mRNA_P-wetherbeei_contig56505.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig56505.1.1 vs. uniprot
Match: A0A7C4Y1Q0_9HYPH (Methylmalonyl Co-A mutase-associated GTPase MeaB n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4Y1Q0_9HYPH) HSP 1 Score: 106 bits (265), Expect = 8.540e-26 Identity = 57/96 (59.38%), Postives = 74/96 (77.08%), Query Frame = 1
Query: 1 MSDSRLPTDIPELVAGLAARDRRSIARACTLLETMKPGALDLIAALAPRLGQALVIGFTGPPGAGKSTLVNAFIRALRSRDLGVAVIAVDPSSPVT 288
M++S+ DI +L+ + R+R ++ARA TLLET++ GALDL+A + P LG+A V+GFTGPPGAGKSTLVNA+IR R VAVIAVDPSSPV+
Sbjct: 1 MTESQSRRDISQLLERVRTRERPAVARAVTLLETLQGGALDLLAMMQPYLGRAQVVGFTGPPGAGKSTLVNAYIRHARGGAKTVAVIAVDPSSPVS 96
BLAST of mRNA_P-wetherbeei_contig56505.1.1 vs. uniprot
Match: A0A2S5MZS6_HYPSQ (Methylmalonyl Co-A mutase-associated GTPase MeaB n=2 Tax=unclassified Hyphomicrobium TaxID=2619925 RepID=A0A2S5MZS6_HYPSQ) HSP 1 Score: 101 bits (251), Expect = 1.140e-23 Identity = 53/88 (60.23%), Postives = 66/88 (75.00%), Query Frame = 1
Query: 25 DIPELVAGLAARDRRSIARACTLLETMKPGALDLIAALAPRLGQALVIGFTGPPGAGKSTLVNAFIRALRSRDLGVAVIAVDPSSPVT 288
D+P +A + AR+RR++++A T LE + P A L+ AL P LG ALV GFTGPPGAGKSTLVNA IR LR+ VAVIAVDPSSP++
Sbjct: 28 DLPGFIARITARERRAVSQAVTELERLSPSAPALLQALQPHLGHALVAGFTGPPGAGKSTLVNAVIRELRAAGKTVAVIAVDPSSPIS 115
BLAST of mRNA_P-wetherbeei_contig56505.1.1 vs. uniprot
Match: A0A1M6K3U7_9ACTN (LAO/AO transport system kinase n=2 Tax=Nocardiopsis TaxID=2013 RepID=A0A1M6K3U7_9ACTN) HSP 1 Score: 97.4 bits (241), Expect = 2.440e-22 Identity = 51/88 (57.95%), Postives = 62/88 (70.45%), Query Frame = 1
Query: 25 DIPELVAGLAARDRRSIARACTLLETMKPGALDLIAALAPRLGQALVIGFTGPPGAGKSTLVNAFIRALRSRDLGVAVIAVDPSSPVT 288
D P LV L DRR++ARA TL+E P +++A LAP G+A V+GFTGPPG GKST NA +RA R+R L VAV+AVDPSSP T
Sbjct: 2 DTPRLVEKLLRGDRRALARAITLVENGSPELREIMAGLAPHTGRARVVGFTGPPGVGKSTTTNAAVRAARARGLSVAVLAVDPSSPFT 89
BLAST of mRNA_P-wetherbeei_contig56505.1.1 vs. uniprot
Match: UPI00048C0DC8 (methylmalonyl Co-A mutase-associated GTPase MeaB n=1 Tax=Nocardiopsis sp. CNT312 TaxID=1137268 RepID=UPI00048C0DC8) HSP 1 Score: 97.1 bits (240), Expect = 3.720e-22 Identity = 50/84 (59.52%), Postives = 62/84 (73.81%), Query Frame = 1
Query: 37 LVAGLAARDRRSIARACTLLETMKPGALDLIAALAPRLGQALVIGFTGPPGAGKSTLVNAFIRALRSRDLGVAVIAVDPSSPVT 288
LV G+ DRRS+ARA TL+E+ P D++A L+PR G+A V+GFTG PG GKST+ NA +RA R R L VAV+AVDPSSP T
Sbjct: 6 LVEGVLGGDRRSLARALTLVESGAPALRDIMAGLSPRTGRARVVGFTGAPGVGKSTVTNAVVRAARGRGLSVAVLAVDPSSPFT 89
BLAST of mRNA_P-wetherbeei_contig56505.1.1 vs. uniprot
Match: A0A6N6SSM9_9HYPH (Methylmalonyl Co-A mutase-associated GTPase MeaB n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6SSM9_9HYPH) HSP 1 Score: 96.7 bits (239), Expect = 5.130e-22 Identity = 50/88 (56.82%), Postives = 65/88 (73.86%), Query Frame = 1
Query: 25 DIPELVAGLAARDRRSIARACTLLETMKPGALDLIAALAPRLGQALVIGFTGPPGAGKSTLVNAFIRALRSRDLGVAVIAVDPSSPVT 288
D+ L+A + A +RR+++R T LE + PGA L+ AL P LG ALV+GFTGPPGAGKSTLVNA+ R +RS V +IAVDPSSP++
Sbjct: 14 DLAALIARVRAGERRAVSRVVTELERLSPGAPRLLEALQPYLGHALVVGFTGPPGAGKSTLVNAYTRHVRSLGQTVGIIAVDPSSPIS 101
BLAST of mRNA_P-wetherbeei_contig56505.1.1 vs. uniprot
Match: V5SFN9_9HYPH (Transporter n=2 Tax=Hyphomicrobium TaxID=81 RepID=V5SFN9_9HYPH) HSP 1 Score: 96.7 bits (239), Expect = 6.710e-22 Identity = 55/87 (63.22%), Postives = 64/87 (73.56%), Query Frame = 1
Query: 28 IPELVAGLAARDRRSIARACTLLETMKPGALDLIAALAPRLGQALVIGFTGPPGAGKSTLVNAFIRALRSRDLGVAVIAVDPSSPVT 288
IP+LVA L A +RR+IA A T LE + A L+ AL P LG ALV+GFTGPPGAGKSTLVNA I +RS+ V VIAVDPSSPV+
Sbjct: 33 IPDLVARLRAGERRAIAAAVTELEKLSTSAPPLLEALQPHLGNALVVGFTGPPGAGKSTLVNAVIAHVRSQGGTVGVIAVDPSSPVS 119
BLAST of mRNA_P-wetherbeei_contig56505.1.1 vs. uniprot
Match: UPI0015E1661E (methylmalonyl Co-A mutase-associated GTPase MeaB n=1 Tax=Sneathiella aquimaris TaxID=2599305 RepID=UPI0015E1661E) HSP 1 Score: 94.4 bits (233), Expect = 3.320e-21 Identity = 50/85 (58.82%), Postives = 63/85 (74.12%), Query Frame = 1
Query: 34 ELVAGLAARDRRSIARACTLLETMKPGALDLIAALAPRLGQALVIGFTGPPGAGKSTLVNAFIRALRSRDLGVAVIAVDPSSPVT 288
+LV GL A +R ++ARA TL+E G DL+ LAP LG ++V+GFTG PGAGKSTLV A++R LRSR V VIAVDPSSP++
Sbjct: 7 DLVIGLRAGNRAALARAITLVENNGKGTGDLLQKLAPSLGHSMVVGFTGAPGAGKSTLVGAYVRELRSRGKSVGVIAVDPSSPLS 91
BLAST of mRNA_P-wetherbeei_contig56505.1.1 vs. uniprot
Match: A0A259TZS2_9BACT (Uncharacterized protein n=1 Tax=Rubricoccus marinus TaxID=716817 RepID=A0A259TZS2_9BACT) HSP 1 Score: 93.6 bits (231), Expect = 7.450e-21 Identity = 50/91 (54.95%), Postives = 63/91 (69.23%), Query Frame = 1
Query: 16 LPTDIPELVAGLAARDRRSIARACTLLETMKPGALDLIAALAPRLGQALVIGFTGPPGAGKSTLVNAFIRALRSRDLGVAVIAVDPSSPVT 288
+P +L +G+ +R RR+IARA T +E PGA DL+ AL P G+A IG TGPPGAGKSTL + + ALR+R VAV+AVDPSSP T
Sbjct: 1 MPDSALDLASGVRSRQRRTIARALTAVENALPGAADLVDALYPDTGRAWRIGITGPPGAGKSTLTDRLVSALRARGQTVAVVAVDPSSPFT 91
BLAST of mRNA_P-wetherbeei_contig56505.1.1 vs. uniprot
Match: A0A0D6JHQ1_9HYPH (Putative enzyme n=2 Tax=Filomicrobium TaxID=119044 RepID=A0A0D6JHQ1_9HYPH) HSP 1 Score: 93.6 bits (231), Expect = 8.160e-21 Identity = 53/87 (60.92%), Postives = 64/87 (73.56%), Query Frame = 1
Query: 28 IPELVAGLAARDRRSIARACTLLETMKPGALDLIAALAPRLGQALVIGFTGPPGAGKSTLVNAFIRALRSRDLGVAVIAVDPSSPVT 288
I + VA L A +RR+IA A T LE + A L+ AL P LG+ALVIG TGPPGAGKSTLVNA IR R+++L V VIAVDPSSP++
Sbjct: 21 ISDQVARLLAGERRAIASAVTELERLSTSAPALLRALQPHLGRALVIGLTGPPGAGKSTLVNALIRHARTQNLRVGVIAVDPSSPIS 107
BLAST of mRNA_P-wetherbeei_contig56505.1.1 vs. uniprot
Match: UPI0003774C10 (methylmalonyl Co-A mutase-associated GTPase MeaB n=1 Tax=Hyphomicrobium zavarzinii TaxID=48292 RepID=UPI0003774C10) HSP 1 Score: 92.8 bits (229), Expect = 1.570e-20 Identity = 53/87 (60.92%), Postives = 63/87 (72.41%), Query Frame = 1
Query: 28 IPELVAGLAARDRRSIARACTLLETMKPGALDLIAALAPRLGQALVIGFTGPPGAGKSTLVNAFIRALRSRDLGVAVIAVDPSSPVT 288
IP+LV L A +RR+IA A T LE + A L+ AL P LG+ALV+GFTGPPGAGKSTLVNA I +RS V VIAVDPSSP++
Sbjct: 21 IPDLVQRLRAGERRAIAAAVTELEKLSASAPPLLEALQPYLGKALVVGFTGPPGAGKSTLVNAVIAHVRSLGGTVGVIAVDPSSPIS 107 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56505.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig56505.1.1 >prot_P-wetherbeei_contig56505.1.1 ID=prot_P-wetherbeei_contig56505.1.1|Name=mRNA_P-wetherbeei_contig56505.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=96bp MSDSRLPTDIPELVAGLAARDRRSIARACTLLETMKPGALDLIAALAPRLback to top mRNA from alignment at P-wetherbeei_contig56505:203..490+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig56505.1.1 ID=mRNA_P-wetherbeei_contig56505.1.1|Name=mRNA_P-wetherbeei_contig56505.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=288bp|location=Sequence derived from alignment at P-wetherbeei_contig56505:203..490+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig56505:203..490+ >mRNA_P-wetherbeei_contig56505.1.1 ID=mRNA_P-wetherbeei_contig56505.1.1|Name=mRNA_P-wetherbeei_contig56505.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=288bp|location=Sequence derived from alignment at P-wetherbeei_contig56505:203..490+ (Phaeothamnion wetherbeei SAG_119_79)back to top |