mRNA_P-wetherbeei_contig5646.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5646.6.1
Unique NamemRNA_P-wetherbeei_contig5646.6.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5646.6.1 vs. uniprot
Match: D8LHG8_ECTSI (BEACH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHG8_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 4.670e-21
Identity = 71/169 (42.01%), Postives = 89/169 (52.66%), Query Frame = 1
Query:    1 DLLFRFVAFSLLRAVEFLHGRCLTLAASDRSSASAGLLSPRRLTMTAQLWLQVPP--PXXXXXXXXXXXXXLPSLRPPL-------GEDAPLTVRWSNGWISNFEYLMALNRAAGRGAADGGLHPVLPWVSDLT-----------------VEQGGWRDLAQTKYRLKK 429
            DL+ RFV + LLRAV+FLH + +T+          G LS   + +T  LW+Q+ P  P      XXXXXXX    R P        G+D PLT RW  G +SN EYL+A+N AAGR   D   HP++PWV DL                   E  GWRDL +TK+RLKK
Sbjct:  253 DLVVRFVFYQLLRAVDFLHSKGITV----------GNLSSGSILLTENLWVQITPSIPLLLGRQXXXXXXXXALSRQPQASPRRSPGDDLPLTYRWVKGMVSNLEYLLAVNAAAGRMVGDRSCHPIVPWVCDLLHRVTEEXXXXXXXXXXXXEGTGWRDLTKTKFRLKK 411          
BLAST of mRNA_P-wetherbeei_contig5646.6.1 vs. uniprot
Match: A0A7S3K380_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K380_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.010e-19
Identity = 41/65 (63.08%), Postives = 51/65 (78.46%), Query Frame = 1
Query:  235 EDAPLTVRWSNGWISNFEYLMALNRAAGRGAADGGLHPVLPWVSDLTVEQGGWRDLAQTKYRLKK 429
            +D PLT RW  G +SNFEYLMALN AAGRG+  G  H +LPWV+D T++ GGWRDL++TK+RL K
Sbjct:  167 QDVPLTTRWLEGRLSNFEYLMALNEAAGRGSILGEDHAILPWVTDFTIKDGGWRDLSKTKFRLTK 231          
BLAST of mRNA_P-wetherbeei_contig5646.6.1 vs. uniprot
Match: W2KUT5_PHYPR (BEACH domain-containing protein n=19 Tax=Phytophthora TaxID=4783 RepID=W2KUT5_PHYPR)

HSP 1 Score: 89.4 bits (220), Expect = 7.790e-18
Identity = 63/147 (42.86%), Postives = 74/147 (50.34%), Query Frame = 1
Query:    1 DLLFRFVAFSLLRAVEFLHGRCLTLAASDRSSASAGLLSPRRLTMTAQLWLQVPPPXXXXXXXXXXXXXLPSLRPPLGEDA----PLTVRWSNGWISNFEYLMALNRAAGRGAADGGLHPVLPWVSDLTVEQGGWRDLAQTKYRLKK 429
            DL  R V F L R +EFLH         +R  A  G  SPR L +T  LWL +                 PS   P   +      +T RW  G ISNFEYLM LN AAGR   DG  HP LPWV+D T   GGWRDL+++K+RL K
Sbjct:  226 DLKKRLVLFQLCRVLEFLH---------ERGLACDGF-SPRDLYLTDTLWLHLAA-LPRVLDACSYASAEPSRSIPRDVECFSSRSITERWCTGDISNFEYLMVLNTAAGRRMEDGVFHPFLPWVTDFT---GGWRDLSKSKFRLNK 358          
BLAST of mRNA_P-wetherbeei_contig5646.6.1 vs. uniprot
Match: A0A196SKP9_BLAHN (Serine/threonine kinase n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SKP9_BLAHN)

HSP 1 Score: 87.8 bits (216), Expect = 2.660e-17
Identity = 50/145 (34.48%), Postives = 75/145 (51.72%), Query Frame = 1
Query:    1 DLLFRFVAFSLLRAVEFLHGRCLTLAASDRSSASAGLLSPRRLTMTAQLWLQVPPPXXXXXXXXXXXXXLPSLRPPLGEDAP--LTVRWSNGWISNFEYLMALNRAAGRGAADGGLHPVLPWVSDLTVEQGGWRDLAQTKYRLKK 429
            D++ +++A+ L++A+ FLH          R       LSP  + +T  LW+ +P               LPSL PP    +   +T  W +G ISN++Y+M LN AAGR   D   H ++PWV D T   GGWRD + +K+R+ K
Sbjct:  237 DIIKQYIAYQLVQALAFLH----------RHRVVYPSLSPTAVILTEYLWVFLP---------------LPSLSPPAFNSSLEYITTSWVSGHISNYDYIMYLNEAAGRSMDDSNFHSIMPWVCDFTSPTGGWRDFSVSKFRMNK 356          
BLAST of mRNA_P-wetherbeei_contig5646.6.1 vs. uniprot
Match: A0A662WYB6_9STRA (BEACH domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WYB6_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 2.680e-17
Identity = 59/144 (40.97%), Postives = 73/144 (50.69%), Query Frame = 1
Query:    1 DLLFRFVAFSLLRAVEFLHGRCLTLAASDRSSASAGLLSPRRLTMTAQLWLQVPPPXXXXXXXXXXXXXLPSLRPPLGEDAPLTVRWSNGWISNFEYLMALNRAAGRGAADGGLHPVLPWVSDLTV-EQGGWRDLAQTKYRLKK 429
            DL  R V   L R + FLH R L          +   L P+ L ++  LWLQ+                LP         + LT RW  G +SN EYLMALN AAGR   DGGLHP +PWV+D T   +GGWRDL ++K+RL K
Sbjct:  235 DLKKRLVLLQLRRLLRFLHARGL----------ACNGLRPQDLQLSDTLWLQLATLPQVLATSSGPPAPLPRDVASCSSRS-LTDRWRTGDVSNLEYLMALNLAAGRRLEDGGLHPFVPWVTDFTSGPRGGWRDLTKSKFRLAK 367          
BLAST of mRNA_P-wetherbeei_contig5646.6.1 vs. uniprot
Match: H3GUD2_PHYRM (BEACH domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GUD2_PHYRM)

HSP 1 Score: 87.4 bits (215), Expect = 3.660e-17
Identity = 63/160 (39.38%), Postives = 74/160 (46.25%), Query Frame = 1
Query:    1 DLLFRFVAFSLLRAVEFLHGRCLTLAASDRSSASAGLLSPRRLTMTAQLWLQVPPPXXXXXXXXXXXXXLPSLRPPLGEDA----------------PLTVRWSNGWISNFEYLMALNRAAGRGAADGGLHPVLPWVSDLTV-EQGGWRDLAQTKYRLKK 429
            DL  R V F L R +EFLH         +R  A  G  SPR L +T  LWL +                  + R    EDA                 +T RW  G ISNFEYLM +N AAGR   DG  HP LPWV+D T    GGWRDL ++K+RL K
Sbjct:  223 DLKKRLVLFQLRRVLEFLH---------ERGLACDGF-SPRDLHLTDTLWLHL-------SALPRVLEACAATRVSKEEDANASVAVPRDVESRSSKSITERWCTGDISNFEYLMTINSAAGRRMEDGAFHPFLPWVTDFTAGPHGGWRDLGKSKFRLTK 365          
BLAST of mRNA_P-wetherbeei_contig5646.6.1 vs. uniprot
Match: F0YG77_AURAN (BEACH domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YG77_AURAN)

HSP 1 Score: 87.4 bits (215), Expect = 3.690e-17
Identity = 59/145 (40.69%), Postives = 74/145 (51.03%), Query Frame = 1
Query:    1 DLLFRFVAFSLLRAVEFLHGRCLTLAASDRSSASAGLLSPRRLTMTAQLWLQVPPPXXXXXXXXXXXXXLPSLRPPLGEDAPLTVRWSNGWISNFEYLMALNRAAGRGAADGGLHPVLPWVSDLTVEQGG--WRDLAQTKYRLKK 429
            DL  RFVA+ LLR +   HG  +         A  G +  R L ++ +LWL+  P               P  RPPL    P+  RW +G +SNFEYL+ LN AAGRG      H V PWVSDL    G   WRDL++TK+RL K
Sbjct: 1092 DLQLRFVAYQLLRCLMAAHGAGV---------AFGGRVDSRSLFVSDRLWLRALP--RVAAVAGEAAGDAPLCRPPLHRK-PVVARWVDGSLSNFEYLVLLNEAAGRGNCLNNDHFVFPWVSDLKSRDGDDHWRDLSKTKFRLNK 1224          
BLAST of mRNA_P-wetherbeei_contig5646.6.1 vs. uniprot
Match: UPI000719DFDD (WD repeat-containing protein 81-like isoform X1 n=2 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719DFDD)

HSP 1 Score: 85.9 bits (211), Expect = 1.250e-16
Identity = 54/140 (38.57%), Postives = 72/140 (51.43%), Query Frame = 1
Query:   16 FVAFSLLRAVEFLHGRCLTLAASDRSSASAGLLSPRRLTMTAQLWLQVPPPXXXXXXXXXXXXXLPSL-RPPLGEDAP-LTVRWSNGWISNFEYLMALNRAAGRGAADGGLHPVLPWVSDLTVEQGGWRDLAQTKYRLKK 429
            FV++ LLR ++  H R +T+          G L+   + +T   W+                  +P L RPP G   P L   W  G +SN++YLMALNR AGR A D   HP+LPWVSD T    GWRDL ++K+RL K
Sbjct:  227 FVSYQLLRLLQACHLRRITV----------GNLTLTDIAITDVYWIHT---------NEANVFSIPMLQRPPNGSCVPDLMQLWVEGLVSNYDYLMALNRLAGRRAGDPNHHPILPWVSDFTSPDSGWRDLTRSKFRLNK 347          
BLAST of mRNA_P-wetherbeei_contig5646.6.1 vs. uniprot
Match: A0A8K1CQ90_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQ90_PYTOL)

HSP 1 Score: 84.0 bits (206), Expect = 5.900e-16
Identity = 53/139 (38.13%), Postives = 70/139 (50.36%), Query Frame = 1
Query:   13 RFVAFSLLRAVEFLHGRCLTLAASDRSSASAGLLSPRRLTMTAQLWLQVPPPXXXXXXXXXXXXXLPSLRPPLGEDAPLTVRWSNGWISNFEYLMALNRAAGRGAADGGLHPVLPWVSDLTVEQGGWRDLAQTKYRLKK 429
            RFV + L + + FLH R LT  A          L+P  + +T  L +++                L          +P T RW  G +SNFEYLM LN AAGR   DG  HPV+PWV+D +   GGWRDL ++K+RL K
Sbjct:  199 RFVVYQLWQLLAFLHERNLTYNA----------LAPHTVLLTGNLLVRLGSVPLLNGVSPVDKPVLHRSVEDATRKSP-TERWCEGDLSNFEYLMILNIAAGRRMVDGLFHPVMPWVTDFSERNGGWRDLTKSKFRLNK 326          
BLAST of mRNA_P-wetherbeei_contig5646.6.1 vs. uniprot
Match: A0A3M6VUT3_9STRA (BEACH domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VUT3_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 2.790e-15
Identity = 58/158 (36.71%), Postives = 74/158 (46.84%), Query Frame = 1
Query:    1 DLLFRFVAFSLLRAVEFLHGRCLTLAASDRSSASAGLLSPRRLTMTAQLWLQVPP--------PXXXXXXXXXXXXXLPSLRPPLGEDAP------LTVRWSNGWISNFEYLMALNRAAGRGAADGGLHPVLPWVSDLTV-EQGGWRDLAQTKYRLKK 429
            DL  R V F L + +EFLH R L          +    SP+ L +T  LWL +                         P++  P+  D        +T RW  G +SNFEYLM LN AAGR   DG  HP LPWV+D T     GWRDL+++K+RL K
Sbjct:  227 DLKKRLVLFQLNQVLEFLHARGL----------ACNGFSPQDLYLTDTLWLHLAALPRVLDACSNVGGESEGGDETIRPNVSIPVSRDVDSCSSRSITERWCIGDLSNFEYLMVLNTAAGRRMEDGVFHPFLPWVTDFTAGPHDGWRDLSKSKFRLNK 374          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5646.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHG8_ECTSI4.670e-2142.01BEACH domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S3K380_9STRA1.010e-1963.08Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
W2KUT5_PHYPR7.790e-1842.86BEACH domain-containing protein n=19 Tax=Phytophth... [more]
A0A196SKP9_BLAHN2.660e-1734.48Serine/threonine kinase n=1 Tax=Blastocystis sp. s... [more]
A0A662WYB6_9STRA2.680e-1740.97BEACH domain-containing protein n=1 Tax=Nothophyto... [more]
H3GUD2_PHYRM3.660e-1739.38BEACH domain-containing protein n=1 Tax=Phytophtho... [more]
F0YG77_AURAN3.690e-1740.69BEACH domain-containing protein n=1 Tax=Aureococcu... [more]
UPI000719DFDD1.250e-1638.57WD repeat-containing protein 81-like isoform X1 n=... [more]
A0A8K1CQ90_PYTOL5.900e-1638.13Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3M6VUT3_9STRA2.790e-1536.71BEACH domain-containing protein n=2 Tax=Peronospor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5646contigP-wetherbeei_contig5646:3200..3649 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LHG8
PFAMsBeach,Pkinase,WD40
Model size450
Max annot lvl2759|Eukaryota
KEGG koko:K17601
Hectar predicted targeting categorysignal peptide
Exons1
Evalue7.65e-22
EggNOG OGsKOG1786@1|root,KOG1786@2759|Eukaryota
Descriptionaggrephagy
Cds size450
COG categoryT
BRITEko00000,ko01009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186839.1934252-CDS-P-wetherbeei_contig5646:3199..36491683186839.1934252-CDS-P-wetherbeei_contig5646:3199..3649Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5646 3200..3649 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5646.6.1prot_P-wetherbeei_contig5646.6.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5646 3200..3649 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5646.6.1

>prot_P-wetherbeei_contig5646.6.1 ID=prot_P-wetherbeei_contig5646.6.1|Name=mRNA_P-wetherbeei_contig5646.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=150bp
DLLFRFVAFSLLRAVEFLHGRCLTLAASDRSSASAGLLSPRRLTMTAQLW
LQVPPPPPPPPSPPLPPLPLPSLRPPLGEDAPLTVRWSNGWISNFEYLMA
LNRAAGRGAADGGLHPVLPWVSDLTVEQGGWRDLAQTKYRLKKVRGKGE*
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mRNA from alignment at P-wetherbeei_contig5646:3200..3649+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5646.6.1 ID=mRNA_P-wetherbeei_contig5646.6.1|Name=mRNA_P-wetherbeei_contig5646.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=450bp|location=Sequence derived from alignment at P-wetherbeei_contig5646:3200..3649+ (Phaeothamnion wetherbeei SAG_119_79)
GATCTGCTCTTTCGTTTCGTGGCCTTTTCGCTGCTGCGCGCGGTAGAGTT TTTGCACGGCCGCTGCCTGACTCTCGCTGCATCGGACCGCAGCAGCGCTT CGGCCGGCCTGCTTTCGCCCCGGCGCCTGACAATGACGGCTCAGCTTTGG CTGCAGGTGCCGCCGCCACCGCCGCCGCCGCCGTCGCCGCCGCTTCCACC GTTGCCGCTTCCGTCGCTGCGGCCGCCGCTGGGAGAGGATGCGCCACTGA CGGTGCGGTGGTCCAACGGCTGGATTAGCAACTTCGAGTACCTCATGGCG CTGAACAGGGCCGCCGGGCGCGGGGCCGCCGACGGCGGCCTTCATCCGGT GCTCCCCTGGGTCAGCGATCTGACCGTAGAGCAGGGAGGCTGGAGGGACC TGGCTCAGACAAAGTACCGCCTCAAAAAGGTGCGGGGTAAGGGAGAGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5646:3200..3649+

>mRNA_P-wetherbeei_contig5646.6.1 ID=mRNA_P-wetherbeei_contig5646.6.1|Name=mRNA_P-wetherbeei_contig5646.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=450bp|location=Sequence derived from alignment at P-wetherbeei_contig5646:3200..3649+ (Phaeothamnion wetherbeei SAG_119_79)
GATCTGCTCTTTCGTTTCGTGGCCTTTTCGCTGCTGCGCGCGGTAGAGTT
TTTGCACGGCCGCTGCCTGACTCTCGCTGCATCGGACCGCAGCAGCGCTT
CGGCCGGCCTGCTTTCGCCCCGGCGCCTGACAATGACGGCTCAGCTTTGG
CTGCAGGTGCCGCCGCCACCGCCGCCGCCGCCGTCGCCGCCGCTTCCACC
GTTGCCGCTTCCGTCGCTGCGGCCGCCGCTGGGAGAGGATGCGCCACTGA
CGGTGCGGTGGTCCAACGGCTGGATTAGCAACTTCGAGTACCTCATGGCG
CTGAACAGGGCCGCCGGGCGCGGGGCCGCCGACGGCGGCCTTCATCCGGT
GCTCCCCTGGGTCAGCGATCTGACCGTAGAGCAGGGAGGCTGGAGGGACC
TGGCTCAGACAAAGTACCGCCTCAAAAAGGTGCGGGGTAAGGGAGAGTGA
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