mRNA_P-wetherbeei_contig56494.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig56494.1.1
Unique NamemRNA_P-wetherbeei_contig56494.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig56494.1.1 vs. uniprot
Match: UPI00198E4104 (Uncharacterized protein n=1 Tax=Prolixibacteraceae bacterium TaxID=2053594 RepID=UPI00198E4104)

HSP 1 Score: 331 bits (848), Expect = 7.700e-113
Identity = 153/172 (88.95%), Postives = 162/172 (94.19%), Query Frame = 1
Query:    1 VKRVLDAIGGPEKVGLLLTGHSHWDHSFDTATWSRLTGAPIIGSQTTCFEVMAENIPAERCRPVYGLEKIELAEGVTMRVVRWNHSGDPAKNWEQHDPVELDDIPRQDPATGGLKAGVAEDFPNGGGNRGFLFTVDGRRGRYSWFYQNSASAVDLHLPIVIKGVDYGAPIDN 516
            V RVLDAIGG +K+ LLLTGHSHWDHSFDTATWSRLTGAPIIGSQTTCFEVMAEN+PAERC PVYGLEKI +AEGVTMRVVRWNHSGDPAKNWEQHDPVEL+DIPRQDPATGGL+AGV EDFPNGGGNRGFLFTVD  +GRYSWFYQNSAS VDLH+PIVIKGVDYGAP +N
Sbjct:   83 VTRVLDAIGGADKIKLLLTGHSHWDHSFDTATWSRLTGAPIIGSQTTCFEVMAENLPAERCTPVYGLEKITIAEGVTMRVVRWNHSGDPAKNWEQHDPVELEDIPRQDPATGGLRAGVTEDFPNGGGNRGFLFTVDAPQGRYSWFYQNSASPVDLHVPIVIKGVDYGAPTEN 254          
BLAST of mRNA_P-wetherbeei_contig56494.1.1 vs. uniprot
Match: UPI0019AC7941 (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=UPI0019AC7941)

HSP 1 Score: 320 bits (821), Expect = 1.640e-108
Identity = 148/172 (86.05%), Postives = 157/172 (91.28%), Query Frame = 1
Query:    1 VKRVLDAIGGPEKVGLLLTGHSHWDHSFDTATWSRLTGAPIIGSQTTCFEVMAENIPAERCRPVYGLEKIELAEGVTMRVVRWNHSGDPAKNWEQHDPVELDDIPRQDPATGGLKAGVAEDFPNGGGNRGFLFTVDGRRGRYSWFYQNSASAVDLHLPIVIKGVDYGAPIDN 516
            V RVLDAIGGP +V LLLTGHSHWDHSFDTATWS+LT AP+IGS TTCFE MAEN+P  RCRPVYG EK+ELAEGV M VVRWNHSGDPAKNWEQHDPVELD IPR DPATGGL+AGVAEDFPNGGGNRGFLFTVDG +GRYSWFYQNSASAVDLH+PIVI GVDYGAPI+N
Sbjct:   18 VARVLDAIGGPAEVNLLLTGHSHWDHSFDTATWSKLTDAPVIGSMTTCFEAMAENLPENRCRPVYGKEKLELAEGVAMYVVRWNHSGDPAKNWEQHDPVELDAIPRPDPATGGLRAGVAEDFPNGGGNRGFLFTVDGPKGRYSWFYQNSASAVDLHVPIVIDGVDYGAPIEN 189          
BLAST of mRNA_P-wetherbeei_contig56494.1.1 vs. uniprot
Match: A0A843SQS4_9BACT (Uncharacterized protein n=1 Tax=Luteitalea sp. TaxID=2004800 RepID=A0A843SQS4_9BACT)

HSP 1 Score: 281 bits (719), Expect = 3.970e-92
Identity = 132/172 (76.74%), Postives = 148/172 (86.05%), Query Frame = 1
Query:    1 VKRVLDAIGGPEKVGLLLTGHSHWDHSFDTATWSRLTGAPIIGSQTTCFEVMAENIPAERCRPVYGLEKIELAEGVTMRVVRWNHSGDPAKNWEQHDPVELDDIPRQDPATGGLKAGVAEDFPNGGGNRGFLFTVDGRRGRYSWFYQNSASAVDLHLPIVIKGVDYGAPIDN 516
            V+RVL A+GGP  V LLLTGHSH+DHSFDTATWS+LTGA I+GS+TTCF+ MAE++PA+RC  VYG EKI LAEGVTMRVVRWNHSGDPA N EQH+PVELD  PR DP TGGL+AGVAEDFPNGGG R FLF VDG  GR+SWFYQNSAS VDLH+PIV+ G DYGAPI+N
Sbjct:   83 VRRVLAALGGPSSVNLLLTGHSHFDHSFDTATWSQLTGARIVGSKTTCFQAMAESLPADRCTAVYGGEKISLAEGVTMRVVRWNHSGDPATNPEQHNPVELDAAPRLDPQTGGLRAGVAEDFPNGGGARAFLFVVDGPDGRFSWFYQNSASPVDLHVPIVVGGTDYGAPIEN 254          
BLAST of mRNA_P-wetherbeei_contig56494.1.1 vs. uniprot
Match: A0A432HUH8_9BACT (Uncharacterized protein n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A432HUH8_9BACT)

HSP 1 Score: 272 bits (696), Expect = 9.450e-89
Identity = 129/172 (75.00%), Postives = 147/172 (85.47%), Query Frame = 1
Query:    1 VKRVLDAIGGPEKVGLLLTGHSHWDHSFDTATWSRLTGAPIIGSQTTCFEVMAENIPAERCRPVYGLEKIELAEGVTMRVVRWNHSGDPAKNWEQHDPVELDDIPRQDPATGGLKAGVAEDFPNGGGNRGFLFTVDGRRGRYSWFYQNSASAVDLHLPIVIKGVDYGAPIDN 516
            V+RVL A+GGP +V LLLTGHSHWDHSFDTATWS LT APIIGS+TTCF+ MAENIPAERC  V G E++ +AEGVTM VVRWNHSGDP +N EQH+ VELD +P +DP TGGL+AGVAEDFPNGGG+RGFLF VDG  G +SWF Q+SASAVDL +PIV+ GVDYGAPIDN
Sbjct:   83 VRRVLSALGGPPRVNLLLTGHSHWDHSFDTATWSTLTDAPIIGSRTTCFQAMAENIPAERCTVVDGREQMIVAEGVTMFVVRWNHSGDPDRNPEQHNAVELDAVPARDPVTGGLRAGVAEDFPNGGGSRGFLFRVDGPDGPFSWFQQSSASAVDLAVPIVVDGVDYGAPIDN 254          
BLAST of mRNA_P-wetherbeei_contig56494.1.1 vs. uniprot
Match: A0A2E8E587_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2E8E587_9BACT)

HSP 1 Score: 265 bits (676), Expect = 1.170e-85
Identity = 122/172 (70.93%), Postives = 143/172 (83.14%), Query Frame = 1
Query:    1 VKRVLDAIGGPEKVGLLLTGHSHWDHSFDTATWSRLTGAPIIGSQTTCFEVMAENIPAERCRPVYGLEKIELAEGVTMRVVRWNHSGDPAKNWEQHDPVELDDIPRQDPATGGLKAGVAEDFPNGGGNRGFLFTVDGRRGRYSWFYQNSASAVDLHLPIVIKGVDYGAPIDN 516
            V+RVL AIGGP  V LLLTGHSHWDHSFDTATW+ LTGAPI+GS+T+CF+VMAE +PAE C  V G E++ +A+ V M VVRWNHSGDP +N EQH+PVELD +P  DP TGGL+AGVAEDFPNGGG RGFLF  +G  GR+SWF Q+SASAVDL +PIV+ GVD+GAPIDN
Sbjct:   83 VRRVLSAIGGPPSVNLLLTGHSHWDHSFDTATWASLTGAPIVGSRTSCFQVMAETVPAEECTVVEGGERMTVADDVIMHVVRWNHSGDPDRNPEQHNPVELDAVPEPDPETGGLRAGVAEDFPNGGGTRGFLFVANGPDGRFSWFQQSSASAVDLDVPIVVDGVDHGAPIDN 254          
BLAST of mRNA_P-wetherbeei_contig56494.1.1 vs. uniprot
Match: A0A2E4FQZ8_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2E4FQZ8_9BACT)

HSP 1 Score: 256 bits (654), Expect = 2.430e-82
Identity = 122/172 (70.93%), Postives = 141/172 (81.98%), Query Frame = 1
Query:    1 VKRVLDAIGGPEKVGLLLTGHSHWDHSFDTATWSRLTGAPIIGSQTTCFEVMAENIPAERCRPVYGLEKIELAEGVTMRVVRWNHSGDPAKNWEQHDPVELDDIPRQDPATGGLKAGVAEDFPNGGGNRGFLFTVDGRRGRYSWFYQNSASAVDLHLPIVIKGVDYGAPIDN 516
            V  VL A+GGP +V LLLTGHSHWDHSFDTATWS LT APIIGS+TTCF+  AE+IPA+RC  V G E I L+ GVTM VVRWNHSGDP +N EQH+PVELD +P  D A+GGL+ GVAEDFPNGGG+RGFLF V+G  G +SWF Q+SASAVDL +PIV+ GVD+GAPIDN
Sbjct:   83 VXDVLVALGGPPRVTLLLTGHSHWDHSFDTATWSGLTQAPIIGSRTTCFQAQAEDIPADRCTVVEGTEAIALSPGVTMYVVRWNHSGDPDRNPEQHNPVELDGVPTLDAASGGLRPGVAEDFPNGGGSRGFLFVVEGPGGSFSWFQQSSASAVDLDMPIVVDGVDHGAPIDN 254          
BLAST of mRNA_P-wetherbeei_contig56494.1.1 vs. uniprot
Match: A0A381SN29_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381SN29_9ZZZZ)

HSP 1 Score: 251 bits (642), Expect = 8.510e-82
Identity = 122/173 (70.52%), Postives = 137/173 (79.19%), Query Frame = 1
Query:    1 VKRVLDAIGGPEKVGLLLTGHSHWDHSFDTATWSRLTGAPIIGSQTTCFEVMAENIPAERCRPVYGLEKIELAEGVTMRVVRWNHSGDPAKNWEQHDPVELDDIPRQDPATGGLKAGVAEDFPNGGGNRGFLFTVDGRRGR-YSWFYQNSASAVDLHLPIVIKGVDYGAPIDN 516
            V+RV DAIGGP +V LLLTGHSHWDHSFDTATW+ LTGAP+IGS+TTC +V +E IPA+RC  V G E I L   VTM VVRWNHSGDP +N EQH+ VELD +P  DPATGGL+ GVAEDFPNGGG RGFLF VD   G  YSWF Q+SASAVDL +PIV+  VDYGAP DN
Sbjct:   83 VRRVHDAIGGPPRVTLLLTGHSHWDHSFDTATWAALTGAPVIGSRTTCLQVQSEGIPADRCTIVDGTEVISLTPDVTMYVVRWNHSGDPDRNPEQHNAVELDAVPVPDPATGGLRVGVAEDFPNGGGTRGFLFVVDDASGSSYSWFQQSSASAVDLDVPIVVDDVDYGAPTDN 255          
BLAST of mRNA_P-wetherbeei_contig56494.1.1 vs. uniprot
Match: A0A3D4FSV7_9BACT (Uncharacterized protein n=3 Tax=root TaxID=1 RepID=A0A3D4FSV7_9BACT)

HSP 1 Score: 254 bits (649), Expect = 1.380e-81
Identity = 123/173 (71.10%), Postives = 138/173 (79.77%), Query Frame = 1
Query:    1 VKRVLDAIGGPEKVGLLLTGHSHWDHSFDTATWSRLTGAPIIGSQTTCFEVMAENIPAERCRPVYGLEKIELAEGVTMRVVRWNHSGDPAKNWEQHDPVELDDIPRQDPATGGLKAGVAEDFPNGGGNRGFLFTVDGRRGR-YSWFYQNSASAVDLHLPIVIKGVDYGAPIDN 516
            V+RVLDAIGGP +V LLLTGHSHWDHSFDTATW+ LTGAP+IGS+TTC +V +E IPA+RC  V G E I L   VTM VVRWNHSGDP +N EQH+ VELD +P  DPATGGL+ GVAEDFPNGGG RGFLF VD   G  YSWF Q+SASAVDL +PIV+  VDYGAP DN
Sbjct:   83 VRRVLDAIGGPPRVTLLLTGHSHWDHSFDTATWAALTGAPVIGSRTTCLQVQSEGIPADRCTIVDGTEVISLTPDVTMYVVRWNHSGDPDRNPEQHNAVELDAVPVPDPATGGLRVGVAEDFPNGGGTRGFLFVVDDASGSSYSWFQQSSASAVDLDVPIVVDDVDYGAPTDN 255          
BLAST of mRNA_P-wetherbeei_contig56494.1.1 vs. uniprot
Match: A0A7Z9T7G7_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7Z9T7G7_9BACT)

HSP 1 Score: 248 bits (633), Expect = 3.850e-79
Identity = 114/172 (66.28%), Postives = 139/172 (80.81%), Query Frame = 1
Query:    1 VKRVLDAIGGPEKVGLLLTGHSHWDHSFDTATWSRLTGAPIIGSQTTCFEVMAENIPAERCRPVYGLEKIELAEGVTMRVVRWNHSGDPAKNWEQHDPVELDDIPRQDPATGGLKAGVAEDFPNGGGNRGFLFTVDGRRGRYSWFYQNSASAVDLHLPIVIKGVDYGAPIDN 516
            V+RVL+A+GG   V  LLTGHSHWDHSFD  TWS+LTGAPIIGSQTTC++VMAE +   +C+   G E+I + + + + VVRWNHSGDP+ N EQH+ VEL+ +P  D ATGGL+AGVAE+FPNGGG+RGFLF VD   GR+SWF Q+SASAVDLH+PIV+ GVDYGAPIDN
Sbjct:   83 VRRVLNALGGSNHVTRLLTGHSHWDHSFDIGTWSKLTGAPIIGSQTTCYQVMAEGVSPAQCQVAVGKEQIAITQDINLFVVRWNHSGDPSLNPEQHNAVELNAVPEIDRATGGLRAGVAENFPNGGGSRGFLFVVDSPEGRFSWFQQSSASAVDLHVPIVVNGVDYGAPIDN 254          
BLAST of mRNA_P-wetherbeei_contig56494.1.1 vs. uniprot
Match: A0A7X3TZT4_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7X3TZT4_9BACT)

HSP 1 Score: 237 bits (605), Expect = 4.090e-75
Identity = 111/172 (64.53%), Postives = 133/172 (77.33%), Query Frame = 1
Query:    1 VKRVLDAIGGPEKVGLLLTGHSHWDHSFDTATWSRLTGAPIIGSQTTCFEVMAENIPAERCRPVYGLEKIELAEGVTMRVVRWNHSGDPAKNWEQHDPVELDDIPRQDPATGGLKAGVAEDFPNGGGNRGFLFTVDGRRGRYSWFYQNSASAVDLHLPIVIKGVDYGAPIDN 516
            V RVL A+GG  ++ LLLTGHSH+DHSFD ATWSRLTGAPI GS+TTC++ +A N+P +RC PV G E+I++   V M VVRWNHSGD     EQ + VEL   P  DP TGGL+AGVAEDFPNGGG+RG+LF VDG  G +SWFYQN+ASAVDLHLP V+  +DYG P+DN
Sbjct:   66 VARVLAALGGATRINLLLTGHSHFDHSFDIATWSRLTGAPIYGSRTTCYQAIAGNVPEDRCTPVLGGERIQVVPNVAMFVVRWNHSGDTGPKPEQPNAVELAAGPVPDPETGGLRAGVAEDFPNGGGSRGYLFRVDGPEGTFSWFYQNTASAVDLHLPEVVDDIDYGVPLDN 237          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56494.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00198E41047.700e-11388.95Uncharacterized protein n=1 Tax=Prolixibacteraceae... [more]
UPI0019AC79411.640e-10886.05Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
A0A843SQS4_9BACT3.970e-9276.74Uncharacterized protein n=1 Tax=Luteitalea sp. Tax... [more]
A0A432HUH8_9BACT9.450e-8975.00Uncharacterized protein n=1 Tax=Candidatus Marinim... [more]
A0A2E8E587_9BACT1.170e-8570.93Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
A0A2E4FQZ8_9BACT2.430e-8270.93Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
A0A381SN29_9ZZZZ8.510e-8270.52Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A0A3D4FSV7_9BACT1.380e-8171.10Uncharacterized protein n=3 Tax=root TaxID=1 RepID... [more]
A0A7Z9T7G7_9BACT3.850e-7966.28Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
A0A7X3TZT4_9BACT4.090e-7564.53Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig56494contigP-wetherbeei_contig56494:2..517 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog330084.JNYZ01000008_gene6625
PFAMsLactamase_B_2,Lactamase_B_3
Model size516
Max annot lvl2|Bacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.31e-42
EggNOG OGsCOG2220@1|root,COG2220@2|Bacteria
DescriptionN-acetylphosphatidylethanolamine-hydrolysing phospholipas activity
Cds size516
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186839.6453016-CDS-P-wetherbeei_contig56494:1..5171683186839.6453016-CDS-P-wetherbeei_contig56494:1..517Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig56494 2..517 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig56494.1.1prot_P-wetherbeei_contig56494.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig56494 2..517 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig56494.1.1

>prot_P-wetherbeei_contig56494.1.1 ID=prot_P-wetherbeei_contig56494.1.1|Name=mRNA_P-wetherbeei_contig56494.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=172bp
VKRVLDAIGGPEKVGLLLTGHSHWDHSFDTATWSRLTGAPIIGSQTTCFE
VMAENIPAERCRPVYGLEKIELAEGVTMRVVRWNHSGDPAKNWEQHDPVE
LDDIPRQDPATGGLKAGVAEDFPNGGGNRGFLFTVDGRRGRYSWFYQNSA
SAVDLHLPIVIKGVDYGAPIDN
back to top

mRNA from alignment at P-wetherbeei_contig56494:2..517+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig56494.1.1 ID=mRNA_P-wetherbeei_contig56494.1.1|Name=mRNA_P-wetherbeei_contig56494.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=516bp|location=Sequence derived from alignment at P-wetherbeei_contig56494:2..517+ (Phaeothamnion wetherbeei SAG_119_79)
GTCAAGCGCGTCCTCGACGCCATCGGCGGACCGGAAAAGGTCGGCCTGCT GCTGACCGGCCACAGCCACTGGGATCATTCCTTCGATACCGCAACCTGGT CCCGGTTGACCGGCGCGCCGATCATCGGCTCGCAGACGACGTGTTTCGAA GTCATGGCGGAAAACATTCCTGCTGAGCGCTGCCGGCCGGTCTACGGCCT GGAAAAAATCGAGCTTGCCGAGGGCGTGACGATGCGTGTGGTGCGCTGGA ACCACAGCGGCGATCCGGCAAAAAACTGGGAGCAGCATGACCCGGTCGAA CTCGATGACATTCCGCGCCAGGATCCGGCGACCGGCGGCCTTAAGGCCGG GGTGGCCGAGGATTTTCCGAACGGCGGCGGCAATCGCGGCTTCCTGTTTA CCGTTGACGGGCGGCGAGGGCGCTACAGCTGGTTCTACCAGAACTCGGCC AGCGCAGTGGACTTGCACCTGCCGATCGTGATCAAAGGCGTGGACTACGG CGCGCCCATCGACAAT
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig56494:2..517+

>mRNA_P-wetherbeei_contig56494.1.1 ID=mRNA_P-wetherbeei_contig56494.1.1|Name=mRNA_P-wetherbeei_contig56494.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=516bp|location=Sequence derived from alignment at P-wetherbeei_contig56494:2..517+ (Phaeothamnion wetherbeei SAG_119_79)
GTCAAGCGCGTCCTCGACGCCATCGGCGGACCGGAAAAGGTCGGCCTGCT
GCTGACCGGCCACAGCCACTGGGATCATTCCTTCGATACCGCAACCTGGT
CCCGGTTGACCGGCGCGCCGATCATCGGCTCGCAGACGACGTGTTTCGAA
GTCATGGCGGAAAACATTCCTGCTGAGCGCTGCCGGCCGGTCTACGGCCT
GGAAAAAATCGAGCTTGCCGAGGGCGTGACGATGCGTGTGGTGCGCTGGA
ACCACAGCGGCGATCCGGCAAAAAACTGGGAGCAGCATGACCCGGTCGAA
CTCGATGACATTCCGCGCCAGGATCCGGCGACCGGCGGCCTTAAGGCCGG
GGTGGCCGAGGATTTTCCGAACGGCGGCGGCAATCGCGGCTTCCTGTTTA
CCGTTGACGGGCGGCGAGGGCGCTACAGCTGGTTCTACCAGAACTCGGCC
AGCGCAGTGGACTTGCACCTGCCGATCGTGATCAAAGGCGTGGACTACGG
CGCGCCCATCGACAAT
back to top