mRNA_P-wetherbeei_contig5648.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5648.1.1 vs. uniprot
Match: A0A836C9E8_9STRA (TPT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9E8_9STRA) HSP 1 Score: 119 bits (297), Expect = 8.870e-31 Identity = 52/70 (74.29%), Postives = 62/70 (88.57%), Query Frame = 1
Query: 1 CVVGTGISYAGWWCRAQVSATTFTLVGVVNKLLTVLLNVLVWNKHASGPGIACLLVCLVGGGIYKQSPMR 210
CVVGT ISY GWWCR +VSATTFTLVGV+NK+LTVLLNV++W+KHAS G+A LL+CL GG +YKQ+PMR
Sbjct: 228 CVVGTAISYCGWWCRGRVSATTFTLVGVINKVLTVLLNVVIWDKHASPVGLAFLLLCLGGGALYKQAPMR 297
BLAST of mRNA_P-wetherbeei_contig5648.1.1 vs. uniprot
Match: A0A7S4JQE4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JQE4_9STRA) HSP 1 Score: 114 bits (286), Expect = 2.340e-30 Identity = 46/70 (65.71%), Postives = 60/70 (85.71%), Query Frame = 1
Query: 1 CVVGTGISYAGWWCRAQVSATTFTLVGVVNKLLTVLLNVLVWNKHASGPGIACLLVCLVGGGIYKQSPMR 210
C++GTGI Y+GWWCR +VSAT++TL+GV+NK LTVL+N LVW++HA GIACL +CLVGG Y+Q+PMR
Sbjct: 95 CIIGTGIGYSGWWCRGKVSATSYTLIGVMNKFLTVLMNCLVWDQHAVPAGIACLFLCLVGGSFYRQAPMR 164
BLAST of mRNA_P-wetherbeei_contig5648.1.1 vs. uniprot
Match: A0A7S1VPT6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VPT6_9STRA) HSP 1 Score: 112 bits (280), Expect = 5.340e-30 Identity = 45/70 (64.29%), Postives = 60/70 (85.71%), Query Frame = 1
Query: 1 CVVGTGISYAGWWCRAQVSATTFTLVGVVNKLLTVLLNVLVWNKHASGPGIACLLVCLVGGGIYKQSPMR 210
C VGTGI Y+GWWCR+ VSAT+FTL+GV+NK LT+L+N L+W++HA+ GIA L +CLVGG +Y+Q+PMR
Sbjct: 43 CAVGTGIGYSGWWCRSMVSATSFTLIGVMNKCLTILVNCLIWDQHANAKGIASLFLCLVGGSLYRQAPMR 112
BLAST of mRNA_P-wetherbeei_contig5648.1.1 vs. uniprot
Match: A0A7S4JQF2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JQF2_9STRA) HSP 1 Score: 114 bits (286), Expect = 4.590e-29 Identity = 46/70 (65.71%), Postives = 60/70 (85.71%), Query Frame = 1
Query: 1 CVVGTGISYAGWWCRAQVSATTFTLVGVVNKLLTVLLNVLVWNKHASGPGIACLLVCLVGGGIYKQSPMR 210
C++GTGI Y+GWWCR +VSAT++TL+GV+NK LTVL+N LVW++HA GIACL +CLVGG Y+Q+PMR
Sbjct: 241 CIIGTGIGYSGWWCRGKVSATSYTLIGVMNKFLTVLMNCLVWDQHAVPAGIACLFLCLVGGSFYRQAPMR 310
BLAST of mRNA_P-wetherbeei_contig5648.1.1 vs. uniprot
Match: K0T1E8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T1E8_THAOC) HSP 1 Score: 115 bits (287), Expect = 1.110e-28 Identity = 47/70 (67.14%), Postives = 62/70 (88.57%), Query Frame = 1
Query: 1 CVVGTGISYAGWWCRAQVSATTFTLVGVVNKLLTVLLNVLVWNKHASGPGIACLLVCLVGGGIYKQSPMR 210
C VGTGI Y+GWWCR++VSA +FTL+GV+NK LTVL+N+L+W++HAS G+A LL+CLVGG +YKQ+PMR
Sbjct: 362 CAVGTGIGYSGWWCRSKVSAASFTLIGVINKCLTVLVNLLIWDQHASPEGVASLLLCLVGGAMYKQAPMR 431
BLAST of mRNA_P-wetherbeei_contig5648.1.1 vs. uniprot
Match: A0A6U2XZG4_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A6U2XZG4_9STRA) HSP 1 Score: 109 bits (272), Expect = 3.540e-28 Identity = 46/70 (65.71%), Postives = 58/70 (82.86%), Query Frame = 1
Query: 1 CVVGTGISYAGWWCRAQVSATTFTLVGVVNKLLTVLLNVLVWNKHASGPGIACLLVCLVGGGIYKQSPMR 210
CV GTGI Y+ WWCR VSAT+FTL+GV+NK LT+LLN+LVW++HA GIA L +CLVGG +Y+Q+PMR
Sbjct: 85 CVAGTGIGYSSWWCRGMVSATSFTLIGVMNKCLTILLNILVWDQHAPPLGIASLFLCLVGGMLYRQAPMR 154
BLAST of mRNA_P-wetherbeei_contig5648.1.1 vs. uniprot
Match: B7FYC0_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FYC0_PHATC) HSP 1 Score: 111 bits (278), Expect = 6.280e-28 Identity = 46/70 (65.71%), Postives = 57/70 (81.43%), Query Frame = 1
Query: 1 CVVGTGISYAGWWCRAQVSATTFTLVGVVNKLLTVLLNVLVWNKHASGPGIACLLVCLVGGGIYKQSPMR 210
C GTGI YAGWWCR VSAT+FTL+GV+NK LT+LLNV++W++HA GI L +CLVGG IY+QSP+R
Sbjct: 235 CAAGTGIGYAGWWCRGNVSATSFTLIGVINKCLTILLNVMIWDQHAPPKGILSLALCLVGGSIYRQSPLR 304
BLAST of mRNA_P-wetherbeei_contig5648.1.1 vs. uniprot
Match: A0A1E7FQU1_9STRA (EamA domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FQU1_9STRA) HSP 1 Score: 110 bits (274), Expect = 2.560e-27 Identity = 47/69 (68.12%), Postives = 57/69 (82.61%), Query Frame = 1
Query: 4 VVGTGISYAGWWCRAQVSATTFTLVGVVNKLLTVLLNVLVWNKHASGPGIACLLVCLVGGGIYKQSPMR 210
VVGTGI Y+GWWCR VSAT+FTL+GV+NK LTVLLN L+W++HA GI CL +C+ GG IYKQ+PMR
Sbjct: 239 VVGTGIGYSGWWCRGVVSATSFTLIGVMNKCLTVLLNTLIWDQHAKPGGIFCLFLCIAGGMIYKQAPMR 307
BLAST of mRNA_P-wetherbeei_contig5648.1.1 vs. uniprot
Match: A0A7S2W242_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W242_9STRA) HSP 1 Score: 103 bits (256), Expect = 3.670e-27 Identity = 42/68 (61.76%), Postives = 56/68 (82.35%), Query Frame = 1
Query: 7 VGTGISYAGWWCRAQVSATTFTLVGVVNKLLTVLLNVLVWNKHASGPGIACLLVCLVGGGIYKQSPMR 210
+GTGI Y WWCR +VSAT+FTL+GV+NK LTVL+N L+W+ HAS GIA L++C++GG Y+Q+PMR
Sbjct: 1 IGTGIGYTSWWCRDKVSATSFTLIGVMNKCLTVLVNCLIWDNHASKAGIASLVLCIIGGTFYQQAPMR 68
BLAST of mRNA_P-wetherbeei_contig5648.1.1 vs. uniprot
Match: B8BY33_THAPS (TPT domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BY33_THAPS) HSP 1 Score: 107 bits (267), Expect = 2.320e-26 Identity = 43/70 (61.43%), Postives = 60/70 (85.71%), Query Frame = 1
Query: 1 CVVGTGISYAGWWCRAQVSATTFTLVGVVNKLLTVLLNVLVWNKHASGPGIACLLVCLVGGGIYKQSPMR 210
C+VGTGI Y+GWWCR++VSA ++TL+GV+NK LTVL+N+++W++HA+ GIA L +CLVGG Y Q+PMR
Sbjct: 243 CIVGTGIGYSGWWCRSKVSAASYTLIGVLNKCLTVLVNLMIWDQHAAVEGIASLSLCLVGGAFYAQAPMR 312 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5648.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5648.1.1 >prot_P-wetherbeei_contig5648.1.1 ID=prot_P-wetherbeei_contig5648.1.1|Name=mRNA_P-wetherbeei_contig5648.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=70bp CVVGTGISYAGWWCRAQVSATTFTLVGVVNKLLTVLLNVLVWNKHASGPGback to top mRNA from alignment at P-wetherbeei_contig5648:3..532+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5648.1.1 ID=mRNA_P-wetherbeei_contig5648.1.1|Name=mRNA_P-wetherbeei_contig5648.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=530bp|location=Sequence derived from alignment at P-wetherbeei_contig5648:3..532+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5648:3..532+ >mRNA_P-wetherbeei_contig5648.1.1 ID=mRNA_P-wetherbeei_contig5648.1.1|Name=mRNA_P-wetherbeei_contig5648.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=210bp|location=Sequence derived from alignment at P-wetherbeei_contig5648:3..532+ (Phaeothamnion wetherbeei SAG_119_79)back to top |