mRNA_P-wetherbeei_contig5664.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5664.1.1
Unique NamemRNA_P-wetherbeei_contig5664.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5664.1.1 vs. uniprot
Match: D8LI42_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI42_ECTSI)

HSP 1 Score: 290 bits (742), Expect = 1.900e-81
Identity = 222/546 (40.66%), Postives = 270/546 (49.45%), Query Frame = 1
Query:   16 RWAGTQELLALLNGIPLESTRAPEQAAELLRDLVEAQAKMGGLVEEALQPDVRGDVCATLLTAAATG---HPSFAKLCVDAGLPSNLVHCLRIIRVIEFESAMEEQRLAAIXXXXXXXXXXXXXXXXXXXAAGNRSRSPTGGRDGDAPASPGDGGSGRGGATAAGAMVERHAPPRHPNATASAEAALAGVRKLTANATARVVQLLATVCAQGDASVGEQVKPHLSGLLSLAVSAYPPGGLYVQRAALEVVTALMDCCVSSSVVWLLHSRQVMQDVVGELRHLCGDDVAVPPGGDPSGAGXXXXXXXXXXXXAGAQHGVTRSPGTGSRSPRHSASGMDALGGGGGLGESGGADGPELVGLAAEAAGVWLTAMEATVCVITRSSRFVAAVVGDFEVAGGYDVLADMVGRSGEAHLPRMLEQVAALVSAQATGSVPIAMPPSGLSDATGTPSPRAMR--LLATNPPAFGIIRTLLLQRMPVLLAICKNSRGGXXXXXXXXXXXXXXXXVVHSVGGGGDADAPELEMMEMATLVAQKAVVMRLARWDRPH 1638
            RWAGT+ELL+LL+G         E   E  R + E QAKM  LVE+AL P+  GD+C  LL AA TG   HP+F KLCVDAGLPSNLVHCLRI+RV+EFESAM                                 R  TGG  G   A  G  G+G GG   A     R +P                 R  T  AT R+ +LL T+C+   A VGEQ+KPHL GLLSLAVSAYPP G +VQ  A  VV ALM  C++SS+VWLLH  + M DVVGELRHL G D   P    P   G                    RSPG                  GGG  ++      ELVG AAE +G+WL+A+ A V  +  SS FV A V DFE AGGY+ +  MV +S   HLP MLEQV  LVSA + G +          +   TP  R  R  L+A+N  AFGII++LL +  P + A+C    GG                 V  + GG       L+  +   +VA++AV MRL RW R H
Sbjct:  207 RWAGTEELLSLLDGGSPGGGGEVEDKVERYRSIAEVQAKMSDLVEQALVPESHGDLCGQLLDAA-TGVGHHPAFVKLCVDAGLPSNLVHCLRIMRVVEFESAM---------------------------------RDGTGGGGGTTAA--GSFGAGDGGDDEASGDEARPSPSLPEGDD----------RPQTKRATERIGKLLVTLCSDKSAGVGEQIKPHLPGLLSLAVSAYPPNGAHVQETARAVVEALMGGCLNSSMVWLLHYNKAMLDVVGELRHLSGLDGTAPKSPTP---GRKVVRGGYTPRSVSPMSKGKRSPGPAK---------------GGGRTDTNEPPSTELVGAAAEESGLWLSALRAAVSTVRSSSHFVPAFVQDFESAGGYETVGYMVRKSSIDHLPAMLEQVCLLVSATSAGGM----------ERLETPGGRVERSDLMASNSAAFGIIQSLLAECTPPVEAVCLQGIGGRVSSGTCE---------VSCLSGGHGLADQGLDTEDAVVMVAERAVAMRLDRWGREH 669          
BLAST of mRNA_P-wetherbeei_contig5664.1.1 vs. uniprot
Match: A0A6H5KQH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH9_9PHAE)

HSP 1 Score: 282 bits (721), Expect = 1.180e-78
Identity = 221/546 (40.48%), Postives = 271/546 (49.63%), Query Frame = 1
Query:   16 RWAGTQELLALLNGIPLESTRAPEQAAELLRDLVEAQAKMGGLVEEALQPDVRGDVCATLLTAAATG---HPSFAKLCVDAGLPSNLVHCLRIIRVIEFESAMEEQRLAAIXXXXXXXXXXXXXXXXXXXAAGNRSRSPTGGRDGDAPASPGDGGSGRGGATAAGAMVERHAPPRHPNATASAEAALAGVRKLTANATARVVQLLATVCAQGDASVGEQVKPHLSGLLSLAVSAYPPGGLYVQRAALEVVTALMDCCVSSSVVWLLHSRQVMQDVVGELRHLCGDDVAVPPGGDPSGAGXXXXXXXXXXXXAGAQHGVTRSPGTGSRSPRHSASGMDALGGGGGLGESGGADGPELVGLAAEAAGVWLTAMEATVCVITRSSRFVAAVVGDFEVAGGYDVLADMVGRSGEAHLPRMLEQVAALVSAQATGSVPIAMPPSGLSDATGTPSPRAMR--LLATNPPAFGIIRTLLLQRMPVLLAICKNSRGGXXXXXXXXXXXXXXXXVVHSVGGGGDADAPELEMMEMATLVAQKAVVMRLARWDRPH 1638
            RWAGT+ELL+LL+G         E   E  R + E QAKM  LVE+AL P+  GD+C  LL AA TG   HP+F KLCVDAGLPSNLVHCLRI+RV+EFESAM +              XXXXXXX    A       P+G     +P+ P D                                     R  T  AT R+ +LL T+C+   A VGEQ+KPHL GLLSLAVSAYPP G +VQ  A  VV ALM  C++SS+VWLLH  + MQDVVGELRHL G D   P    P   G                    RSPG                  GGG  ++      ELVG AAE +G+WL+A+ A V  +  SS FV A V DFE AGGY+ +  MV +S    LP MLEQV  LVSA + G +          +   TP  R  R  L+A+N  AFGII++LL +  P + A+C    GG                 V  + GG       L+  +   +VA++AV MRL RW R H
Sbjct:  260 RWAGTEELLSLLDGGSPGGGGEVEDKVERYRSIAEVQAKMSDLVEQALVPESHGDLCGQLLDAA-TGVGHHPAFVKLCVDAGLPSNLVHCLRIMRVVEFESAMRD----------GTGGXXXXXXXGSFGAGDGGDDEPSGDEARPSPSLPED-----------------------------------DDRPQTKRATERIGKLLVTLCSDKSAGVGEQIKPHLPGLLSLAVSAYPPNGAHVQETARTVVEALMGGCLNSSMVWLLHYNKAMQDVVGELRHLGGLDGTAPKLPTP---GRKVVRGGYTPRSVSPMSKGKRSPGPAK---------------GGGRTDNNEPPSTELVGAAAEESGLWLSALRAAVSTVRSSSHFVPAFVQDFESAGGYETVGYMVRKSSIDRLPAMLEQVCLLVSATSAGGM----------ERLETPGGRVERSDLMASNSAAFGIIQSLLAECTPPVEAVCLQGIGGRVSSGTCE---------VSCLSGGYGLADQGLDTEDAVVMVAERAVAMRLDRWGREH 722          
BLAST of mRNA_P-wetherbeei_contig5664.1.1 vs. uniprot
Match: A0A7S1YSP2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YSP2_9STRA)

HSP 1 Score: 113 bits (282), Expect = 5.860e-24
Identity = 91/302 (30.13%), Postives = 140/302 (46.36%), Query Frame = 1
Query:  595 ATARVVQLLATVCAQGDASVGEQVKPHLSGLLSLAVSAYPPGGLYVQRAALEVVTALMDCCVSSSVVWLLHSRQVMQDVVGELRHLCGDDVAVPPGGDPSGAGXXXXXXXXXXXXAGAQHGVTRSPGTGSRSPRHSASGMDALGGGGGLGESGGADGPELVGLAAEAAGVWLTAMEATVCVITRSSRFVAA-VVGDFEVAGGYDVLADMVGRSGEAHLPRMLEQVAALVSAQATGSVPIAMPPSGLSDA---TGTPSPRAMRL--------LATNPPAFGIIRTLLLQRMPVLLAICKNSRG 1464
            ATA+V +LL  +C+  D SVGEQ++PHL GLL+L+ ++YPP G+++  AA  V+ +  + C+S+S+VW LH R+++  +  +++ LCG                                    SP + +R                            L G AAE AG+W+ A+   V ++T S  +    ++ DF+ AGGY VL   +  S   HLPRMLE VA LV  +     P +      SD    T  PS +  +         +ATNP AF I+  L+++ +P L A  +   G
Sbjct:    4 ATAKVTRLLCLLCS--DPSVGEQLRPHLFGLLALSGASYPPSGIHIASAASSVILSFSENCLSASLVWFLHDRKMIVHMTDDIKELCGMT-------------------------------AVSSPSSATRC---------------------------LYGEAAEHAGLWVVALRTVVNLVTHSCNYQCLELLKDFDAAGGYHVLCYGILNSSPEHLPRMLELVATLVCCRT--DAPSSNSSLAASDGIHGTSLPSDQITQNNKDIDTEHIATNPDAFEIVEDLMVRSVPFLAAYVEAHSG 243          
BLAST of mRNA_P-wetherbeei_contig5664.1.1 vs. uniprot
Match: A0A7S4S7R3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S7R3_9STRA)

HSP 1 Score: 113 bits (282), Expect = 3.540e-22
Identity = 91/302 (30.13%), Postives = 140/302 (46.36%), Query Frame = 1
Query:  595 ATARVVQLLATVCAQGDASVGEQVKPHLSGLLSLAVSAYPPGGLYVQRAALEVVTALMDCCVSSSVVWLLHSRQVMQDVVGELRHLCGDDVAVPPGGDPSGAGXXXXXXXXXXXXAGAQHGVTRSPGTGSRSPRHSASGMDALGGGGGLGESGGADGPELVGLAAEAAGVWLTAMEATVCVITRSSRFVAA-VVGDFEVAGGYDVLADMVGRSGEAHLPRMLEQVAALVSAQATGSVPIAMPPSGLSDA---TGTPSPRAMRL--------LATNPPAFGIIRTLLLQRMPVLLAICKNSRG 1464
            ATA+V +LL  +C+  D SVGEQ++PHL GLL+L+ ++YPP G+++  AA  V+ +  + C+S+S+VW LH R+++  +  +++ LCG                                    SP + +R                            L G AAE AG+W+ A+   V ++T S  +    ++ DF+ AGGY VL   +  S   HLPRMLE VA LV  +     P +      SD    T  PS +  +         +ATNP AF I+  L+++ +P L A  +   G
Sbjct:   92 ATAKVARLLCLLCS--DPSVGEQLRPHLFGLLALSGASYPPSGIHIASAASSVILSFSENCLSASLVWFLHDRKMIVHMTDDIKELCGMT-------------------------------AVSSPSSATRC---------------------------LYGEAAEHAGLWVVALRTVVNLVTHSCNYQCLELLKDFDAAGGYHVLCYGILNSSPEHLPRMLELVATLVCCRT--DAPSSNSSLAASDGIHGTSLPSDQITQNNKDIDTEHIATNPDAFEIVEDLMVRSVPFLAAYVEAHSG 331          
BLAST of mRNA_P-wetherbeei_contig5664.1.1 vs. uniprot
Match: A0A1E7FHH9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FHH9_9STRA)

HSP 1 Score: 101 bits (252), Expect = 8.640e-19
Identity = 84/300 (28.00%), Postives = 138/300 (46.00%), Query Frame = 1
Query:  574 VRKLTANATARVVQLLATVCAQGDASVGEQVKPHLSGLLSLAVSAYPPGGLYVQRAALEVVTALMDCCVSSSVVWLLHSRQVMQDVVGELRHLCGDDVAVPPGGDPSGAGXXXXXXXXXXXXAGAQHGVTRSPGTGSRSPRHSASGMDALGGGGGLGESGGADGPELVGLAAEAAGVWLTAMEATVCVITRSSRFVA-AVVGDFEVAGGYDVLADMVGRSGEAHLPRMLEQVAALVSAQATGSVPIAMPP-SGLSDATGTPSPRAMRL-LATNPPAFGIIRTLLLQRMPVLLAICKNSRG 1464
            ++ +++ AT +V QLL T+C   D SVGEQ++PHL GLL+L+ ++YP  G++V +AA +V+ A    C+S+S+VW LH R+++  +  +++ LCG                                       T       +AS                     L G  AEAAG+W  ++   V ++  S R     ++ DFE A GY VL   + +S   H  +++E +  L + Q+T          +  +D  G  + +   L LA+NP AF II  L+ Q +P+L    + + G
Sbjct:  136 IKPISSRATGKVSQLLCTLCT--DQSVGEQLRPHLFGLLALSGASYPRSGVHVAKAASQVIIAFAQYCLSNSLVWFLHDRKMITHMTDDIKELCGQTTT-----------------------------------TNXXXXXXNAS--------------------SLYGTDAEAAGLWAISLSTVVHLVYYSCRHDCHELMNDFEAAKGYQVLKTAILQSKSMHGKKLMELLPLLATCQSTTXXXXXXXDITAATDKGGKENTKIEDLKLASNPAAFDIIEDLMYQVVPMLRMYVEENNG 378          
BLAST of mRNA_P-wetherbeei_contig5664.1.1 vs. uniprot
Match: A0A7S1CTZ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CTZ4_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 1.810e-18
Identity = 83/298 (27.85%), Postives = 143/298 (47.99%), Query Frame = 1
Query:  583 LTANATARVVQLLATVCAQGDASVGEQVKPHLSGLLSLAVSAYPPGGLYVQRAALEVVTALMDCCVSSSVVWLLHSRQVMQDVVGELRHLCGDDVAVPPGGDPSGAGXXXXXXXXXXXXAGAQHGVTRSPGTGSRSPRHSASGMDALGGGGGLGESGGADGPELVGLAAEAAGVWLTAMEATVCVITRSSRFVAA-VVGDFEVAGGYDVLADMVGRSGEAHLPRMLEQVAALVSAQ--ATGSVPIAMPPSG--------LSDATGTPSPRAMRLLATNPPAFGIIRTLLLQRMPVLLA 1443
            L+  A A+V +LL  +C+  D SVGEQ++PHL GLL+L+ ++YP  G+++  AA +V+ A    C+S+S+VW LH R+++  +  +++ LC                                  +T S  +   S  +S+SG +                  L G  AE  G+W+ A+   V +++ S  +    ++ D++ AGGY VLA  +  S   H+P++LE V ALV  +  AT S   + P S         L++     +  A   +A N  AF I+  L+++ + +++A
Sbjct:   11 LSTQAAAKVSKLLCLLCS--DPSVGEQLRPHLFGLLALSGASYPNSGVHIAAAASDVILAFSRSCLSASLVWFLHDRKMIVHMTDDIKELCA---------------------------------MTGSGPSSPSSSNNSSSGNNRC----------------LYGKDAEEKGLWVIAIRTVVHLVSNSCHYQCVELLKDYDSAGGYHVLAYAISNSSMKHVPKLLELVTALVCCKIGATSSAMSSTPSSQEHLQDEGMLANYNDDSTDLAEAKMAMNTNAFEIMDDLMIRSLKLIVA 257          
BLAST of mRNA_P-wetherbeei_contig5664.1.1 vs. uniprot
Match: A0A7S3Q415_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q415_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 6.600e-18
Identity = 88/314 (28.03%), Postives = 143/314 (45.54%), Query Frame = 1
Query:  574 VRKLTANATARVVQLLATVCAQGDASVGEQVKPHLSGLLSLAVSAYPPGGLYVQRAALEVVTALMDCCVSSSVVWLLHSRQVMQDVVGELRHLCGDDVAVPPGGDPSGAGXXXXXXXXXXXXAGAQHGVTRSPGTGSRSPRHSASGMDALGGGGGLGESGGADGPELVGLAAEAAGVWLTAMEATVCVITRSSRFVAA-VVGDFEVAGGYDVLADMVGRSGEAHLPRMLEQVAALV---------------SAQATGSVPIAMPPSGLSDATGTPSPRAMRLLATNPPAFGIIRTLLLQRMPVLLAICKNSRGG 1467
            VR ++  AT +V +LL+ +C  GDASVGEQ++PHL GLL+L+ + YP  G++V RAA +V+ +    C+S+S+VW LH R ++  +  +++ LCG   A                                S  T S +                             G  AE  G+W+ A+ A V ++ +S     + ++ DFE AGGY VL   +  SG +HL ++L+   A++               ++ AT      +   G SD+   P      L+ TNP AF +I  L+ Q +P+L+   +++  G
Sbjct:  282 VRSVSKAATEKVQKLLSLLC--GDASVGEQLRPHLFGLLALSGARYPINGVHVARAASKVIVSFSKGCLSTSLVWFLHDRNMIVHMTDDVKELCGMTAAA------------------------------ASSNTASLT---------------------------FCGKEAECHGLWIYALTAIVYMVKQSCLCKCSELLKDFEAAGGYHVLRYAMANSGRSHLKKLLKLTVAIMYCKVESPDDNXXXXXTSLATADYTDTL---GQSDSLNAPVINEEHLV-TNPSAFDVIEDLMDQSIPLLVMHRQDNESG 532          
BLAST of mRNA_P-wetherbeei_contig5664.1.1 vs. uniprot
Match: B5Y3B7_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y3B7_PHATC)

HSP 1 Score: 91.7 bits (226), Expect = 1.420e-15
Identity = 63/214 (29.44%), Postives = 101/214 (47.20%), Query Frame = 1
Query:  217 HPSFAKLCVDAGLPSNLVHCLRIIRVIEFESAMEEQRLAAIXXXXXXXXXXXXXXXXXXXAAGNRSRSPTGGRDGDAPASPGDGGSGRGGATAAGAMVERHAPPRHPNATASAEAALAGVRKLTANATARVVQLLATVCAQGDASVGEQVKPHLSGLLSLAVSAYPPGGLYVQRAALEVVTALMDCCVSSSVVWLLHSRQVMQDVVGELRHLCG 858
            H  F   CV+  LP NLVHCLR++RV+E + A  E   A                     +  N                        G A  A    ++H    +P     ++ + A ++ +   AT +V +LL  +C   D SVGEQ++PHL GL +L+ ++YPP GL+V  AA +V+ A  + C++  +VW +H R+++  +  ++R LCG
Sbjct:  148 HEKFVLRCVENELPPNLVHCLRLLRVLELQHASGEVENAK------------ESQVTKHDSVENEE----------------------GTADEAMEKEDQHQEEENPVGEIESDTSSAVLQPIGLVATQKVSKLLCQLCR--DPSVGEQLRPHLFGLFALSGASYPPSGLHVALAASDVIVAFSEHCLNRQLVWFIHDRKMILHMTDDVRELCG 325          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5664.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LI42_ECTSI1.900e-8140.66Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KQH9_9PHAE1.180e-7840.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1YSP2_9STRA5.860e-2430.13Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S4S7R3_9STRA3.540e-2230.13Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1E7FHH9_9STRA8.640e-1928.00Uncharacterized protein (Fragment) n=1 Tax=Fragila... [more]
A0A7S1CTZ4_9STRA1.810e-1827.85Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S3Q415_9STRA6.600e-1828.03Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
B5Y3B7_PHATC1.420e-1529.44Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5664contigP-wetherbeei_contig5664:3..1782 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LI42
Model size1781
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.12e-82
EggNOG OGs2E8XM@1|root,2SFC4@2759|Eukaryota
Cds size1779
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186841.5573618-CDS-P-wetherbeei_contig5664:2..17811683186841.5573618-CDS-P-wetherbeei_contig5664:2..1781Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5664 3..1781 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5664.1.1prot_P-wetherbeei_contig5664.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5664 3..1781 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5664.1.1

>prot_P-wetherbeei_contig5664.1.1 ID=prot_P-wetherbeei_contig5664.1.1|Name=mRNA_P-wetherbeei_contig5664.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=593bp
AAAVQRWAGTQELLALLNGIPLESTRAPEQAAELLRDLVEAQAKMGGLVE
EALQPDVRGDVCATLLTAAATGHPSFAKLCVDAGLPSNLVHCLRIIRVIE
FESAMEEQRLAAIAAAVAAATAAVGGAGTAGPAAGNRSRSPTGGRDGDAP
ASPGDGGSGRGGATAAGAMVERHAPPRHPNATASAEAALAGVRKLTANAT
ARVVQLLATVCAQGDASVGEQVKPHLSGLLSLAVSAYPPGGLYVQRAALE
VVTALMDCCVSSSVVWLLHSRQVMQDVVGELRHLCGDDVAVPPGGDPSGA
GGSGGGSGGGWGGAGAQHGVTRSPGTGSRSPRHSASGMDALGGGGGLGES
GGADGPELVGLAAEAAGVWLTAMEATVCVITRSSRFVAAVVGDFEVAGGY
DVLADMVGRSGEAHLPRMLEQVAALVSAQATGSVPIAMPPSGLSDATGTP
SPRAMRLLATNPPAFGIIRTLLLQRMPVLLAICKNSRGGGKGGGSAGSGG
GGGRAVVHSVGGGGDADAPELEMMEMATLVAQKAVVMRLARWDRPHAKPT
ASDEAALISPMAGGGAPPSPGGDRRPLSWRSPPSPAAAAAAAA
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mRNA from alignment at P-wetherbeei_contig5664:3..1782+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5664.1.1 ID=mRNA_P-wetherbeei_contig5664.1.1|Name=mRNA_P-wetherbeei_contig5664.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1780bp|location=Sequence derived from alignment at P-wetherbeei_contig5664:3..1782+ (Phaeothamnion wetherbeei SAG_119_79)
GCCGCCGCCGTGCAGCGGTGGGCGGGGACCCAAGAGCTGTTGGCGCTGCT CAATGGCATCCCGCTCGAGAGCACCCGAGCGCCGGAGCAGGCGGCTGAGC TGCTCCGCGACCTGGTCGAGGCGCAGGCGAAGATGGGCGGGCTTGTGGAG GAGGCGCTGCAGCCGGATGTCCGCGGCGACGTCTGCGCCACGCTGCTCAC AGCCGCTGCCACCGGCCACCCGTCCTTTGCCAAGCTCTGCGTTGACGCCG GACTGCCGTCCAACCTGGTGCACTGCCTTCGGATCATCCGTGTCATAGAG TTTGAGAGCGCCATGGAGGAGCAGCGCCTCGCCGCTATTGCGGCGGCTGT GGCGGCAGCGACAGCGGCGGTGGGAGGGGCGGGGACCGCCGGCCCGGCTG CGGGAAATCGCAGCCGCAGTCCTACCGGCGGTCGCGACGGCGACGCTCCA GCCTCCCCCGGCGACGGCGGCAGCGGCCGTGGCGGCGCCACAGCAGCAGG AGCAATGGTAGAGCGGCATGCGCCACCCCGGCACCCGAATGCGACCGCGT CGGCGGAGGCCGCCCTCGCCGGCGTCCGCAAGCTAACCGCCAACGCCACG GCGCGGGTCGTCCAGCTGCTGGCGACGGTGTGCGCTCAGGGCGACGCCAG CGTCGGCGAGCAGGTCAAGCCGCACCTCTCGGGGCTGCTGAGCCTCGCCG TCAGCGCCTACCCGCCGGGCGGGCTCTACGTGCAGCGGGCGGCGCTCGAA GTCGTGACGGCGCTGATGGACTGCTGCGTCTCGTCGAGCGTCGTTTGGCT GCTGCATTCGCGGCAGGTTATGCAGGACGTCGTGGGGGAGCTACGGCACC TCTGCGGCGACGACGTGGCGGTACCGCCGGGCGGCGACCCCAGCGGCGCC GGAGGCAGCGGCGGCGGCAGCGGCGGCGGTTGGGGTGGCGCGGGGGCGCA GCATGGTGTCACTCGATCTCCCGGCACGGGGTCGCGATCGCCGCGGCATT CGGCATCGGGGATGGATGCATTGGGCGGCGGCGGCGGCTTGGGGGAAAGC GGCGGCGCGGATGGCCCGGAGCTGGTGGGCCTGGCGGCGGAGGCGGCGGG CGTGTGGCTGACGGCTATGGAGGCCACAGTGTGCGTGATCACGCGCTCCA GCCGCTTCGTGGCGGCCGTGGTGGGCGACTTCGAGGTGGCGGGCGGCTAC GACGTCCTGGCGGACATGGTGGGCCGCTCTGGCGAGGCGCACCTGCCACG GATGCTGGAGCAGGTGGCGGCGCTTGTGTCAGCACAGGCGACGGGCTCCG TCCCGATCGCGATGCCGCCGAGCGGCCTCAGCGACGCCACCGGCACGCCG TCGCCGCGCGCCATGCGGCTGCTGGCCACGAACCCGCCGGCGTTCGGCAT CATCCGAACGCTGCTGCTCCAGCGGATGCCTGTGCTGCTGGCCATTTGCA AGAACAGTCGCGGCGGCGGTAAAGGCGGCGGCAGCGCTGGCAGCGGCGGC GGCGGCGGCAGAGCGGTTGTACATTCCGTTGGCGGTGGGGGTGATGCGGA CGCCCCTGAACTTGAAATGATGGAAATGGCCACCCTCGTGGCACAGAAGG CCGTGGTCATGCGGCTGGCCAGATGGGACAGACCGCACGCCAAGCCGACG GCGAGCGACGAGGCGGCGCTGATCTCCCCGATGGCGGGCGGCGGCGCGCC GCCGTCGCCAGGTGGCGACAGGCGACCGCTCAGCTGGCGCAGCCCGCCTA GCCCAGCCGCCGCGGCCGCTGCCGCAGCCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5664:3..1782+

>mRNA_P-wetherbeei_contig5664.1.1 ID=mRNA_P-wetherbeei_contig5664.1.1|Name=mRNA_P-wetherbeei_contig5664.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1779bp|location=Sequence derived from alignment at P-wetherbeei_contig5664:3..1782+ (Phaeothamnion wetherbeei SAG_119_79)
GCCGCCGCCGTGCAGCGGTGGGCGGGGACCCAAGAGCTGTTGGCGCTGCT
CAATGGCATCCCGCTCGAGAGCACCCGAGCGCCGGAGCAGGCGGCTGAGC
TGCTCCGCGACCTGGTCGAGGCGCAGGCGAAGATGGGCGGGCTTGTGGAG
GAGGCGCTGCAGCCGGATGTCCGCGGCGACGTCTGCGCCACGCTGCTCAC
AGCCGCTGCCACCGGCCACCCGTCCTTTGCCAAGCTCTGCGTTGACGCCG
GACTGCCGTCCAACCTGGTGCACTGCCTTCGGATCATCCGTGTCATAGAG
TTTGAGAGCGCCATGGAGGAGCAGCGCCTCGCCGCTATTGCGGCGGCTGT
GGCGGCAGCGACAGCGGCGGTGGGAGGGGCGGGGACCGCCGGCCCGGCTG
CGGGAAATCGCAGCCGCAGTCCTACCGGCGGTCGCGACGGCGACGCTCCA
GCCTCCCCCGGCGACGGCGGCAGCGGCCGTGGCGGCGCCACAGCAGCAGG
AGCAATGGTAGAGCGGCATGCGCCACCCCGGCACCCGAATGCGACCGCGT
CGGCGGAGGCCGCCCTCGCCGGCGTCCGCAAGCTAACCGCCAACGCCACG
GCGCGGGTCGTCCAGCTGCTGGCGACGGTGTGCGCTCAGGGCGACGCCAG
CGTCGGCGAGCAGGTCAAGCCGCACCTCTCGGGGCTGCTGAGCCTCGCCG
TCAGCGCCTACCCGCCGGGCGGGCTCTACGTGCAGCGGGCGGCGCTCGAA
GTCGTGACGGCGCTGATGGACTGCTGCGTCTCGTCGAGCGTCGTTTGGCT
GCTGCATTCGCGGCAGGTTATGCAGGACGTCGTGGGGGAGCTACGGCACC
TCTGCGGCGACGACGTGGCGGTACCGCCGGGCGGCGACCCCAGCGGCGCC
GGAGGCAGCGGCGGCGGCAGCGGCGGCGGTTGGGGTGGCGCGGGGGCGCA
GCATGGTGTCACTCGATCTCCCGGCACGGGGTCGCGATCGCCGCGGCATT
CGGCATCGGGGATGGATGCATTGGGCGGCGGCGGCGGCTTGGGGGAAAGC
GGCGGCGCGGATGGCCCGGAGCTGGTGGGCCTGGCGGCGGAGGCGGCGGG
CGTGTGGCTGACGGCTATGGAGGCCACAGTGTGCGTGATCACGCGCTCCA
GCCGCTTCGTGGCGGCCGTGGTGGGCGACTTCGAGGTGGCGGGCGGCTAC
GACGTCCTGGCGGACATGGTGGGCCGCTCTGGCGAGGCGCACCTGCCACG
GATGCTGGAGCAGGTGGCGGCGCTTGTGTCAGCACAGGCGACGGGCTCCG
TCCCGATCGCGATGCCGCCGAGCGGCCTCAGCGACGCCACCGGCACGCCG
TCGCCGCGCGCCATGCGGCTGCTGGCCACGAACCCGCCGGCGTTCGGCAT
CATCCGAACGCTGCTGCTCCAGCGGATGCCTGTGCTGCTGGCCATTTGCA
AGAACAGTCGCGGCGGCGGTAAAGGCGGCGGCAGCGCTGGCAGCGGCGGC
GGCGGCGGCAGAGCGGTTGTACATTCCGTTGGCGGTGGGGGTGATGCGGA
CGCCCCTGAACTTGAAATGATGGAAATGGCCACCCTCGTGGCACAGAAGG
CCGTGGTCATGCGGCTGGCCAGATGGGACAGACCGCACGCCAAGCCGACG
GCGAGCGACGAGGCGGCGCTGATCTCCCCGATGGCGGGCGGCGGCGCGCC
GCCGTCGCCAGGTGGCGACAGGCGACCGCTCAGCTGGCGCAGCCCGCCTA
GCCCAGCCGCCGCGGCCGCTGCCGCAGCC
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