mRNA_P-wetherbeei_contig5635.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5635.1.1
Unique NamemRNA_P-wetherbeei_contig5635.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig5635.1.1 vs. uniprot
Match: A0A6H5KWK2_9PHAE (Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWK2_9PHAE)

HSP 1 Score: 233 bits (593), Expect = 6.550e-68
Identity = 123/260 (47.31%), Postives = 151/260 (58.08%), Query Frame = 2 
Query:  503 EILPLKTVEDIMGYSGPPESAKFA--RRMPFVAPPLLPHRPKLLVCHDMAGGYVEDRWVQGGDYDMAYRLYDWGMVDTFVYFSHNLVTAPPVGWCNVAHRHGTRVLGTFITEWEAGAAVCARLFATVAGAEDLARRLAAVARDYGFDGWLVNIENPLEPLEEGE--ARSGXXXXXXXXXXXXXXXXXXXXXXXXSMRASTNSGAAPR-----------------VIWYDSVTVGGDLCWQNCLNANNKAFFDCCDGIFTN 1219
            EILPL ++ +++ Y GP     FA  R +PFVA P  P + +LLVCHD+AGGY +DR VQGG YD  YR YDWG++D FVYFSHNLVT P  GW +VAHRHGTRVLGTFITEW+ G  VC +L  +   A+  A +L  +A D+GFDGWL+NIEN ++P E  +  A                           S  A   SG  P                  V+WYDSVT  G L WQ+CLN  N+ FFD CDGIF+N
Sbjct:  119 EILPLTSLGELLSYEGPGWGQGFAPARPLPFVAAPFPPLKSRLLVCHDLAGGYGQDRLVQGGGYDRPYRAYDWGLIDIFVYFSHNLVTIPTAGWIDVAHRHGTRVLGTFITEWDKGYDVCEKLLRSEETADRAAAKLTQIAVDHGFDGWLINIENKVDPGERVDVLAHFLRSLTAQMRAATLSGSTSVGGGSSPSTAAPVMSGGGPEDGKPGTAGTAGGHSRSTVLWYDSVTAEGKLEWQDCLNGENRVFFDACDGIFSN 378
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BLAST of mRNA_P-wetherbeei_contig5635.1.1 vs. uniprot
Match: D8LQD7_ECTSI (Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQD7_ECTSI)

HSP 1 Score: 225 bits (574), Expect = 8.540e-62
Identity = 137/262 (52.29%), Postives = 165/262 (62.98%), Query Frame = 2 
Query:  503 EILPLKTVEDIMGYSGPPESAKFA--RRMPFVAPPLLPHRPKLLVCHDMAGGYVEDRWVQGGDYDMAYRLYDWGMVDTFVYFSHNLVTAPPVGWCNVAHRHGTRVLGTFITEWEAGAAVCARLFATVAGAEDLARRLAAVARDYGFDGWLVNIENPLEPLEE---------------------GEARSGXXXXXXXXXXXXXXXXXXXXXXXXSMRASTNSGAAPRVIWYDSVTVGGDLCWQNCLNANNKAFFDCCDGIFTN 1219
            EILPL T+ +++ Y GP     FA  R +PFVA P  P + +LLVCHD+AGGY +DR VQGG YD  YR YDWG++D FVYFSH+LVT P  GW +VAHRHGTRVLGTFITEW+ G  VC  L  +   A+  A +L  +A D+GFDGWLVNIEN ++P E                      G    GXXXXXXXXXXXXXXX         +  A  +S +   V+WYDSVTV G L WQ+ LN  N+ FFD CDGIF+N
Sbjct:  120 EILPLTTLGELLSYEGPGWGQGFAPARPLPFVAAPFPPLKSRLLVCHDLAGGYGQDRLVQGGGYDRPYRAYDWGLIDIFVYFSHDLVTIPTAGWIDVAHRHGTRVLGTFITEWDKGYDVCEELLRSEETADRAAAKLTQIAVDHGFDGWLVNIENKVDPGERVDVLAYFLRSLTAQMRAATLSGSTSVGXXXXXXXXXXXXXXXGPEDGKPGTAGTAGGHSRST--VLWYDSVTVEGKLEWQDRLNGENRVFFDACDGIFSN 379
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BLAST of mRNA_P-wetherbeei_contig5635.1.1 vs. uniprot
Match: I1M7Q9_SOYBN (Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=4 Tax=Glycine subgen. Soja TaxID=1462606 RepID=I1M7Q9_SOYBN)

HSP 1 Score: 206 bits (524), Expect = 3.290e-56
Identity = 102/205 (49.76%), Postives = 127/205 (61.95%), Query Frame = 2 
Query:  605 LPHRPKLLVCHDMAGGYVEDRWVQGGDYDMAYRLYDWGMVDTFVYFSHNLVTAPPVGWCNVAHRHGTRVLGTFITEWEAGAAVCARLFATVAGAEDLARRLAAVARDYGFDGWLVNIENPLEPLEEGEARSGXXXXXXXXXXXXXXXXXXXXXXXXSMRASTNSGAAPRVIWYDSVTVGGDLCWQNCLNANNKAFFDCCDGIFTN 1219
            LP+R ++LVCHDMAGGY++D+WVQGG    AY ++ W ++D FVYFSHNLVT PP  W N AHRHG +VLGTFITEW  G A C +L +T   A+  A+ LA +A + GFDGWL+NIE  L+P +    +                          +M +S        VIWYDSVT+ GDL WQN LN  NK+FFD CDGIFTN
Sbjct:   58 LPNRRRILVCHDMAGGYLDDKWVQGGTNAEAYAIWHWHLIDVFVYFSHNLVTLPPPSWTNTAHRHGVKVLGTFITEWNEGKAACDKLLSTKESAQMYAKHLAELAANLGFDGWLLNIEVTLKPEQISNLKE------------------FVNHLSLTMHSSVTGSL---VIWYDSVTINGDLWWQNELNEYNKSFFDICDGIFTN 241
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BLAST of mRNA_P-wetherbeei_contig5635.1.1 vs. uniprot
Match: A0A0P4WC22_SCYOL (Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=1 Tax=Scylla olivacea TaxID=85551 RepID=A0A0P4WC22_SCYOL)

HSP 1 Score: 195 bits (496), Expect = 8.280e-55
Identity = 99/201 (49.25%), Postives = 122/201 (60.70%), Query Frame = 2 
Query:  617 PKLLVCHDMAGGYVEDRWVQGGDYDMAYRLYDWGMVDTFVYFSHNLVTAPPVGWCNVAHRHGTRVLGTFITEWEAGAAVCARLFATVAGAEDLARRLAAVARDYGFDGWLVNIENPLEPLEEGEARSGXXXXXXXXXXXXXXXXXXXXXXXXSMRASTNSGAAPRVIWYDSVTVGGDLCWQNCLNANNKAFFDCCDGIFTN 1219
            P+ LVCHDM GGY++DR+V G +   AYR Y W  VDTFVYFSH+LVT PP+GW N AH HG  VLGTFITEWEAG+AVC +L A+        R+L  +A  YGF+GWL+NIEN + P+E+                               ++   ++    RVIWYDSVT  G+L WQN LN+ N AFFD CDGIF N
Sbjct:   53 PRTLVCHDMKGGYLDDRFVFGTNNKDAYRFYHWSGVDTFVYFSHHLVTIPPLGWINAAHLHGVTVLGTFITEWEAGSAVCKKLLASEETVALAVRQLVCIANHYGFEGWLINIENEV-PIEKIPLMLKFVEDLTKAMRKRETDKETENAGEDKVKEDNDN--CHRVIWYDSVTENGELKWQNALNSQNYAFFDACDGIFLN 250
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BLAST of mRNA_P-wetherbeei_contig5635.1.1 vs. uniprot
Match: A0A445HH90_GLYSO (Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=2 Tax=Glycine soja TaxID=3848 RepID=A0A445HH90_GLYSO)

HSP 1 Score: 199 bits (506), Expect = 8.620e-55
Identity = 101/205 (49.27%), Postives = 125/205 (60.98%), Query Frame = 2 
Query:  605 LPHRPKLLVCHDMAGGYVEDRWVQGGDYDMAYRLYDWGMVDTFVYFSHNLVTAPPVGWCNVAHRHGTRVLGTFITEWEAGAAVCARLFATVAGAEDLARRLAAVARDYGFDGWLVNIENPLEPLEEGEARSGXXXXXXXXXXXXXXXXXXXXXXXXSMRASTNSGAAPRVIWYDSVTVGGDLCWQNCLNANNKAFFDCCDGIFTN 1219
            LP+R +LLVCHDMAGGY++D+WVQGG    AY ++ W ++D FVYFSH+LVT PP  W N AHRHG +VLGTFITEW+ G AVC  + +T   A   A RLA +A D GFDGWL+N+E  L+P +    +                          +M +S        VIWYDSVTV G L WQ+ LN +NK FFD CDGIF N
Sbjct:  125 LPNRRRLLVCHDMAGGYLDDKWVQGGTNPDAYAIWHWHLIDVFVYFSHSLVTLPPPSWTNTAHRHGVKVLGTFITEWDEGKAVCDTMLSTKETAHMYAERLAELAADLGFDGWLINMEVNLDPGQISNLKE------------------FVAHLSLTMHSSVPGSL---VIWYDSVTVDGKLNWQDQLNEHNKPFFDICDGIFVN 308
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BLAST of mRNA_P-wetherbeei_contig5635.1.1 vs. uniprot
Match: A0A1R3I048_9ROSI (Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3I048_9ROSI)

HSP 1 Score: 198 bits (503), Expect = 3.180e-54
Identity = 112/247 (45.34%), Postives = 136/247 (55.06%), Query Frame = 2 
Query:  500 PEILPLKTVEDIMGYSGPPESAKFARRMPFVAPPLLPH-----RPKLLVCHDMAGGYVEDRWVQGGDYDMAYRLYDWGMVDTFVYFSHNLVTAPPVGWCNVAHRHGTRVLGTFITEWEAGAAVCARLFATVAGAEDLARRLAAVARDYGFDGWLVNIENPLEPLEEGEARSGXXXXXXXXXXXXXXXXXXXXXXXXSMRASTNSGAAPR--VIWYDSVTVGGDLCWQNCLNANNKAFFDCCDGIFTN 1219
            P   P+KT+ED+   S       F       + PL P+     RP++LVCHDM GGYV+D+WVQGGD   AY ++ W ++D FVYFSHNLVT PP  W N AHRHG +VLGTFITEW+ G A+C +L AT   A   A  LA +A   GFDGWL+N+E  L+  +    +                          S    T     P   VIWYDSVT+ GDL WQN LN  NK FFD CDGIF N
Sbjct:   71 PISYPIKTLEDLDSGS---YFTSFHYPFNVSSVPLQPNSGLAPRPRILVCHDMQGGYVDDKWVQGGDNPGAYAIWHWYLIDVFVYFSHNLVTLPPPCWTNTAHRHGVKVLGTFITEWDEGRAICNKLLATKESAHKYAELLAKLAVALGFDGWLLNMEVKLDVEQIPNLKE-----------------------FASHLTQTMHSLLPGSLVIWYDSVTIDGDLDWQNQLNDKNKPFFDICDGIFAN 291
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BLAST of mRNA_P-wetherbeei_contig5635.1.1 vs. uniprot
Match: G7J2C1_MEDTR (Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=2 Tax=Medicago truncatula TaxID=3880 RepID=G7J2C1_MEDTR)

HSP 1 Score: 201 bits (510), Expect = 3.590e-54
Identity = 101/207 (48.79%), Postives = 127/207 (61.35%), Query Frame = 2 
Query:  605 LPHRPKLLVCHDMAGGYVEDRWVQGGDYDMAYRLYDWGMVDTFVYFSHNLVTAPPVGWCNVAHRHGTRVLGTFITEWEAGAAVCARLFATVAGAEDLARRLAAVARDYGFDGWLVNIENPLEPLEEGEARSGXXXXXXXXXXXXXXXXXXXXXXXXSMRASTNSGAAP--RVIWYDSVTVGGDLCWQNCLNANNKAFFDCCDGIFTN 1219
            LP R +LLVCHDMAGGY +D+W+QGGD   AY ++ W ++D FVYFSH+LVT PPV W N AHRHG +VLGTFITEW+ G A C  L +T   A+  A RLA +A D GFDGWL+N+E  L+P +    +                             +ST   + P  +V+WYDSVT+ G L WQ+ LN +NK FFD CDGIF N
Sbjct:   97 LPDRRRLLVCHDMAGGYSDDKWIQGGDNVNAYSIWHWHLIDVFVYFSHDLVTLPPVCWINTAHRHGVKVLGTFITEWDEGKANCDVLLSTKESAQMYAERLAELAVDLGFDGWLINMEVELDPAQISNLKE-----------------------FVDHLSSTMHSSVPGSQVLWYDSVTIDGKLNWQDQLNESNKPFFDICDGIFVN 280
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BLAST of mRNA_P-wetherbeei_contig5635.1.1 vs. uniprot
Match: UPI001E1D0310 (cytosolic endo-beta-N-acetylglucosaminidase-like isoform X3 n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1D0310)

HSP 1 Score: 192 bits (489), Expect = 4.210e-54
Identity = 107/239 (44.77%), Postives = 137/239 (57.32%), Query Frame = 2 
Query:  503 EILPLKTVEDIMGYSGPPESAKFARRMPFVAPPLLPHRPKLLVCHDMAGGYVEDRWVQGGDYDMAYRLYDWGMVDTFVYFSHNLVTAPPVGWCNVAHRHGTRVLGTFITEWEAGAAVCARLFATVAGAEDLARRLAAVARDYGFDGWLVNIENPLEPLEEGEARSGXXXXXXXXXXXXXXXXXXXXXXXXSMRASTNSGAAPRVIWYDSVTVGGDLCWQNCLNANNKAFFDCCDGIFTN 1219
            E+ PL +++++M +S P  ++   R      PP    R   LVCHDM GGY++DR+V G     AYR Y W  VDTF+YFSH+LVT PP+GW N AH HG  VLGTFITEWEAG+AVC  L   V     + ++L  +A+ YGFDGWL+NIEN + P+++                              ++R   N     RVIWYDSVT  G+L WQN LN+ N AFF  CDGIF N
Sbjct:    3 EVQPLSSLKELMEWSMPCLTSNIHRERLRARPPSSHLR--TLVCHDMKGGYLDDRFVSGTSNKDAYRFYHWSGVDTFIYFSHHLVTIPPLGWINAAHLHGVPVLGTFITEWEAGSAVCKDLLNDVKTVTQVVQKLVNIAKYYGFDGWLINIENEV-PIDK--------------VPLMLMFVEKLTVAMRNVRYDKN--CHHRVIWYDSVTKNGELKWQNELNSQNYAFFFACDGIFLN 222
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BLAST of mRNA_P-wetherbeei_contig5635.1.1 vs. uniprot
Match: A0A1U8P5C6_GOSHI (Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=1 Tax=Gossypium hirsutum TaxID=3635 RepID=A0A1U8P5C6_GOSHI)

HSP 1 Score: 194 bits (494), Expect = 5.220e-54
Identity = 98/205 (47.80%), Postives = 122/205 (59.51%), Query Frame = 2 
Query:  605 LPHRPKLLVCHDMAGGYVEDRWVQGGDYDMAYRLYDWGMVDTFVYFSHNLVTAPPVGWCNVAHRHGTRVLGTFITEWEAGAAVCARLFATVAGAEDLARRLAAVARDYGFDGWLVNIENPLEPLEEGEARSGXXXXXXXXXXXXXXXXXXXXXXXXSMRASTNSGAAPRVIWYDSVTVGGDLCWQNCLNANNKAFFDCCDGIFTN 1219
            LP RP+LLVCHDM GGYV+D+W+QGG    AY ++ W ++D FVYFSHNLVT PP  W N AHRHG +VLGTFITEW+ GAA+C +L +T   A   A RLA +A   GFDGWL+N+E  ++  +    +                            +   +S     VIWYDSVT+ G+L WQN LN  NK FFD  DGIF N
Sbjct:  102 LPPRPRLLVCHDMQGGYVDDKWIQGGHNSGAYSIWHWYLIDVFVYFSHNLVTLPPPCWTNTAHRHGVKVLGTFITEWDEGAAICKKLLSTKESAHKYAERLAELAVALGFDGWLLNLEVKVDIGQIPNLKE---------------------FVGHLTQTIHSSLPGSLVIWYDSVTIDGELSWQNQLNEKNKPFFDISDGIFIN 285
[Close]
BLAST of mRNA_P-wetherbeei_contig5635.1.1 vs. uniprot
Match: A0A0K9QFS3_SPIOL (Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase (Fragment) n=3 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9QFS3_SPIOL)

HSP 1 Score: 190 bits (482), Expect = 6.290e-54
Identity = 97/206 (47.09%), Postives = 124/206 (60.19%), Query Frame = 2 
Query:  605 LPHRPKLLVCHDMAGGYVED-RWVQGGDYDMAYRLYDWGMVDTFVYFSHNLVTAPPVGWCNVAHRHGTRVLGTFITEWEAGAAVCARLFATVAGAEDLARRLAAVARDYGFDGWLVNIENPLEPLEEGEARSGXXXXXXXXXXXXXXXXXXXXXXXXSMRASTNSGAAPRVIWYDSVTVGGDLCWQNCLNANNKAFFDCCDGIFTN 1219
            LP +P+LLVCHDMAGGY++D +WVQGG    AY ++ W ++D FVYFSHNL+T PP  W N AH+HG +VLGTF+TEW+ G  V  +L ++ A A   A RLA ++   GFDGWL+N+E  + P +    +                           M   +  G+   VIWYDSVTV GDL WQ+ LN  NKAFFD CDGIF N
Sbjct:   63 LPPKPRLLVCHDMAGGYLDDDKWVQGGANSDAYAIWHWYLMDVFVYFSHNLITIPPPSWVNAAHKHGVKVLGTFLTEWDEGRIVSDQLLSSTAYARMCAERLAELSVALGFDGWLINMEVKINPSDVANLKE-------------------FVNHLTDMMHMSKPGSL--VIWYDSVTVHGDLAWQDQLNDKNKAFFDLCDGIFIN 247
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5635.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWK2_9PHAE6.550e-6847.31Mannosyl-glycoprotein endo-beta-N-acetylglucosamin... [more]
D8LQD7_ECTSI8.540e-6252.29Mannosyl-glycoprotein endo-beta-N-acetylglucosamin... [more]
I1M7Q9_SOYBN3.290e-5649.76Mannosyl-glycoprotein endo-beta-N-acetylglucosamin... [more]
A0A0P4WC22_SCYOL8.280e-5549.25Mannosyl-glycoprotein endo-beta-N-acetylglucosamin... [more]
A0A445HH90_GLYSO8.620e-5549.27Mannosyl-glycoprotein endo-beta-N-acetylglucosamin... [more]
A0A1R3I048_9ROSI3.180e-5445.34Mannosyl-glycoprotein endo-beta-N-acetylglucosamin... [more]
G7J2C1_MEDTR3.590e-5448.79Mannosyl-glycoprotein endo-beta-N-acetylglucosamin... [more]
UPI001E1D03104.210e-5444.77cytosolic endo-beta-N-acetylglucosaminidase-like i... [more]
A0A1U8P5C6_GOSHI5.220e-5447.80Mannosyl-glycoprotein endo-beta-N-acetylglucosamin... [more]
A0A0K9QFS3_SPIOL6.290e-5447.09Mannosyl-glycoprotein endo-beta-N-acetylglucosamin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5635contigP-wetherbeei_contig5635:1815..3579 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LQD7
Preferred nameENGASE
PFAMsGlyco_hydro_85
Model size1249
Max annot lvl2759|Eukaryota
KEGG koko:K01227,ko:K20308
KEGG Pathwayko00511,map00511
Hectar predicted targeting categorysignal anchor
GOsGO:0000270,GO:0000323,GO:0003674,GO:0003824,GO:0004553,GO:0004563,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005773,GO:0005829,GO:0005975,GO:0006022,GO:0006026,GO:0006027,GO:0006457,GO:0006464,GO:0006491,GO:0006517,GO:0006807,GO:0008092,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009100,GO:0009253,GO:0009605,GO:0009607,GO:0009617,GO:0009987,GO:0015929,GO:0016052,GO:0016231,GO:0016787,GO:0016798,GO:0017022,GO:0019538,GO:0030203,GO:0033925,GO:0035821,GO:0036211,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044033,GO:0044035,GO:0044040,GO:0044041,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044278,GO:0044419,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051672,GO:0051704,GO:0051707,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575
Exons4
Evalue3.63e-63
EggNOG OGsCOG4724@1|root,KOG2331@2759|Eukaryota
EC3.2.1.96
Descriptionmannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity
Cds size1113
COG categoryG
BRITEko00000,ko00001,ko01000,ko04131
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186837.9925463-UTR-P-wetherbeei_contig5635:1814..19501683186837.9925463-UTR-P-wetherbeei_contig5635:1814..1950Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5635 1815..1950 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186838.0053024-CDS-P-wetherbeei_contig5635:1950..23711683186838.0053024-CDS-P-wetherbeei_contig5635:1950..2371Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5635 1951..2371 +
1683186838.0152082-CDS-P-wetherbeei_contig5635:2477..26221683186838.0152082-CDS-P-wetherbeei_contig5635:2477..2622Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5635 2478..2622 +
1683186838.0251765-CDS-P-wetherbeei_contig5635:2927..33001683186838.0251765-CDS-P-wetherbeei_contig5635:2927..3300Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5635 2928..3300 +
1683186838.0354865-CDS-P-wetherbeei_contig5635:3405..35791683186838.0354865-CDS-P-wetherbeei_contig5635:3405..3579Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5635 3406..3579 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5635.1.1prot_P-wetherbeei_contig5635.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5635 1951..3579 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5635.1.1

>prot_P-wetherbeei_contig5635.1.1 ID=prot_P-wetherbeei_contig5635.1.1|Name=mRNA_P-wetherbeei_contig5635.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=371bp
MDDPPPSLRQGLSGDRAIVLALLLGAASITYWYWSNRFYYKEQARAESVL
LRLQARQGSASNTESLHSGPDNGTRSNLSLEGAAVTSQKAISLPADPCAY
LVELRDHAAIAASAATAADWRPEILPLKTVEDIMGYSGPPESAKFARRMP
FVAPPLLPHRPKLLVCHDMAGGYVEDRWVQGGDYDMAYRLYDWGMVDTFV
YFSHNLVTAPPVGWCNVAHRHGTRVLGTFITEWEAGAAVCARLFATVAGA
EDLARRLAAVARDYGFDGWLVNIENPLEPLEEGEARSGGGSGGGGGGSSS
GGGNGGGSGGGNSMRASTNSGAAPRVIWYDSVTVGGDLCWQNCLNANNKA
FFDCCDGIFTNVCIGHAPAV*
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mRNA from alignment at P-wetherbeei_contig5635:1815..3579+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5635.1.1 ID=mRNA_P-wetherbeei_contig5635.1.1|Name=mRNA_P-wetherbeei_contig5635.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1765bp|location=Sequence derived from alignment at P-wetherbeei_contig5635:1815..3579+ (Phaeothamnion wetherbeei SAG_119_79)
TGCTACGGGAAAAAGGACGGGATGAAGAAGAGATAGAGAGAGGCCTGCAA
GAAGGCTATGGCCGTCTTCTCACGACTCCTCACCCAAGCATTCTTGGAAA
CGAAAAGCTTGGTCTAACGCGCATCCACCGGAAAAGATGGACGATCCGCC
GCCTTCGTTACGACAGGGCCTCAGCGGGGACCGGGCCATCGTTCTTGCAT
TACTTCTCGGGGCCGCCTCCATCACCTACTGGTACTGGAGCAACCGCTTC
TATTACAAGGAGCAAGCGAGGGCGGAAAGTGTCCTCCTCAGGCTTCAGGC
GAGGCAGGGCAGCGCTAGCAACACGGAAAGCTTGCACTCTGGCCCGGACA
ACGGAACGCGCAGCAACCTGTCGCTAGAAGGTGCAGCTGTTACGTCTCAG
AAGGCAATCAGCCTGCCCGCAGACCCGTGCGCCTATTTAGTTGAACTCCG
CGACCATGCCGCTATTGCTGCCTCGGCGGCGACCGCGGCGGACTGGCGAC
CAGAAATTCTGCCACTTAAAACTGTGGAAGATATTATGGGGTACAGCGGA
CCACCCGGTGAGCTGGCAGCTGCTCCGGGCACCTTGCGCCTTTACCCCTG
GGGTTGCTGACGCTCTGCCTACATCTTTCCCTCCCTCATTCTCGGTCTGC
ATCTATCGCGCAGAGTCGGCGAAGTTTGCGCGGCGCATGCCTTTTGTGGC
CCCGCCGCTGCTGCCGCACCGCCCAAAGCTGCTCGTCTGCCACGATATGG
CGGGCGGCTATGTCGAGGACCGCTGGGTGCAGGGCGGCGACTATGATATG
GCCTACAGGTGAAACTGACTTGATCGTGAATGTTCTCGGAGGATGCGGAT
GTATGTGTGCCTTTACTGAGAACCGAAAGATAGCGGCCAGGCTCCACAAG
GTTGTGCGTGTTTGGTAAGGAGGCCACAGAGTTACTTTAAGAAGCTATCA
ACTCCTCTGAAAAGTAACACTGAGTAACGAATCCATTCTTCATTATCTCT
CTCTCTCCAATGACGGTCTTACCGTCATGCCCTTGCTGACCGGTGGCGTG
GCCGACGCGCCGCTGTCATGCTTGCCGCTGTCCCGGTCGCCGCTCGCCCG
CCGCCTGCCACAGGCTGTACGACTGGGGCATGGTCGACACCTTCGTCTAC
TTTTCCCACAACCTCGTGACGGCCCCGCCCGTCGGCTGGTGCAACGTGGC
GCACCGCCATGGCACTCGCGTCCTCGGCACCTTCATCACCGAGTGGGAGG
CCGGCGCCGCCGTCTGCGCCCGCCTCTTCGCGACGGTAGCCGGGGCGGAG
GACCTGGCGCGGCGGCTGGCGGCCGTCGCGCGCGACTACGGCTTTGACGG
GTGGCTCGTCAACATCGAAAACCCGCTGGAGCCGCTTGAGGAAGGCGAAG
CAAGGAGCGGCGGCGGCAGCGGCGGCGGCGGCGGGGGCAGCAGCAGTGGC
GGCGGTAATGGCGGCGGCAGTGGCGGCGGTAACAGTGTTTGTACCAAGGA
TGGCGGCGAAAGCGGCGATGCGGGCGATCCCGCGCCCGTGCTGGGGCGGG
TGGACGTCATGCTGCATTTCTTGAAGGCGCTCACGCGGGAGATGCGCGCG
TCAACGAATTCTGGCGCTGCGCCGCGGGTAATTTGGTACGATAGCGTCAC
CGTCGGAGGCGATCTCTGCTGGCAGAACTGCCTCAATGCCAACAACAAGG
CATTCTTCGACTGCTGCGACGGGATCTTCACTAATGTGTGTATTGGCCAT
GCGCCCGCTGTATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5635:1815..3579+

>mRNA_P-wetherbeei_contig5635.1.1 ID=mRNA_P-wetherbeei_contig5635.1.1|Name=mRNA_P-wetherbeei_contig5635.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1113bp|location=Sequence derived from alignment at P-wetherbeei_contig5635:1815..3579+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGACGATCCGCCGCCTTCGTTACGACAGGGCCTCAGCGGGGACCGGGC
CATCGTTCTTGCATTACTTCTCGGGGCCGCCTCCATCACCTACTGGTACT
GGAGCAACCGCTTCTATTACAAGGAGCAAGCGAGGGCGGAAAGTGTCCTC
CTCAGGCTTCAGGCGAGGCAGGGCAGCGCTAGCAACACGGAAAGCTTGCA
CTCTGGCCCGGACAACGGAACGCGCAGCAACCTGTCGCTAGAAGGTGCAG
CTGTTACGTCTCAGAAGGCAATCAGCCTGCCCGCAGACCCGTGCGCCTAT
TTAGTTGAACTCCGCGACCATGCCGCTATTGCTGCCTCGGCGGCGACCGC
GGCGGACTGGCGACCAGAAATTCTGCCACTTAAAACTGTGGAAGATATTA
TGGGGTACAGCGGACCACCCGAGTCGGCGAAGTTTGCGCGGCGCATGCCT
TTTGTGGCCCCGCCGCTGCTGCCGCACCGCCCAAAGCTGCTCGTCTGCCA
CGATATGGCGGGCGGCTATGTCGAGGACCGCTGGGTGCAGGGCGGCGACT
ATGATATGGCCTACAGGCTGTACGACTGGGGCATGGTCGACACCTTCGTC
TACTTTTCCCACAACCTCGTGACGGCCCCGCCCGTCGGCTGGTGCAACGT
GGCGCACCGCCATGGCACTCGCGTCCTCGGCACCTTCATCACCGAGTGGG
AGGCCGGCGCCGCCGTCTGCGCCCGCCTCTTCGCGACGGTAGCCGGGGCG
GAGGACCTGGCGCGGCGGCTGGCGGCCGTCGCGCGCGACTACGGCTTTGA
CGGGTGGCTCGTCAACATCGAAAACCCGCTGGAGCCGCTTGAGGAAGGCG
AAGCAAGGAGCGGCGGCGGCAGCGGCGGCGGCGGCGGGGGCAGCAGCAGT
GGCGGCGGTAATGGCGGCGGCAGTGGCGGCGGTAACAGTATGCGCGCGTC
AACGAATTCTGGCGCTGCGCCGCGGGTAATTTGGTACGATAGCGTCACCG
TCGGAGGCGATCTCTGCTGGCAGAACTGCCTCAATGCCAACAACAAGGCA
TTCTTCGACTGCTGCGACGGGATCTTCACTAATGTGTGTATTGGCCATGC
GCCCGCTGTATGA
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