mRNA_P-wetherbeei_contig5643.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5643.1.1 vs. uniprot
Match: D7FMQ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMQ3_ECTSI) HSP 1 Score: 135 bits (341), Expect = 1.970e-30 Identity = 78/203 (38.42%), Postives = 104/203 (51.23%), Query Frame = 3
Query: 507 RCCVRERVGYKPLAFRALLRARWPNLRSCFGTMQEAFRAYHFLAEDSVLRHLDPGATARAPPPA--VSEWASLGPLPRCSVCTLPPPCRHVSEEQLAAAGRRRRADLP--RQPPGS---------------LPCPGFLRTGACDLFNRCGRCSLDHPPRKHGVVTLAPRCPICTIRRPCGRCPYDAARAAFLAACDGVEAELR 1058
R RE VG++ LA + + RA WP+L+ C + F FL+E++ L+ + P A + V SL PL C CTL PPC+H+SE++LA+ G RRR +LP R P S + C F+ GAC FN GRCS HP H V PRCP CTIR PCG C YD +R + C+ A ++
Sbjct: 148 RILERENVGFELLAVKVIFRAYWPDLQQCIAAANKVFCEREFLSEENALKAIAPKTLAAREEMSHHVKASDSLEPLGVCQACTLRPPCQHISEQELASRGMRRRMELPQRRGPQESTQEGKGGKGDGEKDFVDCQDFVMRGACRSFNERGRCSNHHPLDAHVVEVPKPRCPQCTIRLPCGHCDYDQSRRSLHTFCEAAGARIQ 350
BLAST of mRNA_P-wetherbeei_contig5643.1.1 vs. uniprot
Match: F0XZM9_AURAN (AAA domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZM9_AURAN) HSP 1 Score: 118 bits (296), Expect = 5.030e-24 Identity = 73/203 (35.96%), Postives = 106/203 (52.22%), Query Frame = 3
Query: 441 ARHAVFLRMMPPNLEDSLRILLRCCVRERVGYKPLAFRALL---RARWPNLRSCFGTMQEAFRAYHFLAEDSVLRHLDPGA-TARAPPPAVSEWASLG-PLPRCSVCTLPPPCRHVSEEQLAAAGRRRRADLPRQPPGSLPCPGFLRTGACDLFNRCGRCSLDHPPRKHGVVTLAPRCPICTIRRPCGRCPYDAARAAFLAAC 1034
A+ L M + D+L + L RERVGY+ L +A L ++Q F + + + +V + P A A+ ++ A+LG P+ RC+VCTL PPC+HVSE++LA G RRA LP + S+ C F++ G+C +FN G CSLDHP H VV RCP CT+ PC C + +R + +C
Sbjct: 252 AKRCAILPMRRLDKGDALGVFLNVASRERVGYEHRGAVMLFEHAKAGRGELGRAVRSLQRVFAKWEYASYVNVCKEFAPDAFNAKR---KIAAKAALGDPIDRCAVCTLRPPCQHVSEQELATRGLARRAQLPERD-DSIDCTNFVKCGSCRVFNEFGHCSLDHPSTLHCVVLPPHRCPQCTLVWPCQHCSFSGSRNRLIESC 450
BLAST of mRNA_P-wetherbeei_contig5643.1.1 vs. uniprot
Match: A0A7S3HQW6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQW6_9STRA) HSP 1 Score: 107 bits (268), Expect = 5.730e-24 Identity = 51/132 (38.64%), Postives = 75/132 (56.82%), Query Frame = 3
Query: 579 NLRSCFGTMQEAFRAYHFLAEDSVLRHLDPGATARAPPPAVSEWASLGPLPRCSVCTLPPPCRHVSEEQLAAAGRRRRADLPRQPPGSLPCPGFLRTGACDLFNRCGRCSLDHPPRKHGVVTLAPRCPICTI 974
+L +Q+ F +++ ++V++ A + P +S+ ++ P RC +CTL PPC+HV+ E+L G RR +LPR GS+ CP F+R G C +FN G CSLDHP H V A RCP C+I
Sbjct: 1 SLSKMLDLIQDVFLKEQYISRENVMKVTTGKAGDASDLPVISQHRAVEPFDRCKLCTLLPPCQHVTMEELIQRGIARRKELPRYKVGSMSCPSFVRYGYCVMFNEHGHCSLDHPKNLHVVKKFAVRCPQCSI 132
BLAST of mRNA_P-wetherbeei_contig5643.1.1 vs. uniprot
Match: A0A8J2SD56_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SD56_9STRA) HSP 1 Score: 110 bits (275), Expect = 1.060e-21 Identity = 56/138 (40.58%), Postives = 79/138 (57.25%), Query Frame = 3
Query: 603 MQEAFRAYHFLAEDSVLRHLDPGATARAPPPAVSEWASLG-PLPRCSVCTLPPPCRHVSEEQLAAAGRRRRADLPRQPPGSLPCPGFLRTGACDLFNRCGRCSLDHPPRKHGVVTLAPRCPICTIRRPCGRCPYDAAR 1013
+Q F + F++E +V + P A P + A++G P PRC +CTLP PC H E++LA+ G RR +LPR +L CP F++ G C +FN G CSLDHP +H V+ +CP CT+ PC C + AR
Sbjct: 308 LQRCFVKWDFVSEMNVTKEFCPEAFIA--PKTIQAGAAMGVPAPRCPICTLPMPCAHCDEQELASQGLERREELPRYE-NALACPCFVKYGYCRVFNEFGHCSLDHPRDRHDVIKPPLKCPQCTMVWPCRHCNFTRAR 442
BLAST of mRNA_P-wetherbeei_contig5643.1.1 vs. uniprot
Match: T0R283_SAPDV (AAA domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R283_SAPDV) HSP 1 Score: 103 bits (256), Expect = 1.460e-19 Identity = 59/179 (32.96%), Postives = 91/179 (50.84%), Query Frame = 3
Query: 465 MMPPNLEDSLRILLRCCVRERVGYKPLAFRALLRARWPNLRSCFGTMQEAFRAYHFLAEDSVLRHLDPGATARAPPPAVSEWASLGPLPRCSVCTLPPPCRHVSEEQLAAAGRRRRADLPRQPPGSLPCPGFLRTGACDLFNRCGRCSLDHPPRKHGVVT--LAPRCPICTIRRPCGRC 995
++P L +LR C ER+GY+ A +L+ R +Q+ F +H+L+ ++V + L A +S PL RC+VCTL PPC+H++ +++ A R+ P+ ++ CP F RTG C F+R +C DHP H + T LAPRC + T+ PC C
Sbjct: 208 LVPLTPAHVLEKVLRICTSERIGYERSAIESLVARRKAKCVPTVQLLQKLFLTHHYLSTENVRKSLPANTGAETNSRVLSIPEVTFPLRRCTVCTLLPPCKHITLDKMYAKVSHMRSLYPQDNQRAV-CPDFARTGVCHAFHRRAKCLYDHPLELHEIDTSPLAPRCKVHTLPLPCAHC 385
BLAST of mRNA_P-wetherbeei_contig5643.1.1 vs. uniprot
Match: A0A067CV06_SAPPC (AAA domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CV06_SAPPC) HSP 1 Score: 102 bits (253), Expect = 3.420e-19 Identity = 58/166 (34.94%), Postives = 87/166 (52.41%), Query Frame = 3
Query: 504 LRCCVRERVGYKPLAFRALLRARWPNLRSCFGTMQEAFRAYHFLAEDSVLRHLDPGATARAPPPAVSEWASLGPLPRCSVCTLPPPCRHVSEEQLAAAGRRRRADLPRQPPGSLPCPGFLRTGACDLFNRCGRCSLDHPPRKHGVVT--LAPRCPICTIRRPCGRC 995
LR C RER+GY A +L+ + +Q F ++H+L+ ++V + L A+ +S PL RC+VCTL PPC+H++ +++ A RA P+ ++ CP F RTG C F+R +C DHP H + T LAPRC + T+ PC C
Sbjct: 221 LRICTRERIGYVRSAIESLVARKKAKCIPSVQLLQTLFLSHHYLSVENVRKSLVTKASTEPANRVLSIPEVTFPLRRCTVCTLLPPCKHITLDKMYAKVSHMRALYPQDNQRAV-CPDFARTGVCHAFHRRAKCLYDHPLELHDIDTSPLAPRCRVHTLPLPCDHC 385
BLAST of mRNA_P-wetherbeei_contig5643.1.1 vs. uniprot
Match: A0A1V9YDP1_9STRA (AAA domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YDP1_9STRA) HSP 1 Score: 100 bits (248), Expect = 1.610e-18 Identity = 61/166 (36.75%), Postives = 88/166 (53.01%), Query Frame = 3
Query: 513 CVRERVGYKPLAFRALLRARWPNLRSCFGTMQEAFRAYHFLAEDSVLRHLDPGATARA--PPPAVSEWASLG-PLPRCSVCTLPPPCRHVSEEQLAAAGRRRRADLPRQPPGSLPCPGFLRTGACDLFNRCGRCSLDHPPRKHGVVT--LAPRCPICTIRRPCGRC 995
C +RVG+ A +L + C +Q+ F YH+L+ ++V + +T RA PP +V + PL RC+VCTL PPC+HVS ++L +R R+ P ++ CP F RTG C F+R +C DHP H + T LAPRC + T+ PC C
Sbjct: 236 CTLQRVGFVRGAIEYILSRKKHKCIPCVQLLQKLFVTYHYLSVENVRK----ASTRRAADPPESVLSIVDVTYPLRRCAVCTLLPPCKHVSLQKLYDRVQRMRSLYPTDNQRAV-CPDFARTGVCHAFHRRSKCLYDHPGELHTIDTTPLAPRCKVHTLTLPCAHC 396
BLAST of mRNA_P-wetherbeei_contig5643.1.1 vs. uniprot
Match: A0A1V9ZC90_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZC90_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 1.600e-13 Identity = 53/167 (31.74%), Postives = 82/167 (49.10%), Query Frame = 3
Query: 501 LLRCCVRERVGYKPLAFRALLRARWPNLRSCFGTMQEAFRAYHFLAEDSVLRHLDPGATARAPPPAVSEWASLGPLPRCSVCTLPPPCRHVSEEQLAAAGRRRRADLPRQPPGSLPCPGFLRTGACDLFNRCGRCSLDHPPRKHGVVT--LAPRCPICTIRRPCGRC 995
+LR C +ER+GY A +L + +Q+ F +H+L+ ++V + + + E + PL RC +CTL PPC H++ + + R R+ P+ ++ CP F RTG C F+R G+C DHP + T LA RC I T+ PC C
Sbjct: 213 ILRICTQERIGYVRAALEMILSKKKYKCIPSLQYLQQLFIKHHYLSVENVRKSMKHSEDICQRKFTIVELSF--PLRRCQICTLFPPCNHITLQMMYDKLIRMRSLYPQDNQRTV-CPDFSRTGLCHAFHRRGKCLYDHPLEMLQIDTTPLASRCKIHTLLLPCVHC 376 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5643.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5643.1.1 >prot_P-wetherbeei_contig5643.1.1 ID=prot_P-wetherbeei_contig5643.1.1|Name=mRNA_P-wetherbeei_contig5643.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=455bp MMPPNLEDSLRILLRCCVRERVGYKPLAFRALLRARWPNLRSCFGTMQEAback to top mRNA from alignment at P-wetherbeei_contig5643:295..2453+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5643.1.1 ID=mRNA_P-wetherbeei_contig5643.1.1|Name=mRNA_P-wetherbeei_contig5643.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2159bp|location=Sequence derived from alignment at P-wetherbeei_contig5643:295..2453+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5643:295..2453+ >mRNA_P-wetherbeei_contig5643.1.1 ID=mRNA_P-wetherbeei_contig5643.1.1|Name=mRNA_P-wetherbeei_contig5643.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1365bp|location=Sequence derived from alignment at P-wetherbeei_contig5643:295..2453+ (Phaeothamnion wetherbeei SAG_119_79)back to top |