mRNA_P-wetherbeei_contig56816.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig56816.1.1 vs. uniprot
Match: A0A6J4UDV8_9CHLR (Uncharacterized protein n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4UDV8_9CHLR) HSP 1 Score: 127 bits (319), Expect = 1.580e-33 Identity = 61/112 (54.46%), Postives = 82/112 (73.21%), Query Frame = 1
Query: 1 MIQSIVLDGLIVLIILMIAAIGYNRGGMRELCTAAGLLFGSRLADAWAPRWGAWVADRADLSDGAGTFIVYVAALTVVTLVCGYGAALAFFSRPGPGGRLYGAALGIVNGVV 336
M+QSIVLDGL++LI++++ +G+ RGGMRE+C+AAGLL +AD WA RWG W+ADR D+ G F+V VA LT+VT V GYGA F RPGPGGR+YG + ++ G +
Sbjct: 1 MVQSIVLDGLLLLILMLLLPLGFFRGGMREVCSAAGLLLALLIADEWADRWGRWIADRVDVRSGIAQFVVAVAVLTIVTAVVGYGAGAGFSYRPGPGGRIYGGLIALLIGAL 112
BLAST of mRNA_P-wetherbeei_contig56816.1.1 vs. uniprot
Match: A0A7V9AK14_9CHLR (CvpA family protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9AK14_9CHLR) HSP 1 Score: 126 bits (316), Expect = 4.880e-33 Identity = 60/112 (53.57%), Postives = 82/112 (73.21%), Query Frame = 1
Query: 1 MIQSIVLDGLIVLIILMIAAIGYNRGGMRELCTAAGLLFGSRLADAWAPRWGAWVADRADLSDGAGTFIVYVAALTVVTLVCGYGAALAFFSRPGPGGRLYGAALGIVNGVV 336
M+QSIVLD L++LI++++ +G+ RGGMRE+C+AAGLL G + + WA RWG+WVA R D+ G F+V V LT+VT + GYGAA F SRPGPGGR+YG + ++ G V
Sbjct: 1 MVQSIVLDALLLLILMLLVPLGFYRGGMREVCSAAGLLLGLLITNEWAERWGSWVASRVDVRTGVSQFVVAVTVLTLVTALVGYGAAAGFSSRPGPGGRMYGGLIALLTGAV 112
BLAST of mRNA_P-wetherbeei_contig56816.1.1 vs. uniprot
Match: A0A838GGA8_9CHLR (CvpA family protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A838GGA8_9CHLR) HSP 1 Score: 111 bits (278), Expect = 1.760e-27 Identity = 54/112 (48.21%), Postives = 78/112 (69.64%), Query Frame = 1
Query: 1 MIQSIVLDGLIVLIILMIAAIGYNRGGMRELCTAAGLLFGSRLADAWAPRWGAWVADRADLSDGAGTFIVYVAALTVVTLVCGYGAALAFFSRPGPGGRLYGAALGIVNGVV 336
M++S+ LD L++LI+L++ IG+ RGG+RE+C+AAG+L G +A W+ RWGAWVAD + +G F+V VA L + + GYGAA AF + P PGGRLYG + + GV+
Sbjct: 1 MVESLALDSLLILILLLLVPIGFYRGGLREVCSAAGVLLGLLVAQQWSARWGAWVADVTGIDEGISRFMVAVATLILFAALIGYGAASAFTASPSPGGRLYGGLIALAYGVL 112
BLAST of mRNA_P-wetherbeei_contig56816.1.1 vs. uniprot
Match: A0A7W0QRB0_9CHLR (CvpA family protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0QRB0_9CHLR) HSP 1 Score: 109 bits (273), Expect = 9.600e-27 Identity = 52/110 (47.27%), Postives = 77/110 (70.00%), Query Frame = 1
Query: 1 MIQSIVLDGLIVLIILMIAAIGYNRGGMRELCTAAGLLFGSRLADAWAPRWGAWVADRADLSDGAGTFIVYVAALTVVTLVCGYGAALAFFSRPGPGGRLYGAALGIVNG 330
M++S+ LD L++LI+L++ IG+ RGG+RE+C+AAG+L G +A W+PRWG+WVA + +G F+V +A L + + GYGAA AF S P PGGRLYG + + +G
Sbjct: 1 MLESLALDSLLILILLLLVPIGFYRGGLREVCSAAGVLLGLLVAQQWSPRWGSWVAGVTGIDEGISRFMVAMATLVLFAALIGYGAASAFTSSPSPGGRLYGGLVALASG 110
BLAST of mRNA_P-wetherbeei_contig56816.1.1 vs. uniprot
Match: A0A7W0STN8_9CHLR (CvpA family protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0STN8_9CHLR) HSP 1 Score: 107 bits (268), Expect = 5.210e-26 Identity = 53/112 (47.32%), Postives = 76/112 (67.86%), Query Frame = 1
Query: 1 MIQSIVLDGLIVLIILMIAAIGYNRGGMRELCTAAGLLFGSRLADAWAPRWGAWVADRADLSDGAGTFIVYVAALTVVTLVCGYGAALAFFSRPGPGGRLYGAALGIVNGVV 336
M++++ LD L++LI+L++ IG RGG+RE+C+AAG+L G +A WA RWG W+AD + DG F+V VA L + + GY AA AF PGPGGRLYG + + +GV+
Sbjct: 1 MLETLALDSLLILILLLLMPIGLYRGGLREVCSAAGVLLGLIVAQQWADRWGGWLADTTGIDDGVSRFMVAVAILVLFAGLIGYAAASAFAYSPGPGGRLYGGLIALASGVL 112
BLAST of mRNA_P-wetherbeei_contig56816.1.1 vs. uniprot
Match: A0A7W0AAZ2_9CHLR (CvpA family protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0AAZ2_9CHLR) HSP 1 Score: 101 bits (251), Expect = 1.510e-23 Identity = 49/112 (43.75%), Postives = 74/112 (66.07%), Query Frame = 1
Query: 1 MIQSIVLDGLIVLIILMIAAIGYNRGGMRELCTAAGLLFGSRLADAWAPRWGAWVADRADLSDGAGTFIVYVAALTVVTLVCGYGAALAFFSRPGPGGRLYGAALGIVNGVV 336
M++++ LD L++LI+L++ IG RGG+RE+C+AAG+L G +A W+ RWG W+A + DG F V VA + V + GYGA +F PGPGGR++G + + +GVV
Sbjct: 1 MLETLALDSLLILILLLLIPIGMYRGGLREVCSAAGVLLGLLVAMQWSDRWGGWLAGATGIDDGVARFAVAVATIVVFAGLLGYGATSSFAYSPGPGGRVFGGLIALASGVV 112
BLAST of mRNA_P-wetherbeei_contig56816.1.1 vs. uniprot
Match: A0A7W0A5B9_9CHLR (CvpA family protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0A5B9_9CHLR) HSP 1 Score: 96.3 bits (238), Expect = 7.930e-22 Identity = 54/112 (48.21%), Postives = 69/112 (61.61%), Query Frame = 1
Query: 1 MIQSIVLDGLIVLIILMIAAIGYNRGGMRELCTAAGLLFGSRLADAWAPRWGAWVADRADLSDGAGTFIVYVAALTVVTLVCGYGAALAFFSRPGPGGRLYGAALGIVNGVV 336
MI+SIVLD L++LI+ ++ AIG RGGMRE +A GLL G +A W WG W+A LSDG F+ V +T+ T+V GY AF PGPGGRL+G L G+V
Sbjct: 1 MIESIVLDILLMLIVFLMMAIGAYRGGMREAFSAGGLLLGVLVATEWLEPWGRWLARNTSLSDGGARFLAAVVTMTLFTVVVGYAVGSAFNYHPGPGGRLFGTVLAGGAGLV 112 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56816.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig56816.1.1 >prot_P-wetherbeei_contig56816.1.1 ID=prot_P-wetherbeei_contig56816.1.1|Name=mRNA_P-wetherbeei_contig56816.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=113bp MIQSIVLDGLIVLIILMIAAIGYNRGGMRELCTAAGLLFGSRLADAWAPRback to top mRNA from alignment at P-wetherbeei_contig56816:177..515+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig56816.1.1 ID=mRNA_P-wetherbeei_contig56816.1.1|Name=mRNA_P-wetherbeei_contig56816.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=339bp|location=Sequence derived from alignment at P-wetherbeei_contig56816:177..515+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig56816:177..515+ >mRNA_P-wetherbeei_contig56816.1.1 ID=mRNA_P-wetherbeei_contig56816.1.1|Name=mRNA_P-wetherbeei_contig56816.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=339bp|location=Sequence derived from alignment at P-wetherbeei_contig56816:177..515+ (Phaeothamnion wetherbeei SAG_119_79)back to top |