mRNA_P-wetherbeei_contig57052.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig57052.1.1
Unique NamemRNA_P-wetherbeei_contig57052.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig57052.1.1 vs. uniprot
Match: A0A7C5MTK6_9HYPH (DNA alkylation repair protein n=1 Tax=Devosia sp. TaxID=1871048 RepID=A0A7C5MTK6_9HYPH)

HSP 1 Score: 105 bits (262), Expect = 1.220e-25
Identity = 49/103 (47.57%), Postives = 67/103 (65.05%), Query Frame = 1
Query:   31 NVAAILKQLRAAGTDRKRASGVRVGIPMDKAYGVSVGVVRAIAKGLKGQHALAEPLWATDIHEARLLATIIADANAVRRTDVERWLRDVVSWDLCDHLCSNLV 339
            +V  +L+ L+A  +   +AS  R+G+P + AYGVS+ V+R +A+ +   HALA  LW T  HEARLLA ++AD        + RWL DVVSWDLCDHLC  L+
Sbjct:   15 SVTDVLRYLQANASQSHKASVARMGVPPENAYGVSIAVIRKLARQIGTNHALALSLWQTGNHEARLLAVLLADTKKTGDAQIRRWLEDVVSWDLCDHLCKILI 117          
BLAST of mRNA_P-wetherbeei_contig57052.1.1 vs. uniprot
Match: A0A7C1IVB0_9CHLR (DNA alkylation repair protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C1IVB0_9CHLR)

HSP 1 Score: 102 bits (253), Expect = 2.300e-24
Identity = 48/104 (46.15%), Postives = 69/104 (66.35%), Query Frame = 1
Query:   28 PNVAAILKQLRAAGTDRKRASGVRVGIPMDKAYGVSVGVVRAIAKGLKGQHALAEPLWATDIHEARLLATIIADANAVRRTDVERWLRDVVSWDLCDHLCSNLV 339
            P V  I++QLR  G++  RAS  R+G+P+  A GV + V+R + K L     LA  LW + +HEARLLA ++A+ + +    ++ WL DVVSWDLCDHLC+NL+
Sbjct:    2 PTVQQIIQQLRVYGSEEHRASKARLGVPLTSALGVPLPVIRQMGKELGRNQKLALALWQSGLHEARLLAALVAEPDKMTVELIDEWLSDVVSWDLCDHLCNNLL 105          
BLAST of mRNA_P-wetherbeei_contig57052.1.1 vs. uniprot
Match: A0A6C0GJ76_9BACT (DNA alkylation repair protein n=1 Tax=Rhodocytophaga rosea TaxID=2704465 RepID=A0A6C0GJ76_9BACT)

HSP 1 Score: 99.8 bits (247), Expect = 1.070e-23
Identity = 50/98 (51.02%), Postives = 62/98 (63.27%), Query Frame = 1
Query:   43 ILKQLRAAGTDRKRASGVRVGIPMDKAYGVSVGVVRAIAKGLKGQHALAEPLWATDIHEARLLATIIADANAVRRTDVERWLRDVVSWDLCDHLCSNL 336
            IL  L++ GT   RA   R GI    AYGVS+GV+R++AK  K  H+LA  LW T IHEAR+LA +I D   V  T +E W++D  SWDLCD  C NL
Sbjct:    6 ILTALQSHGTPENRAGMSRFGINTANAYGVSMGVIRSMAKSYKKNHSLALDLWNTGIHEARILAALIDDPKLVTETQMESWVQDFNSWDLCDQTCGNL 103          
BLAST of mRNA_P-wetherbeei_contig57052.1.1 vs. uniprot
Match: A0A847WH99_9FIRM (DNA alkylation repair protein n=1 Tax=Epulopiscium sp. TaxID=2384 RepID=A0A847WH99_9FIRM)

HSP 1 Score: 97.4 bits (241), Expect = 1.190e-22
Identity = 44/99 (44.44%), Postives = 69/99 (69.70%), Query Frame = 1
Query:   43 ILKQLRAAGTDRKRASGVRVGIPMDKAYGVSVGVVRAIAKGLKGQHALAEPLWATDIHEARLLATIIADANAVRRTDVERWLRDVVSWDLCDHLCSNLV 339
            I+++L+   +D+ +A+ VR+GIP D + GVS+  +R +AK +K  ++LA  LW T  HEA+LLA +I + + +   DVE+ +  V+SWDLCDHLC NL+
Sbjct:    6 IIRELKKLSSDKHKANVVRMGIPADTSLGVSIANLRKLAKEIKKSNSLAYQLWNTGYHEAKLLAVLIFEKDPIDIKDVEKLMNSVISWDLCDHLCKNLI 104          
BLAST of mRNA_P-wetherbeei_contig57052.1.1 vs. uniprot
Match: A0A2V8TJK7_9BACT (DNA alkylation repair protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8TJK7_9BACT)

HSP 1 Score: 97.1 bits (240), Expect = 1.850e-22
Identity = 46/101 (45.54%), Postives = 65/101 (64.36%), Query Frame = 1
Query:   34 VAAILKQLRAAGTDRKRASGVRVGIPMDKAYGVSVGVVRAIAKGLKGQHALAEPLWATDIHEARLLATIIADANAVRRTDVERWLRDVVSWDLCDHLCSNL 336
            V+ +L+ LR+       +S  R GI  DKA+GVSV  +R +A+ +   H LA+ LW T +HEAR LAT+IAD   V    +ERW++D+ SWD+CDH C N+
Sbjct:   20 VSDVLEALRSLSNPEAVSSMARFGIKADKAFGVSVPALRTLARSIGKDHPLAQELWDTGLHEARELATMIADPKQVTEDLMERWVKDIDSWDVCDHCCGNV 120          
BLAST of mRNA_P-wetherbeei_contig57052.1.1 vs. uniprot
Match: UPI00148C69E0 (DNA alkylation repair protein n=2 Tax=Enterococcus cecorum TaxID=44008 RepID=UPI00148C69E0)

HSP 1 Score: 95.5 bits (236), Expect = 6.550e-22
Identity = 45/99 (45.45%), Postives = 68/99 (68.69%), Query Frame = 1
Query:   43 ILKQLRAAGTDRKRASGVRVGIPMDKAYGVSVGVVRAIAKGLKGQHALAEPLWATDIHEARLLATIIADANAVRRTDVERWLRDVVSWDLCDHLCSNLV 339
            I+ +L+   +++ +A+ VR+GIP D + GVS+  +R +AK +K  + LA  LW T  HEA+LLAT+I +   +   +VER + DV+SWDLCDHLC NL+
Sbjct:    6 IINELKILSSEKYKANVVRMGIPEDTSLGVSIANLRKLAKEVKKSNNLAYQLWKTGYHEAKLLATLIFEKEPLAIKEVERLMDDVISWDLCDHLCKNLI 104          
BLAST of mRNA_P-wetherbeei_contig57052.1.1 vs. uniprot
Match: UPI001926FD71 (DNA alkylation repair protein n=1 Tax=Leucobacter zeae TaxID=1257004 RepID=UPI001926FD71)

HSP 1 Score: 95.5 bits (236), Expect = 7.390e-22
Identity = 48/102 (47.06%), Postives = 66/102 (64.71%), Query Frame = 1
Query:   31 NVAAILKQLRAAGTDRKRASGVRVGIPMDKAYGVSVGVVRAIAKGLKGQHALAEPLWATDIHEARLLATIIADANAVRRTDVERWLRDVVSWDLCDHLCSNL 336
            + A+++ +LRA  +  ++ S  R+GIP D++ GVSV  VR IAK      A+A+ LWAT IHEARLLA ++ D    R    +  + DVVSWDLCDHLC+ L
Sbjct:    2 DAASLVAELRAVASPERKRSVARLGIPEDRSIGVSVPEVRRIAKRAGRDDAVADALWATGIHEARLLAALVYDPRTFRLERADGLVADVVSWDLCDHLCNGL 103          
BLAST of mRNA_P-wetherbeei_contig57052.1.1 vs. uniprot
Match: A0A2W4PRK6_9CHLR (DNA alkylation repair protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2W4PRK6_9CHLR)

HSP 1 Score: 95.1 bits (235), Expect = 8.160e-22
Identity = 48/104 (46.15%), Postives = 65/104 (62.50%), Query Frame = 1
Query:   25 PPNVAAILKQLRAAGTDRKRASGVRVGIPMDKAYGVSVGVVRAIAKGLKGQHALAEPLWATDIHEARLLATIIADANAVRRTDVERWLRDVVSWDLCDHLCSNL 336
            PP+V  I+ +L A  +    A   R GI   +  GV V  +RAIA+ +   HALAE LWA+ IHEAR+LA+I+A+   V    +ERW+ D+ SWDLCD  C+NL
Sbjct:    5 PPDVTTIIARLEALASPADAAGMARFGIRGARVLGVPVKTLRAIAREIGRSHALAEGLWASGIHEARILASIVAEPQRVDPAQMERWVADLDSWDLCDQCCTNL 108          
BLAST of mRNA_P-wetherbeei_contig57052.1.1 vs. uniprot
Match: A0A845SMY0_9FIRM (DNA alkylation repair protein n=1 Tax=Anaerotruncus colihominis TaxID=169435 RepID=A0A845SMY0_9FIRM)

HSP 1 Score: 95.1 bits (235), Expect = 9.220e-22
Identity = 44/99 (44.44%), Postives = 68/99 (68.69%), Query Frame = 1
Query:   43 ILKQLRAAGTDRKRASGVRVGIPMDKAYGVSVGVVRAIAKGLKGQHALAEPLWATDIHEARLLATIIADANAVRRTDVERWLRDVVSWDLCDHLCSNLV 339
            I+K+L++  +++ +A+ V++GIP   + GVS G +R IAK +   + LA  LW T  HEA+LLA +I D   +  +D+E+ + +VVSWDLCDHLC NL+
Sbjct:    6 IIKELQSQASEKYKANVVKMGIPEKYSIGVSTGEIRNIAKRIAKSNELAFELWNTGYHEAKLLAVLIFDRKDITHSDIEKLMSEVVSWDLCDHLCKNLI 104          
BLAST of mRNA_P-wetherbeei_contig57052.1.1 vs. uniprot
Match: UPI00104FD8B5 (DNA alkylation repair protein n=1 Tax=Sporanaerobacter acetigenes TaxID=165813 RepID=UPI00104FD8B5)

HSP 1 Score: 95.1 bits (235), Expect = 9.220e-22
Identity = 44/99 (44.44%), Postives = 67/99 (67.68%), Query Frame = 1
Query:   43 ILKQLRAAGTDRKRASGVRVGIPMDKAYGVSVGVVRAIAKGLKGQHALAEPLWATDIHEARLLATIIADANAVRRTDVERWLRDVVSWDLCDHLCSNLV 339
            I+ +L++  + + +A+ +R+GIP D + GVS  ++R IAK ++  + LA  LW T  HEARLLA +I + N +   D+E  + DV+SWDLCDHLC NL+
Sbjct:    6 IIIKLQSKASKKHKANVIRMGIPEDYSIGVSTTIIRNIAKEIEKSNELAYKLWKTGYHEARLLAVLIFERNNLNTEDIEYLMNDVISWDLCDHLCKNLI 104          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57052.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C5MTK6_9HYPH1.220e-2547.57DNA alkylation repair protein n=1 Tax=Devosia sp. ... [more]
A0A7C1IVB0_9CHLR2.300e-2446.15DNA alkylation repair protein n=1 Tax=Chloroflexi ... [more]
A0A6C0GJ76_9BACT1.070e-2351.02DNA alkylation repair protein n=1 Tax=Rhodocytopha... [more]
A0A847WH99_9FIRM1.190e-2244.44DNA alkylation repair protein n=1 Tax=Epulopiscium... [more]
A0A2V8TJK7_9BACT1.850e-2245.54DNA alkylation repair protein n=1 Tax=Acidobacteri... [more]
UPI00148C69E06.550e-2245.45DNA alkylation repair protein n=2 Tax=Enterococcus... [more]
UPI001926FD717.390e-2247.06DNA alkylation repair protein n=1 Tax=Leucobacter ... [more]
A0A2W4PRK6_9CHLR8.160e-2246.15DNA alkylation repair protein n=1 Tax=Chloroflexi ... [more]
A0A845SMY0_9FIRM9.220e-2244.44DNA alkylation repair protein n=1 Tax=Anaerotruncu... [more]
UPI00104FD8B59.220e-2244.44DNA alkylation repair protein n=1 Tax=Sporanaeroba... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig57052contigP-wetherbeei_contig57052:170..508 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1235793.C809_00264
PFAMsDNA_alkylation
Model size339
Max annot lvl186801|Clostridia
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.56e-22
EggNOG OGsCOG4912@1|root,COG4912@2|Bacteria,1TSAW@1239|Firmicutes,24GX4@186801|Clostridia
DescriptionDNA alkylation repair enzyme
Cds size339
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186846.7964156-CDS-P-wetherbeei_contig57052:169..5081683186846.7964156-CDS-P-wetherbeei_contig57052:169..508Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig57052 170..508 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig57052.1.1prot_P-wetherbeei_contig57052.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig57052 170..508 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig57052.1.1

>prot_P-wetherbeei_contig57052.1.1 ID=prot_P-wetherbeei_contig57052.1.1|Name=mRNA_P-wetherbeei_contig57052.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=113bp
MQPSPHTKPPNVAAILKQLRAAGTDRKRASGVRVGIPMDKAYGVSVGVVR
AIAKGLKGQHALAEPLWATDIHEARLLATIIADANAVRRTDVERWLRDVV
SWDLCDHLCSNLV
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mRNA from alignment at P-wetherbeei_contig57052:170..508+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig57052.1.1 ID=mRNA_P-wetherbeei_contig57052.1.1|Name=mRNA_P-wetherbeei_contig57052.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=339bp|location=Sequence derived from alignment at P-wetherbeei_contig57052:170..508+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGCCGTCCCCTCATACCAAGCCACCGAATGTGGCGGCCATCCTCAA GCAACTGCGGGCCGCTGGCACCGACAGGAAACGCGCCTCCGGCGTGCGCG TCGGTATTCCCATGGACAAGGCCTACGGCGTCTCGGTTGGCGTCGTTCGC GCCATCGCGAAAGGCCTGAAGGGCCAGCATGCGCTCGCCGAACCGCTATG GGCGACCGACATCCATGAAGCGCGGCTGCTTGCGACAATCATAGCCGATG CGAACGCGGTGCGCCGGACCGACGTCGAGCGCTGGCTGCGCGACGTCGTA TCGTGGGATCTGTGCGATCATCTTTGCAGCAATCTCGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig57052:170..508+

>mRNA_P-wetherbeei_contig57052.1.1 ID=mRNA_P-wetherbeei_contig57052.1.1|Name=mRNA_P-wetherbeei_contig57052.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=339bp|location=Sequence derived from alignment at P-wetherbeei_contig57052:170..508+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGCCGTCCCCTCATACCAAGCCACCGAATGTGGCGGCCATCCTCAA
GCAACTGCGGGCCGCTGGCACCGACAGGAAACGCGCCTCCGGCGTGCGCG
TCGGTATTCCCATGGACAAGGCCTACGGCGTCTCGGTTGGCGTCGTTCGC
GCCATCGCGAAAGGCCTGAAGGGCCAGCATGCGCTCGCCGAACCGCTATG
GGCGACCGACATCCATGAAGCGCGGCTGCTTGCGACAATCATAGCCGATG
CGAACGCGGTGCGCCGGACCGACGTCGAGCGCTGGCTGCGCGACGTCGTA
TCGTGGGATCTGTGCGATCATCTTTGCAGCAATCTCGTG
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