei_contig57087.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=444bp|location=Sequence derived from alignment at P-wetherbeei_contig57087:3..446- (Phaeothamnion wetherbeei SAG_119_79)back to top |