mRNA_P-wetherbeei_contig56941.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig56941.1.1
Unique NamemRNA_P-wetherbeei_contig56941.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig56941.1.1 vs. uniprot
Match: A0A2D5ZSS2_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2D5ZSS2_9BACT)

HSP 1 Score: 117 bits (294), Expect = 1.500e-31
Identity = 58/108 (53.70%), Postives = 73/108 (67.59%), Query Frame = 1
Query:    1 LDLWIANDLENLEKIYNALVRFGAPRHILEDLAGLKPDEILFMGNPPVRVDFLQNVSGLNYANSYTRRKEVQWGDVPVVMVSLEDLIVSKRAAGRPQDLIDANELENF 324
            LDLWIA    N  ++  ALVRFGAP  I+E   G   DEI+++G+PPVRVD LQ + G+ +  +Y RR   QW  VPV ++S EDLI +KRAAGRPQDL+DA  LE  
Sbjct:   41 LDLWIAASATNRSRVERALVRFGAPSKIIETFRGAAIDEIVYIGSPPVRVDLLQQIPGIEFEEAYGRRLAGQWEGVPVSVISREDLIRAKRAAGRPQDLLDAEILEKL 148          
BLAST of mRNA_P-wetherbeei_contig56941.1.1 vs. uniprot
Match: A0A4U1IL51_9DELT (Uncharacterized protein n=1 Tax=Polyangium fumosum TaxID=889272 RepID=A0A4U1IL51_9DELT)

HSP 1 Score: 105 bits (261), Expect = 1.960e-26
Identity = 51/106 (48.11%), Postives = 74/106 (69.81%), Query Frame = 1
Query:    1 LDLWIANDLENLEKIYNALVRFGAPRHILEDLAGLKPDEILFMGNPPVRVDFLQNVSGLNYANSYTRRKEVQWGDVPVVMVSLEDLIVSKRAAGRPQDLIDANELE 318
            LDL++  D EN+ +  +AL  FG P  I+ DL    P+EI+++G PP+RVDFLQ++ G ++ +++ RR   +W  V V +VSL+DLI +KRAAGRPQDL+D   LE
Sbjct:   46 LDLFLDADRENMRRACDALRMFGVPESIVVDLDAATPEEIVWLGVPPLRVDFLQSMKGASFGDAWERRVVAEWEGVSVNIVSLDDLIEAKRAAGRPQDLVDMQNLE 151          
BLAST of mRNA_P-wetherbeei_contig56941.1.1 vs. uniprot
Match: A0A3M1FJB0_9BACT (Uncharacterized protein n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=A0A3M1FJB0_9BACT)

HSP 1 Score: 99.4 bits (246), Expect = 3.000e-24
Identity = 53/113 (46.90%), Postives = 70/113 (61.95%), Query Frame = 1
Query:    1 LDLWIANDLENLEKIYNALVRFGAPRHILEDLAGLKPDEILF------MGNPPVRVDFLQNVSGLNYANSYTRRKEVQWGDVPVVMVSLEDLIVSKRAAGRPQDLIDANELEN 321
            LDLWI+ D  N   ++NAL  FGAP      LAGL  D+         MG PP+RVD L  + GL +  ++ RR EV +GD+ V  +S  DLI++KRA+GRPQDL+DA  LE+
Sbjct:   41 LDLWISTDTANARAVFNALKAFGAP------LAGLTEDDFAEEGYFYQMGRPPMRVDILMGIPGLEFEAAWERRVEVDFGDLRVPFISKADLIIAKRASGRPQDLLDAESLED 147          
BLAST of mRNA_P-wetherbeei_contig56941.1.1 vs. uniprot
Match: A0A1M3N156_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium 68-20 TaxID=1895795 RepID=A0A1M3N156_9DELT)

HSP 1 Score: 97.8 bits (242), Expect = 1.340e-23
Identity = 44/106 (41.51%), Postives = 75/106 (70.75%), Query Frame = 1
Query:    1 LDLWIANDLENLEKIYNALVRFGAPRHILEDLAGLKPDEILFMGNPPVRVDFLQNVSGLNYANSYTRRKEVQWGDVPVVMVSLEDLIVSKRAAGRPQDLIDANELE 318
            +D+ +    +NL++   ALVRFGAP +++  +  +   EI++MG PP+R+DFL+++ G++ ++ ++R  E +  DV + ++SL+DLI +KRA+ RPQDLIDA  LE
Sbjct:   41 IDIVLEGSADNLQRAARALVRFGAPPNVVSSIESMDESEIVYMGQPPLRIDFLRSIDGVSASDLFSRAVEAEIDDVRMKVISLDDLIDNKRASARPQDLIDAELLE 146          
BLAST of mRNA_P-wetherbeei_contig56941.1.1 vs. uniprot
Match: A0A7Y4WG41_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7Y4WG41_9BACT)

HSP 1 Score: 94.7 bits (234), Expect = 2.150e-22
Identity = 47/106 (44.34%), Postives = 69/106 (65.09%), Query Frame = 1
Query:    1 LDLWIANDLENLEKIYNALVRFGAPRHILEDLAGLKPDEILFMGNPPVRVDFLQNVSGLNYANSYTRRKEVQWGDVPVVMVSLEDLIVSKRAAGRPQDLIDANELE 318
            LD+ +  D +N+ +  +AL+ FGA   I   L     DE+++MG+PPVRVDFL++  G+++  ++ RR    W  V V ++S EDLI SKRA+GR QD+IDA  LE
Sbjct:   44 LDVLLDPDPDNIRRACHALLGFGAQTDIAAHLEAAGEDEVVWMGHPPVRVDFLKDAPGVDFGTAWARRALATWNGVSVAVLSREDLIQSKRASGREQDMIDARNLE 149          
BLAST of mRNA_P-wetherbeei_contig56941.1.1 vs. uniprot
Match: A0A800CHK5_9CHLR (Uncharacterized protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A800CHK5_9CHLR)

HSP 1 Score: 94.4 bits (233), Expect = 2.670e-22
Identity = 46/103 (44.66%), Postives = 66/103 (64.08%), Query Frame = 1
Query:    1 LDLWIANDLENLEKIYNALVRFGAPRHILEDLAGLKPDEILFMGNPPVRVDFLQNVSGLNYANSYTRRKEVQWGDVPVVMVSLEDLIVSKRAAGRPQDLIDAN 309
            L+LWI+ D  N   +Y +L  FGAP   L +    +      MG PPVRVD L  + GL +++++ RR EV++ D+PV  +S +DLI  KRA+GRPQD+IDA+
Sbjct:   41 LELWISTDTANAAAVYRSLQEFGAPLADLAESDFAEEGYFYQMGVPPVRVDILMGIPGLQFSDAWERRTEVKFDDLPVTFISRQDLITVKRASGRPQDVIDAD 143          
BLAST of mRNA_P-wetherbeei_contig56941.1.1 vs. uniprot
Match: A0A850BY48_9CHLR (Uncharacterized protein n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=A0A850BY48_9CHLR)

HSP 1 Score: 94.0 bits (232), Expect = 3.590e-22
Identity = 50/103 (48.54%), Postives = 65/103 (63.11%), Query Frame = 1
Query:    1 LDLWIANDLENLEKIYNALVRFGAPRHILEDLAGLKPDEILFMGNPPVRVDFLQNVSGLNYANSYTRRKEVQWGDVPVVMVSLEDLIVSKRAAGRPQDLIDAN 309
            LD+ IA D +N E +YNAL  FGAP   L      +      MG PP+RVD +  + G+N+   + RR EV +  + VV +S +DLIVSKRAAGRPQDLIDA+
Sbjct:   41 LDVLIATDEKNAEAVYNALREFGAPLVGLTSRDFAEDGFFFQMGVPPIRVDVIMGIPGVNFGECWNRRVEVDFEGLKVVFISKQDLIVSKRAAGRPQDLIDAD 143          
BLAST of mRNA_P-wetherbeei_contig56941.1.1 vs. uniprot
Match: A0A520R2S0_9DELT (Uncharacterized protein n=2 Tax=Myxococcales TaxID=29 RepID=A0A520R2S0_9DELT)

HSP 1 Score: 94.7 bits (234), Expect = 4.430e-22
Identity = 47/105 (44.76%), Postives = 69/105 (65.71%), Query Frame = 1
Query:    4 DLWIANDLENLEKIYNALVRFGAPRHILEDLAGLKPDEILFMGNPPVRVDFLQNVSGLNYANSYTRRKEVQWGDVPVVMVSLEDLIVSKRAAGRPQDLIDANELE 318
            DLWI ++ ENL +   AL  FGAPR  +E L      ++++MGNPP R+D ++ + G ++A ++  R+ V  G+V V +V   +LI  KRA+GRPQDLIDA+ LE
Sbjct:   76 DLWIRDEPENLGRATRALEAFGAPRTTVESLRSAAGLDVVWMGNPPARIDMMKAIPGGDFAQAWATREVVDVGEVAVCLVGRRELIRLKRASGRPQDLIDADRLE 180          
BLAST of mRNA_P-wetherbeei_contig56941.1.1 vs. uniprot
Match: A0A3M1H3D7_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1H3D7_9CHLR)

HSP 1 Score: 92.4 bits (228), Expect = 1.520e-21
Identity = 45/103 (43.69%), Postives = 66/103 (64.08%), Query Frame = 1
Query:    1 LDLWIANDLENLEKIYNALVRFGAPRHILEDLAGLKPDEILFMGNPPVRVDFLQNVSGLNYANSYTRRKEVQWGDVPVVMVSLEDLIVSKRAAGRPQDLIDAN 309
            LDLWI+ D +N + +Y AL  FGAP   LE+    +      MG PP+RVD L  + G+ +  ++ +R+E+ +  + V  +S EDLI +KRA+GRPQDLIDA+
Sbjct:   41 LDLWISTDAQNAKAVYEALKEFGAPLVGLEEKDFAEEGYFYQMGVPPIRVDILMGIPGVEFEEAWKKREEIDFDGLVVPFISKEDLIKAKRASGRPQDLIDAD 143          
BLAST of mRNA_P-wetherbeei_contig56941.1.1 vs. uniprot
Match: A0A8I2K4W2_9BACT (Uncharacterized protein n=1 Tax=Candidatus Aminicenantes bacterium TaxID=2052149 RepID=A0A8I2K4W2_9BACT)

HSP 1 Score: 90.9 bits (224), Expect = 8.030e-21
Identity = 40/109 (36.70%), Postives = 71/109 (65.14%), Query Frame = 1
Query:    1 LDLWIANDLENLEKIYNALVRFGAPRHILEDLAGLKPDEILFMGNPPVRVDFLQNVSGLNYANSYTRRKEVQWGDVPVVMVSLEDLIVSKRAAGRPQDLIDANELENFD 327
            +D ++    EN +KI   L +FG  +  L +    +PD+I+  GNPP+R+D + ++SG+ + +++  ++E ++GD+P   +S+ DLI +K+A+GRPQD+ D   LE FD
Sbjct:   41 IDFFVEPSKENSQKIMETLRQFGFGKTGLTEEDFQEPDQIILFGNPPMRIDIITSISGVEFEDAWQNKEEGKYGDIPCFFISMADLIRNKKASGRPQDITDLKLLEKFD 149          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56941.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D5ZSS2_9BACT1.500e-3153.70Uncharacterized protein n=1 Tax=Gemmatimonadetes b... [more]
A0A4U1IL51_9DELT1.960e-2648.11Uncharacterized protein n=1 Tax=Polyangium fumosum... [more]
A0A3M1FJB0_9BACT3.000e-2446.90Uncharacterized protein n=1 Tax=Candidatus Parcuba... [more]
A0A1M3N156_9DELT1.340e-2341.51Uncharacterized protein n=1 Tax=Myxococcales bacte... [more]
A0A7Y4WG41_9BACT2.150e-2244.34Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
A0A800CHK5_9CHLR2.670e-2244.66Uncharacterized protein n=1 Tax=Anaerolineae bacte... [more]
A0A850BY48_9CHLR3.590e-2248.54Uncharacterized protein n=1 Tax=Anaerolineales bac... [more]
A0A520R2S0_9DELT4.430e-2244.76Uncharacterized protein n=2 Tax=Myxococcales TaxID... [more]
A0A3M1H3D7_9CHLR1.520e-2143.69Uncharacterized protein n=1 Tax=Chloroflexi bacter... [more]
A0A8I2K4W2_9BACT8.030e-2136.70Uncharacterized protein n=1 Tax=Candidatus Aminice... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig56941contigP-wetherbeei_contig56941:1..345 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog595460.RRSWK_07231
Model size345
Max annot lvl203682|Planctomycetes
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.97e-19
EggNOG OGsCOG4914@1|root,COG4914@2|Bacteria,2J4D4@203682|Planctomycetes
Cds size345
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186845.2047398-CDS-P-wetherbeei_contig56941:0..3451683186845.2047398-CDS-P-wetherbeei_contig56941:0..345Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig56941 1..345 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig56941.1.1prot_P-wetherbeei_contig56941.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig56941 1..345 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig56941.1.1

>prot_P-wetherbeei_contig56941.1.1 ID=prot_P-wetherbeei_contig56941.1.1|Name=mRNA_P-wetherbeei_contig56941.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=115bp
LDLWIANDLENLEKIYNALVRFGAPRHILEDLAGLKPDEILFMGNPPVRV
DFLQNVSGLNYANSYTRRKEVQWGDVPVVMVSLEDLIVSKRAAGRPQDLI
DANELENFDSLSEF*
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mRNA from alignment at P-wetherbeei_contig56941:1..345+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig56941.1.1 ID=mRNA_P-wetherbeei_contig56941.1.1|Name=mRNA_P-wetherbeei_contig56941.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=345bp|location=Sequence derived from alignment at P-wetherbeei_contig56941:1..345+ (Phaeothamnion wetherbeei SAG_119_79)
CTGGACCTTTGGATTGCCAATGATCTCGAAAATCTCGAGAAAATTTACAA TGCTCTAGTTAGATTTGGAGCACCCAGGCACATCTTAGAGGATCTCGCCG GATTGAAGCCTGATGAAATACTTTTTATGGGAAATCCGCCCGTGCGCGTC GATTTCCTGCAGAACGTATCGGGTCTGAATTATGCAAACTCCTACACGCG GCGCAAAGAAGTTCAATGGGGCGATGTGCCAGTGGTCATGGTCTCCCTGG AAGATTTAATCGTCTCAAAGAGAGCAGCGGGTCGCCCCCAGGACCTGATC GACGCAAACGAACTCGAAAATTTCGATTCTCTGTCCGAGTTTTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig56941:1..345+

>mRNA_P-wetherbeei_contig56941.1.1 ID=mRNA_P-wetherbeei_contig56941.1.1|Name=mRNA_P-wetherbeei_contig56941.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=345bp|location=Sequence derived from alignment at P-wetherbeei_contig56941:1..345+ (Phaeothamnion wetherbeei SAG_119_79)
CTGGACCTTTGGATTGCCAATGATCTCGAAAATCTCGAGAAAATTTACAA
TGCTCTAGTTAGATTTGGAGCACCCAGGCACATCTTAGAGGATCTCGCCG
GATTGAAGCCTGATGAAATACTTTTTATGGGAAATCCGCCCGTGCGCGTC
GATTTCCTGCAGAACGTATCGGGTCTGAATTATGCAAACTCCTACACGCG
GCGCAAAGAAGTTCAATGGGGCGATGTGCCAGTGGTCATGGTCTCCCTGG
AAGATTTAATCGTCTCAAAGAGAGCAGCGGGTCGCCCCCAGGACCTGATC
GACGCAAACGAACTCGAAAATTTCGATTCTCTGTCCGAGTTTTAG
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