mRNA_P-wetherbeei_contig56564.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig56564.1.1
Unique NamemRNA_P-wetherbeei_contig56564.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig56564.1.1 vs. uniprot
Match: UPI0019B88BED (Uncharacterized protein n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019B88BED)

HSP 1 Score: 145 bits (366), Expect = 3.530e-37
Identity = 82/176 (46.59%), Postives = 110/176 (62.50%), Query Frame = 1
Query:    1 IALRLMPWANAALNNFVSLDWGYDDASVRQFDHDTAAHLPARLLRPIEGRDGLAAERYGWLMKNAREAWIAWRCERVAQLHGRVLDRIRRARPDLRLFASVF-AWGPQGTLEELRQAGIDPARLQRIDGLTLINAQYTYGRRDPDAAHNERQLRRLTD----PGPLAML--AGAPG 507
            ++LRLM WAN ALNNF SLDWGYDD +V +F  +    +P      +E   G  A RY W+M NA+  WI WRCE++A+L+ R  +R+RRARPDL+L+++VF A+  +     LR+AGIDP RL RI G+ L+N+ + YGRR     + ER  +   D    P  L  L  AGAPG
Sbjct:  607 VSLRLMQWANPALNNFQSLDWGYDDYTVGRFVAERGIAVPMG----VETDTGRHAARYRWIMANAKADWIDWRCEKIAELYARAANRLRRARPDLQLYSTVFDAYPSEHGAGWLREAGIDPVRLARIPGVVLVNSLHAYGRR-----YEERTTQGTRDNLLVPEVLNALRPAGAPG 773          
BLAST of mRNA_P-wetherbeei_contig56564.1.1 vs. uniprot
Match: A0A7V3AE32_9BACT (LamGL domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V3AE32_9BACT)

HSP 1 Score: 132 bits (331), Expect = 1.830e-32
Identity = 76/173 (43.93%), Postives = 107/173 (61.85%), Query Frame = 1
Query:    1 IALRLMPWANAALNNFVSLDWGYDDASVRQFDHDTAAHLPARLLRPIEGRDGLAAERYGWLMKNAREAWIAWRCERVAQLHGRVLDRIRRARPDLRLFASVFAWGPQGTLEELRQAGIDPARLQRIDGLTLINAQYTYGRR--DPDAAHNERQLR-RLTDPGPLAMLAGAPGQ 510
            ++LRLM WAN ALNNF SLDWGYDD +V  F+ +T        ++P + R    + R+ WLM NARE WI WRCE++AQL     DR+R++RPDL+++A+       G L+  R++GIDP RL  +DG+ L+NA++ YGRR    +    +  +R  L DP  LA   G  G+
Sbjct:  584 VSLRLMGWANPALNNFHSLDWGYDDLTVGLFEKETGLRTG---VKPDDPRR--FSLRHEWLMANAREKWIDWRCEKIAQLFAAARDRVRQSRPDLKVYANHC-----GDLD--RESGIDPQRLGALDGVVLVNARHGYGRRAYTYEGYLADTVMRWNLLDPAALASTRGPDGR 744          
BLAST of mRNA_P-wetherbeei_contig56564.1.1 vs. uniprot
Match: A0A848AXL5_9BACT (Uncharacterized protein n=1 Tax=Victivallis vadensis TaxID=172901 RepID=A0A848AXL5_9BACT)

HSP 1 Score: 118 bits (295), Expect = 1.270e-27
Identity = 68/160 (42.50%), Postives = 92/160 (57.50%), Query Frame = 1
Query:    1 IALRLMPWANAALNNFVSLDWGYDDASVRQFDHDTAAHLPARLLRPIEGRDGLAAERYGWLMKNAREAWIAWRCERVAQLHGRVLDRIRRARPDLRLFASVFAWGPQGTLEELRQAGIDPARLQRIDGLTLINAQYTYGRRDPDAAHNERQLRRLTDPGP 480
            I+LR M WAN ALNNF SLDWGYDD +V +F+ +T   LP +   P   R  L   R+  LMK+ R+ WI WRCE++A+L+  +   +R+ARPDL L+      G          AG+DP RL  IDG+ + +   +YGRR     + ER L+ L  P P
Sbjct:  567 ISLRNMQWANPALNNFHSLDWGYDDFTVGEFERETGIRLPVKADDP--DRFEL---RHAELMKHHRDRWIDWRCEKIAELYRELAGILRQARPDLSLYVETMERG----------AGVDPGRLAAIDGVVVFSGS-SYGRRGRGENNRERFLQMLLKPEP 710          
BLAST of mRNA_P-wetherbeei_contig56564.1.1 vs. uniprot
Match: UPI001AE629B8 (hypothetical protein n=1 Tax=Neorhizobium galegae TaxID=399 RepID=UPI001AE629B8)

HSP 1 Score: 111 bits (278), Expect = 2.340e-25
Identity = 65/169 (38.46%), Postives = 89/169 (52.66%), Query Frame = 1
Query:    1 IALRLMPWANAALNNFVSLDWGYDDASVRQFDHDTAAHLPARLLRPIEGRDGLAAERYGWLMKNAREAWIAWRCERVAQLHGRVLDRIRRARPDLRLFASVFAWG--PQGTLEELRQAGIDPARLQRIDGLTLINAQYTYGRRDPDAAHNERQLRRLTDPGPLAMLAGA 501
            + LR+  W N++LNNFVSL+WGYD A+V +F HDT    PA L    +  DG  A RY  L    R  W+ WRC ++  +   +   +R  RPDL +  +V A G   Q   EELR+ GID   L  I GL LI+ +++YG ++   A           P  L+ LA A
Sbjct:  579 VQLRVSQWVNSSLNNFVSLEWGYDAATVSRFFHDTGLVPPAGLDLSNDTPDGAHA-RYAILTGKFRARWVTWRCVQIRDIFADITAAVRAIRPDLTVSINVSAMGHGQQPGYEELREIGIDSILLAAIPGLHLIDGRFSYGNKESGTAWQNYLRTAALAPDALSALAPA 746          
BLAST of mRNA_P-wetherbeei_contig56564.1.1 vs. uniprot
Match: A0A1G1C507_9BACT (Uncharacterized protein n=1 Tax=Lentisphaerae bacterium RIFOXYB12_FULL_65_16 TaxID=1798581 RepID=A0A1G1C507_9BACT)

HSP 1 Score: 110 bits (274), Expect = 8.360e-25
Identity = 58/141 (41.13%), Postives = 84/141 (59.57%), Query Frame = 1
Query:    1 IALRLMPWANAALNNFVSLDWGYDDASVRQFDHDTAAHLPARLLRPIEGRDGLAAERYGWLMKNAREAWIAWRCERVAQLHGRVLDRIRRARPDLRLFASVFAWGPQGTLEELRQAGIDPARLQRIDGLTLINAQYTYGRR 423
            + LR M WAN AL NF SLDWGY+D +V  F+ +T   +P     P  GR G   +R+ WL+ NAR+ W+ WRC+++  L  R   R+R+ARPDL++  + F            + G+D ARL  IDG++++N   +YGRR
Sbjct:  581 VCLRQMEWANPALWNFHSLDWGYEDFTVGLFEKETGVTVPVAGDAP--GRFG---KRHAWLLANARDRWVTWRCDKIVDLFTRTAQRVRQARPDLQVLTNRFDV----------ERGVDNARLAAIDGVSVVNGA-SYGRR 705          
BLAST of mRNA_P-wetherbeei_contig56564.1.1 vs. uniprot
Match: A0A2M7A7J0_9BACT (Uncharacterized protein n=1 Tax=Armatimonadetes bacterium CG07_land_8_20_14_0_80_59_28 TaxID=1973917 RepID=A0A2M7A7J0_9BACT)

HSP 1 Score: 98.6 bits (244), Expect = 8.890e-21
Identity = 57/150 (38.00%), Postives = 87/150 (58.00%), Query Frame = 1
Query:    1 IALRLMPWANAALNNFVSLDWGYDDASVRQFDHDTAAHLPARLLRPIEGRDGLAAERYGWLMKNA-REAWIAWRCERVAQLHGRVLDRIRRARPDLRLFASVFAWG---PQGTL-----EELRQAGIDPARLQRIDGLTLINAQYTYGRR 423
            ++ RLM W   + N   SL+WGY+D ++ QF+ +T   +P     P        A R+ +L  +A +E W++WRC +V  LH R+ DRIR+A+P  +L+ + +  G   P G+L     E+LR+ GIDPA  Q+  G+ LI A  +YGRR
Sbjct:  577 LSSRLMNWVWQSWNAIPSLNWGYEDWTITQFEKETGVKVPGAPNDPER-----FARRFEFLTSSAMKEKWLSWRCSKVLDLHRRIRDRIRKAKPTAKLYFTYWGGGMDYPFGSLGQTETEKLRETGIDPALYQKEPGIALIPAA-SYGRR 720          
BLAST of mRNA_P-wetherbeei_contig56564.1.1 vs. uniprot
Match: A0A0N8GEL9_9HYPH (Uncharacterized protein n=1 Tax=Prosthecomicrobium hirschii TaxID=665126 RepID=A0A0N8GEL9_9HYPH)

HSP 1 Score: 97.4 bits (241), Expect = 1.680e-20
Identity = 56/148 (37.84%), Postives = 78/148 (52.70%), Query Frame = 1
Query:    1 IALRLMPWANAALNNFVSLDWGYDDASVRQFDHDTAAHLPARLLRPIEGRDGLAAERYGWLMKNAREAWIAWRCERVAQLHGRVLDRIRRARPDLRLFASVFAW----GPQGTLEELRQAGIDPARLQRIDGLTLINAQYTYGRRDPD 432
            I LR+  WAN A NN VSLDWGYD A+VR+F  DTA   P       +  D   A R+ +L    REAW+ WRC ++  +   ++  +R ARPDL +     A      P    + LR+ G+DP  L+ + GL L+  +  YG +  D
Sbjct:  165 ITLRVSEWANPAFNNLVSLDWGYDAATVRRFLGDTAVVPPTAFDLQSDTPDAAVA-RHTFLTGVPREAWVDWRCRQLRDVLADIVATVRAARPDLVVSLHFSAMTRDRDPALDRQRLRELGLDPWLLRDLPGLELVEGRLAYGSKQLD 311          
BLAST of mRNA_P-wetherbeei_contig56564.1.1 vs. uniprot
Match: A0A7X9B0W6_9BACT (LamG domain-containing protein n=1 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7X9B0W6_9BACT)

HSP 1 Score: 93.2 bits (230), Expect = 6.620e-19
Identity = 66/185 (35.68%), Postives = 90/185 (48.65%), Query Frame = 1
Query:    1 IALRLMPWANAALNNFVSLDWGYDDASVRQFDHDTAAHLPARLLRPIEGRDGLAAERYGWLMKNAREAWIAWRCERVAQLHGRVLDRIRRARPDLRLFASVFAWGPQGTLEE------------LRQAGIDPARLQRIDGLTL----INAQYTYGRRDPDAAHNERQLRRLTD-PGPLAMLAGAP 504
            IAL L    N  L +F  L  GY+D  +  F   T   +P     P+ G+       Y WLM NARE WI WRC+ +A+ +GR+ +R+R+ARPDLRL   V   GP G +++             R  G+DP  L  I  +TL    I A+Y + R    +  N + LR     PG  + LA AP
Sbjct:  861 IALHL---TNHCLASFGELSAGYNDYVIDAFSRATGIAVPVSRQEPLRGK-----LYYEWLMANAREEWIDWRCQALAEFYGRIAERLRQARPDLRLL--VCNLGPMGEVKDEKFRDEDFARQRYRGMGLDPKYLTTIPNVTLMQTIIPAEYRWRRGHGSSDPNLQHLRNFDLLPGTYSFLATAP 1035          
BLAST of mRNA_P-wetherbeei_contig56564.1.1 vs. uniprot
Match: A0A7V3UYY2_9BACT (GHL10 domain-containing protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V3UYY2_9BACT)

HSP 1 Score: 90.5 bits (223), Expect = 5.370e-18
Identity = 51/139 (36.69%), Postives = 71/139 (51.08%), Query Frame = 1
Query:   46 FVSLDWGYDDASVRQFDHDTAAHLPARLLRPIEGRDGLA--AERYGWLMKNAREAWIAWRCERVAQLHGRVLDRIRRARPDLRLFASVF--------------AWGPQGTLEE--LRQAGIDPARLQRIDGLTLINAQY 408
            F S+  GYDD +V  F+ +T  H+PA        + G A  ++R+ WLM NARE WI WRCE++  LH  + DRIRR RPDL+L+ + +              AW P G   E   R+ G D    + + G+ L    Y
Sbjct:  549 FGSIQSGYDDFTVGLFEKETGIHVPA-------DKTGAARFSQRFRWLMANARERWIEWRCEKIRDLHKDLADRIRRRRPDLKLYLTFYHVDGHNWNPMYNLDAWRPGGRSTEQIYREGGFDMRLYRNLSGIVLRRVMY 680          
BLAST of mRNA_P-wetherbeei_contig56564.1.1 vs. uniprot
Match: A0A7X7FHR7_9BACT (LamG domain-containing protein n=1 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7X7FHR7_9BACT)

HSP 1 Score: 87.4 bits (215), Expect = 6.810e-17
Identity = 54/158 (34.18%), Postives = 77/158 (48.73%), Query Frame = 1
Query:   28 NAALNNFVSLDWGYDDASVRQFDHDTAAHLPARLLRPIEGRDGLAAERYGWLMKNAREAWIAWRCERVAQLHGRVLDRIRRARPDLRLFASVFAWGPQGTL------------EELRQAGIDPARLQRIDGLTLIN----AQYTY----GRRDPDAAH 441
            N  L +F  L  GY+D  +  F   T   +P     P+ G+       Y WLM NAR+ WI WRC+ +A+ +GR+ +R+R+ARPDLRL   +   GP G +            +  R AG+DP  L  I  +TL+     A Y +    G  DP+  H
Sbjct:  867 NHCLASFGELSAGYNDYVIDAFSRATGIAVPVSRQEPLRGK-----LYYEWLMANARQEWIDWRCQALAEFYGRIAERLRQARPDLRLV--ICNLGPMGEVKSENFRDEDFVTQRYRGAGLDPKYLTAIPNVTLVQTTIPADYRWRRGHGSTDPNLLH 1017          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56564.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0019B88BED3.530e-3746.59Uncharacterized protein n=1 Tax=Candidatus Parcuba... [more]
A0A7V3AE32_9BACT1.830e-3243.93LamGL domain-containing protein n=1 Tax=Planctomyc... [more]
A0A848AXL5_9BACT1.270e-2742.50Uncharacterized protein n=1 Tax=Victivallis vadens... [more]
UPI001AE629B82.340e-2538.46hypothetical protein n=1 Tax=Neorhizobium galegae ... [more]
A0A1G1C507_9BACT8.360e-2541.13Uncharacterized protein n=1 Tax=Lentisphaerae bact... [more]
A0A2M7A7J0_9BACT8.890e-2138.00Uncharacterized protein n=1 Tax=Armatimonadetes ba... [more]
A0A0N8GEL9_9HYPH1.680e-2037.84Uncharacterized protein n=1 Tax=Prosthecomicrobium... [more]
A0A7X9B0W6_9BACT6.620e-1935.68LamG domain-containing protein n=1 Tax=Lentisphaer... [more]
A0A7V3UYY2_9BACT5.370e-1836.69GHL10 domain-containing protein n=1 Tax=Armatimona... [more]
A0A7X7FHR7_9BACT6.810e-1734.18LamG domain-containing protein n=1 Tax=Lentisphaer... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig56564contigP-wetherbeei_contig56564:1..510 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog344747.PM8797T_29223
PFAMsGHL10
Model size510
Max annot lvl203682|Planctomycetes
Hectar predicted targeting categoryother localisation
Exons1
Evalue1e-07
EggNOG OGsCOG1649@1|root,COG1649@2|Bacteria,2IWSB@203682|Planctomycetes
DescriptionPFAM Uncharacterised BCR, COG1649
Cds size495
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186840.4083204-UTR-P-wetherbeei_contig56564:0..151683186840.4083204-UTR-P-wetherbeei_contig56564:0..15Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig56564 1..15 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186840.4196496-CDS-P-wetherbeei_contig56564:15..5101683186840.4196496-CDS-P-wetherbeei_contig56564:15..510Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig56564 16..510 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig56564.1.1prot_P-wetherbeei_contig56564.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig56564 16..510 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig56564.1.1

>prot_P-wetherbeei_contig56564.1.1 ID=prot_P-wetherbeei_contig56564.1.1|Name=mRNA_P-wetherbeei_contig56564.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=165bp
MPWANAALNNFVSLDWGYDDASVRQFDHDTAAHLPARLLRPIEGRDGLAA
ERYGWLMKNAREAWIAWRCERVAQLHGRVLDRIRRARPDLRLFASVFAWG
PQGTLEELRQAGIDPARLQRIDGLTLINAQYTYGRRDPDAAHNERQLRRL
TDPGPLAMLAGAPGQ
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mRNA from alignment at P-wetherbeei_contig56564:1..510+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig56564.1.1 ID=mRNA_P-wetherbeei_contig56564.1.1|Name=mRNA_P-wetherbeei_contig56564.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=510bp|location=Sequence derived from alignment at P-wetherbeei_contig56564:1..510+ (Phaeothamnion wetherbeei SAG_119_79)
ATCGCCCTGCGGCTGATGCCGTGGGCCAATGCGGCGCTGAACAATTTCGT TTCGCTCGACTGGGGCTATGACGACGCGAGCGTCCGACAGTTCGATCACG ACACCGCGGCGCACCTGCCGGCGCGCCTGCTGCGCCCGATCGAAGGCCGC GACGGGCTGGCAGCCGAGCGCTACGGGTGGCTGATGAAGAACGCCCGCGA AGCGTGGATCGCCTGGCGCTGCGAGCGCGTGGCACAGCTCCACGGGCGCG TGCTGGATCGTATCCGCCGTGCCCGGCCCGACCTGCGATTGTTTGCTTCG GTGTTCGCGTGGGGGCCGCAGGGCACGCTCGAGGAGCTCCGGCAGGCGGG CATCGACCCGGCGCGGCTGCAGCGCATCGACGGGCTCACGCTGATCAACG CGCAGTACACCTACGGACGGCGCGACCCCGACGCGGCGCACAACGAACGG CAGTTGCGCCGCCTCACCGATCCCGGGCCGCTGGCGATGCTGGCCGGCGC TCCCGGCCAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig56564:1..510+

>mRNA_P-wetherbeei_contig56564.1.1 ID=mRNA_P-wetherbeei_contig56564.1.1|Name=mRNA_P-wetherbeei_contig56564.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=495bp|location=Sequence derived from alignment at P-wetherbeei_contig56564:1..510+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGTGGGCCAATGCGGCGCTGAACAATTTCGTTTCGCTCGACTGGGG
CTATGACGACGCGAGCGTCCGACAGTTCGATCACGACACCGCGGCGCACC
TGCCGGCGCGCCTGCTGCGCCCGATCGAAGGCCGCGACGGGCTGGCAGCC
GAGCGCTACGGGTGGCTGATGAAGAACGCCCGCGAAGCGTGGATCGCCTG
GCGCTGCGAGCGCGTGGCACAGCTCCACGGGCGCGTGCTGGATCGTATCC
GCCGTGCCCGGCCCGACCTGCGATTGTTTGCTTCGGTGTTCGCGTGGGGG
CCGCAGGGCACGCTCGAGGAGCTCCGGCAGGCGGGCATCGACCCGGCGCG
GCTGCAGCGCATCGACGGGCTCACGCTGATCAACGCGCAGTACACCTACG
GACGGCGCGACCCCGACGCGGCGCACAACGAACGGCAGTTGCGCCGCCTC
ACCGATCCCGGGCCGCTGGCGATGCTGGCCGGCGCTCCCGGCCAG
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