mRNA_P-wetherbeei_contig56681.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig56681.1.1
Unique NamemRNA_P-wetherbeei_contig56681.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig56681.1.1 vs. uniprot
Match: UPI001C3E630A (hypothetical protein n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3E630A)

HSP 1 Score: 112 bits (280), Expect = 2.150e-29
Identity = 68/109 (62.39%), Postives = 75/109 (68.81%), Query Frame = 1 
Query:    1 VVALMITRPATRRAGIEALCASVAAALAARALRDRLARPRPGAREGGGFPSRHAAASTAIATTISHRHPRLGHALGTAAALGMAARIATAEHDPADIGAGVALGLAAAH 327
            VVA M+ R  TR AG+ AL A   A+L ARALRDRL R RPGAR  GGFPSRHAAAS AIA      H R+G  L  A A G+ AR+A AEH+PADI AG ALGL AAH
Sbjct:   43 VVAAMVLRRPTRAAGLRALAAGAGASLVARALRDRLGRRRPGARADGGFPSRHAAASVAIAAAAGRDHARIGSGLAVATAAGLLARVADAEHEPADIVAGAALGLLAAH 151
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BLAST of mRNA_P-wetherbeei_contig56681.1.1 vs. uniprot
Match: A0A1Q7PCV5_9BACT (acidPPc domain-containing protein n=1 Tax=Candidatus Rokubacteria bacterium 13_1_40CM_2_68_8 TaxID=1805354 RepID=A0A1Q7PCV5_9BACT)

HSP 1 Score: 48.9 bits (115), Expect = 7.090e-5
Identity = 40/108 (37.04%), Postives = 58/108 (53.70%), Query Frame = 1 
Query:   34 RRAGIEALCASVAAALAARALRDRLARPRPGAREGG-----------GFPSRHAAASTAIATTISHRHPRLGHALGTAAALGMAARIATAEHDPADIGAGVALGLAAA 324
            RR G  AL A+  + +  + L+  +ARPRP    G             FPS HAAA+TA+ATT++  HP +   + T A +   +R+A   H  +D+ AGV +GLA A
Sbjct:   26 RRLGAAALLANAGSHVVVQLLKRAVARPRPCDASGAPLARVDLPDRHSFPSGHAAAATAVATTLAIAHPLVAPFVLTLAGVISYSRVALRVHHVSDVLAGVVVGLAGA 133
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56681.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
UPI001C3E630A2.150e-2962.39hypothetical protein n=1 Tax=Miltoncostaea oceani ... [more]
A0A1Q7PCV5_9BACT7.090e-537.04acidPPc domain-containing protein n=1 Tax=Candidat... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig56681contigP-wetherbeei_contig56681:15..341 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1137271.AZUM01000001_gene687
Preferred namebmrU
PFAMsDAGK_cat,PAP2
Model size327
Max annot lvl201174|Actinobacteria
KEGG rclassRC00002
KEGG koko:K19302
KEGG ReactionR05627
KEGG Pathwayko00550,map00550
Hectar predicted targeting categorymitochondrion
Exons1
Evalue0.000579
EggNOG OGsCOG0671@1|root,COG1597@1|root,COG0671@2|Bacteria,COG1597@2|Bacteria,2GM2U@201174|Actinobacteria,4DXZQ@85010|Pseudonocardiales
EC3.6.1.27
DescriptionDiacylglycerol kinase catalytic domain
Cds size315
COG categoryI
BRITEko00000,ko00001,ko01000,ko01011
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186841.942374-CDS-P-wetherbeei_contig56681:14..3291683186841.942374-CDS-P-wetherbeei_contig56681:14..329Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig56681 15..329 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186841.9549055-UTR-P-wetherbeei_contig56681:329..3411683186841.9549055-UTR-P-wetherbeei_contig56681:329..341Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig56681 330..341 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig56681.1.1prot_P-wetherbeei_contig56681.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig56681 15..329 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig56681.1.1

>prot_P-wetherbeei_contig56681.1.1 ID=prot_P-wetherbeei_contig56681.1.1|Name=mRNA_P-wetherbeei_contig56681.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=105bp
MITRPATRRAGIEALCASVAAALAARALRDRLARPRPGAREGGGFPSRHA
AASTAIATTISHRHPRLGHALGTAAALGMAARIATAEHDPADIGAGVALG
LAAAH
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mRNA from alignment at P-wetherbeei_contig56681:15..341-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig56681.1.1 ID=mRNA_P-wetherbeei_contig56681.1.1|Name=mRNA_P-wetherbeei_contig56681.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=327bp|location=Sequence derived from alignment at P-wetherbeei_contig56681:15..341- (Phaeothamnion wetherbeei SAG_119_79)
GTCGTGGCGCTGATGATCACCCGGCCCGCCACCCGACGCGCGGGGATCGA
GGCGCTCTGCGCATCGGTCGCCGCGGCCCTGGCGGCGCGCGCCCTCCGCG
ACCGCCTCGCTCGGCCCAGGCCAGGGGCACGCGAGGGAGGCGGCTTCCCC
AGCCGCCACGCGGCGGCATCGACGGCCATCGCGACCACGATTTCCCACCG
ACATCCGCGCCTCGGACACGCCCTCGGCACGGCCGCGGCGCTCGGCATGG
CGGCCCGCATCGCCACCGCAGAACACGACCCCGCCGACATCGGAGCAGGC
GTCGCCCTAGGCCTGGCGGCGGCACAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig56681:15..341-

>mRNA_P-wetherbeei_contig56681.1.1 ID=mRNA_P-wetherbeei_contig56681.1.1|Name=mRNA_P-wetherbeei_contig56681.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=315bp|location=Sequence derived from alignment at P-wetherbeei_contig56681:15..341- (Phaeothamnion wetherbeei SAG_119_79)
ATGATCACCCGGCCCGCCACCCGACGCGCGGGGATCGAGGCGCTCTGCGC
ATCGGTCGCCGCGGCCCTGGCGGCGCGCGCCCTCCGCGACCGCCTCGCTC
GGCCCAGGCCAGGGGCACGCGAGGGAGGCGGCTTCCCCAGCCGCCACGCG
GCGGCATCGACGGCCATCGCGACCACGATTTCCCACCGACATCCGCGCCT
CGGACACGCCCTCGGCACGGCCGCGGCGCTCGGCATGGCGGCCCGCATCG
CCACCGCAGAACACGACCCCGCCGACATCGGAGCAGGCGTCGCCCTAGGC
CTGGCGGCGGCACAC
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