mRNA_P-wetherbeei_contig563.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig563.5.1
Unique NamemRNA_P-wetherbeei_contig563.5.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig563.5.1 vs. uniprot
Match: D7FTM4_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTM4_ECTSI)

HSP 1 Score: 204 bits (520), Expect = 2.320e-56
Identity = 119/284 (41.90%), Postives = 166/284 (58.45%), Query Frame = 2
Query:  248 FMDGEISVRKFRPRELLIGEVIGRGASSVVRLGEIGGARGASLADVHSARRLAVKTFEAPLKAEARSQIYAECQALAKASSPCIVRLEGAFASVDGSVSLVLELMDRGSLEQLIHGAQAPAALRHNAVAAPPLGESFMAAVAFQVLWGMAYLHYERRLHRDIKPANILINSFGEVKLADLGVSRELAPAASMAHTMAGTIRFMAPERLAGGGYGAAADVWSMGVVLLEMASRRKPFNGVQTVMDLHDLLLSPGAIDAALRHCGERSAEFREVVRACLEVDPARR 1099
            F++G  +V +    +L +   +GRGA SVV+  +           V +    A+K F    K + RSQ+  E + L+    P ++ L       DGS+ +VLE MDRGSL  +IHG +               GE  MAA+  Q+LWG+ YLHYE  +HRD+KP N+L+NS GEVKL+D G++REL     +A TM GTIR+M+PERLAG GYG AADVWS+GV+LLEMA+RR PF    + ++LHD L    A+D  ++     S +F +V+R CL+  P  R
Sbjct:   60 FIEGT-NVSEIHQDDLRVLRELGRGACSVVKQAQ----------HVETRELYAIKVFSVFDK-DKRSQLLKEVETLSSMECPSLINL-------DGSIHVVLEYMDRGSLSDVIHGWRGM-----------DYGEDLMAAITLQILWGLGYLHYEHHVHRDVKPQNVLLNSHGEVKLSDFGIARELQGEMDLAQTMVGTIRYMSPERLAGDGYGVAADVWSLGVLLLEMAARRLPFESAVSQIELHDRLQQDLAVDDLIKLVPGHSPQFEQVLRGCLQPIPEER 313          
BLAST of mRNA_P-wetherbeei_contig563.5.1 vs. uniprot
Match: A0A7S2UX05_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX05_9STRA)

HSP 1 Score: 173 bits (438), Expect = 8.610e-46
Identity = 116/332 (34.94%), Postives = 171/332 (51.51%), Query Frame = 2
Query:  254 DGEISVRKFRPRELLIGEVIGRGASSVVRLGEIGGARGASLADVHSARRLAVKTFEAPLKAEARSQIYAECQALAKASSPCIVRLEGAFASVDGSVSLVLELMDRGSLEQLIHGAQAPAALRHNAVAAPPLGESFMAAVAFQVLWGMAYLHYERRLHRDIKPANILINSFGEVKLADLGVSRELAPAASMAHTMAGTIRFMAPERLAGGGYGAAADVWSMGVVLLEMASRRKPFNGVQTVMDLHDLLLSPGAIDAALRHCGER-SAEFREVVRACLEVDPARRPMTLEDSSSGGXXXXXXPGCIFDMPWFANR-ITRVDLAVDIVRRQLEHH 1243
            DG++ +      +L    +IG+GA S V+L          +  V      AVK F      E R Q+  E   L +     ++   GA+      + +VLE MDRGSL  +I                  L E +MAAV +Q+LWG+ YLHYERRLHRDIKP+NIL+N  G+VKL D G++RE+   + MA TM GT ++M+PERL G  Y ++ D+WS+G+VL+EM ++R PF  V   +D+   LL     D  L   GE  S+E  E ++ACL+ +PA R  T +               +F +PW     I  +D A+ +    ++++
Sbjct:   41 DGQLVIDGVHQDDLRPDRIIGQGACSTVQL----------MRHVRDGTLYAVKRFNF-YDREKRKQLMQEINTLHQMDCQALIEFHGAYTK-SSHIYVVLEYMDRGSLTDVIQDYDR-------------LDERYMAAVTYQILWGLGYLHYERRLHRDIKPSNILVNQEGKVKLTDFGIAREVDEDSKMATTMIGTYKYMSPERLKGDAYDSSGDIWSLGIVLIEMVTQRTPFPNVDNQLDMAQELLEMKNED--LIPTGEGCSSELCEFIQACLQRNPADRLSTEQ---------------LFKLPWLDEHGIDDLDKAISVYSEWMDNN 330          
BLAST of mRNA_P-wetherbeei_contig563.5.1 vs. uniprot
Match: A0A835YV97_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV97_9STRA)

HSP 1 Score: 174 bits (441), Expect = 1.930e-45
Identity = 115/276 (41.67%), Postives = 159/276 (57.61%), Query Frame = 2
Query:  404 AVKTFEAPLKAEARSQIYAECQALAKASSPCIVRLEGAFASVDGSVSLVLELMDRGSLEQLIHGAQAPAALRHNAVAAPPLGESFMAAVAFQVLWGMAYLHYERRLHRDIKPANILINSFGEVKLADLGVSRELAPAASMAHTMAGTIRFMAPERLAGGGYGAAADVWSMGVVLLEMASRRKPFNGVQTVMDLHDLLLSPGAIDAALRHCGERSAEFREVVRACLEVDP-ARRPMTLEDSSSGGXXXXXXPGCIFDMPWFANR-ITRVDLAVDIVR 1225
            AVK F    K E   Q+  E      A+ PC+VR  GAF S  G V +VLE MD G L  ++   +             P+ E+ +AA+ +QVLWG++YLHYER+LHRDIKP+NIL+N  GEV+L D G++ +L   A +A T+ GT R+M+PERL G  YGAAADVWS+G+V+LE+A+ + PF+     +DL+ LL     ++  +   G+RS    EV+ ACL  +P  R PM +                +FD P FA   I  +D AVDI+R
Sbjct:   68 AVKVFNTYDK-EKEQQLLRELITFESAACPCLVRFHGAFRSA-GKVHMVLEHMDLGGLHDVLQLTEK----------CGPMPENVIAAIFYQVLWGLSYLHYERKLHRDIKPSNILMNRKGEVRLTDFGIATDLKEDA-LASTVVGTFRYMSPERLRGDEYGAAADVWSLGLVILELATGQVPFSTCNNQLDLNQLL-EEVKVEIFIPW-GQRSESLCEVLSACLHTEPNLRLPMAV----------------LFDSPLFAETGIFSLDEAVDILR 312          
BLAST of mRNA_P-wetherbeei_contig563.5.1 vs. uniprot
Match: A0A7S3UWL4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWL4_HETAK)

HSP 1 Score: 162 bits (410), Expect = 1.750e-42
Identity = 105/276 (38.04%), Postives = 148/276 (53.62%), Query Frame = 2
Query:  437 EARSQIYAECQALAKASSPCIVRLEGAFASVDGSVSLVLELMDRGSLEQLIHGAQAPAALRHNAVAAPPLGESFMAAVAFQVLWGMAYLHYERRLHRDIKPANILINSFGEVKLADLGVSRELAPAASMAHTMAGTIRFMAPERLAGGGYGAAADVWSMGVVLLEMASRRKPFNGVQTVMDLHDLLLSPGAIDAALRHCGERSAEFREVVRACLEVDPARRPMTLEDSSSGGXXXXXXPGCIFDMPWFAN-RITRVDLAVDIVRRQLEHHVRPGGS 1261
            E R Q+  E   L + S P ++   GA+    G++ ++LE MDRGSL  LI+                 + E  +AA+ +Q+LWG+ YLHYE+RLHRDIKP+NIL N+ GE+KL D G++REL  + +MA T+ GT R+M+P RL G  YG  +D+WS+GV+L+E A+R  PF    T ++L   L     ID  L    + S EF E+VR CL   P  RP   +               + + PW     +  +D AV + R  LE H    GS
Sbjct:   18 ETRKQLVQEINTLYEVSCPSLIGFFGAYQK-KGNIYVILENMDRGSLNDLIYNYD-------------DMPEKVLAAITYQILWGLGYLHYEKRLHRDIKPSNILANNSGEIKLTDFGIARELDDS-NMASTIVGTFRYMSPGRLRGDPYGPPSDIWSLGVMLIECAARSLPFPSSNTQIELAQAL-EELEIDEMLPP--DFSDEFCEMVRLCLAPAPEDRPRAEQ---------------LLEGPWLEKFGVADLDEAVAVTRTWLEDHPLAEGS 260          
BLAST of mRNA_P-wetherbeei_contig563.5.1 vs. uniprot
Match: A0A6V1SQ10_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SQ10_HETAK)

HSP 1 Score: 157 bits (398), Expect = 2.310e-40
Identity = 112/304 (36.84%), Postives = 163/304 (53.62%), Query Frame = 2
Query:  197 DGVVVIRD-LCITPLGASFMDGEISVRKFRPRELLIGEVIGRGASSVVRLGEIGGARGASLADVH--SARRLAVKTFEAPLKAEARSQIYAECQALAKASSPCIVRLEGAFASVDGSVSLVLELMDRGSLEQLIHGAQAPAALRHNAVAAPPLGESFMAAVAFQVLWGMAYLHYERRLHRDIKPANILINSFGEVKLADLGVSRELAPAASMAHTMAGTIRFMAPERLAGGGYGAAADVWSMGVVLLEMASRRKPFNGVQTVMDLHDLLLSPGAIDAALRHCGERSAEFREVVRACLEVDPARR 1099
            D  + I+D + I   G S  D   S       EL +GEVIG GASSVV            L  VH  +   LA+K      K++ R+Q+  E   L  A  P ++   GAF   +GS+++ LE M+ GSL  ++                 P+ ES +A + +Q+LWG+AYL +E+RLHRD+KP N+LINS GEVKL D GVSREL  +  +A T  GT R+M+PER+    Y  AADVW++G+ L+E A+   P+   +T + + + +++    D  +   G  S+EF E +  CL+ D   R
Sbjct:   26 DSDLFIKDNIAIDSKGVSMRDSPKSFTVVY-EELQLGEVIGSGASSVV------------LQAVHLPTGTPLALKVINMFDKSK-RNQLIQEICTLYNADCPSLITFYGAFYR-EGSITIALEYMNGGSLANVLKQVG-------------PVPESALANMTYQILWGLAYLKHEKRLHRDLKPGNLLINSKGEVKLTDFGVSRELQSSIELAGTFVGTFRYMSPERIRSRPYNYAADVWALGLCLIEAATGEYPYEDERTAIGMVETIVNS---DIPIPDDGRFSSEFCEFLEQCLQKDSQDR 298          
BLAST of mRNA_P-wetherbeei_contig563.5.1 vs. uniprot
Match: A0A7S1CE06_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CE06_9STRA)

HSP 1 Score: 155 bits (391), Expect = 4.330e-39
Identity = 110/294 (37.41%), Postives = 160/294 (54.42%), Query Frame = 2
Query:  218 DLCITPLGASFMDGEISVRKFRPRELLIGEVIGRGASSVVRLGEIGGARGASLADVHSARRLAVKTFEAPLKAEARSQIYAECQALAKASSPCIVRLEGAFASVDGSVSLVLELMDRGSLEQLIHGAQAPAALRHNAVAAPPLGESFMAAVAFQVLWGMAYLHYERRLHRDIKPANILINSFGEVKLADLGVSRELAPAASMAHTMAGTIRFMAPERLAGGGYGAAADVWSMGVVLLEMASRRKPFNGVQTVMDLHDLLLSPGAIDAALRHCGERSAEFREVVRACLEVDPARR 1099
            D+ +TP G S    E +       +L +   IGRGASSVV+              V +  + AVK      K++ R Q+  E QAL  +    +V+  GA    +G V++ LE MD G L+ +I         +H     PP  E  +A +AFQVLWG+AYL +E R+HRDIKP NIL+NS GEVKL D G+S++L  A+ M  T  G+ ++M+PER+A  GY  ++DVWS+G+VLLE A+   P+     ++D  +++      DA     G+ + EF E +  C+  DPA R
Sbjct:   37 DMKVTPEGVSMDSREATFDGIPYEQLEVLHDIGRGASSVVKHAR----------HVATGEQYAVKCISLWDKSK-RDQLIREIQALYSSDCAALVQFYGATFR-EGMVAVTLEYMDLGGLDNVI---------KH--FGPPP--EKTLACMAFQVLWGLAYLKHEHRVHRDIKPQNILVNSLGEVKLTDFGISKDLQ-ASIMCKTFVGSFKYMSPERMAHTGYDYSSDVWSLGIVLLECATGVYPYAESDAIIDYVNIVTEG---DAPKPPEGKFTPEFSEFIGQCVHKDPAER 301          
BLAST of mRNA_P-wetherbeei_contig563.5.1 vs. uniprot
Match: A0A7S1Z3W8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z3W8_9STRA)

HSP 1 Score: 153 bits (386), Expect = 1.700e-38
Identity = 106/322 (32.92%), Postives = 174/322 (54.04%), Query Frame = 2
Query:  218 DLCITPLGASFMDGEISVRKFRPR-------------ELLIGEVIGRGASSVVRLGE--IGGARGASLADVHSAR--RLAVKTFEAPLKAEARSQIYAECQALAKASSPCIVRLEGAFASVD-GSVSLVLELMDRGSLEQLIHGAQAPAALRHNAVAAPP----------LGESFMAAVAFQVLWGMAYLHYERRLHRDIKPANILINSFGEVKLADLGVSRELAPAASMAHTMAGTIRFMAPERLAGGGYGAAADVWSMGVVLLEMASRRKPFNGVQTVMDLHDLLLSPGAIDAALRHCGERSAEFREVVRACLEVDPARR 1099
            DL ++P+G ++    +S+ +   R             +L + E IGRGA S+V+  +  +GG   A++    ++R   +A+K F      + R  +  E ++L      C+V L GAF   D G+V+LVLE MDRGSL  L+       +   N ++             L E   A++A+Q+LWG+ YLH+E  +HRD+KP N+L+N+ GEVKL+D G++ +      M  T+ GT R+M+PERL    YG+++D+WS+G+VLLE  + + PF  V + ++L  L +   + D  +      S    E++++CL+  P RR
Sbjct:    3 DLGLSPMGTTYRAEGLSIGRDYMRFEGMTMSSQLSRSDLEVEETIGRGACSIVKKAKLAVGGNVKANIPKGETSRPTHMALKMFPIRRDKKRREMLLKELRSLCSLECDCLVTLIGAFFDDDEGTVTLVLEYMDRGSLGSLLGSDPGTNSSTSNHLSLISHVESNLGRNGLPEKATASIAYQMLWGLGYLHHENMIHRDVKPGNVLVNTRGEVKLSDFGIASQREVGQEMNVTVVGTTRYMSPERLRAKPYGSSSDLWSLGLVLLECCTGKSPFEDVTSQVELL-LTVEETSADEWIP-VDTLSPGLVEILKSCLQQSPERR 322          
BLAST of mRNA_P-wetherbeei_contig563.5.1 vs. uniprot
Match: A0A835Z5L4_9STRA (Mitogen-activated protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5L4_9STRA)

HSP 1 Score: 147 bits (370), Expect = 1.850e-38
Identity = 85/164 (51.83%), Postives = 104/164 (63.41%), Query Frame = 2
Query:  437 EARSQIYAECQALAKASSPCIVRLEGAFASVDGSVSLVLELMDRGSLEQLIHGAQAPAALRHNAVAAPPLGESFMAAVAFQVLWGMAYLHYERRLHRDIKPANILINSFGEVKLADLGVSRELAPAASMAHTMAGTIRFMAPERLAGGGYGAAADVWSMGVVLL 928
            E R Q+  E + L       ++ L GA+   DG + +VLE MD G L  +IH      A  H A       E  MAA A QVLWG+AYLH+ERRLHRDIKP NIL++S GEVKL D G+SR L   + MA TM GTIR+M+PERLAG  YGA  D+WS+GV+LL
Sbjct:    4 EKRKQLLDELKMLHGLDCSNLIELHGAYYR-DGCIHVVLEFMDMGCLGDMIH------AWGHVAY-----DEQVMAAAALQVLWGLAYLHFERRLHRDIKPQNILLSSLGEVKLGDFGISRHLEEESEMAATMVGTIRYMSPERLAGEAYGAPGDIWSLGVLLL 155          
BLAST of mRNA_P-wetherbeei_contig563.5.1 vs. uniprot
Match: A0A836C7K8_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7K8_9STRA)

HSP 1 Score: 154 bits (390), Expect = 2.950e-37
Identity = 127/367 (34.60%), Postives = 176/367 (47.96%), Query Frame = 2
Query:  290 ELLIGEVIGRGASSVVRLGEIGGARGASLADVHSARRLAVKTFEAPLKAEARSQIYAECQALAKASSPCIVRLEGAFASVDGS--------------------------------------VSLVLELMDRGSLEQLIHGAQAPAALRHNAVAAPPLGESFMAAVAFQVLWGMAYLHYERRLHRDIKPANILINSFGEVKLADLGVSRELAPAASMAHTMAGTIRFMAPERLAGGGYGAAADVWSMGVVLLEMASRRK------------PFNGVQTVMDLHDLLLSPGAIDAALRHCGERSAEFREVVRACLEVDPARR-PMTLEDSSSGGXXXXXXPGCIFDMPWFAN-RITRVDLAVDIVRRQL 1234
            +L  G V+G+GA S V       AR     D++     AVK F  P   E   Q+  E   L   + PC+VR  G F S DG                                       V +VLE MD GSL  +I+G                + ES +AA+ +QVLWG+ YLH+ERRLHRDIKP+NIL+N  GEV+L D G++ EL     +A TM GT R+M+PERL G  YGAAADVW +G+V+LE+A+++K            PF      +DL+ LL        +     +RS+   E +R+CL  DP RR P+ +                +FD P F++  I+ +D+A +I+R  L
Sbjct:   38 DLDFGRVLGKGACSYVLE-----ARHKRSNDLY-----AVKVFN-PYDREKEKQLMRELSMLEMVTCPCLVRFYGVFRS-DGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHVVLEHMDAGSLHDVIYGF----------TGGDLVPESVIAAIFYQVLWGLGYLHFERRLHRDIKPSNILLNRKGEVRLTDFGIATELQ-GDELASTMVGTFRYMSPERLRGDEYGAAADVWGLGLVILELATQQKLWSTSTSTYDSAPFVNCSNQIDLNQLLEEVRM--ESFIPSRQRSSALCEALRSCLHADPQRRVPVPV----------------LFDSPLFSDFGISDLDVATEILRTWL 363          
BLAST of mRNA_P-wetherbeei_contig563.5.1 vs. uniprot
Match: A0A7S0SXD7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SXD7_9STRA)

HSP 1 Score: 147 bits (372), Expect = 5.820e-37
Identity = 93/272 (34.19%), Postives = 149/272 (54.78%), Query Frame = 2
Query:  290 ELLIGEVIGRGASSVVRLGEIGGARGASLADVHS--ARRLAVKTFEAPLKAEARSQIYAECQALAKASSPCIVRLEGAFASVDGSVSLVLELMDRGSLEQLIHGAQAPAALRHNAVAAPPLGESFMAAVAFQVLWGMAYLHYERRLHRDIKPANILINSFGEVKLADLGVSRELAPAASMAHTMAGTIRFMAPERLAGGGYGAAADVWSMGVVLLEMASRRKPFNGVQTVMDLHDLLLSPGAIDAALRHCGERSAEFREVVRACLEVDPARR 1099
            EL +GE+IGRG SS+V  G            +HS     LA+K      +++ R Q+  E   L  A  P ++   GAF   +G++++ LE MD GSL  ++                 P+ E  +A ++FQ+LWG+AY+ +++R+HRD+KP+N+LINS GEVK++D GVS EL  + +M  T  GT ++M+PER+    Y  A+D+WS G+V++E A+   P+      +++   +L     D         S E +E ++  L+ DP+RR
Sbjct:   56 ELELGEIIGRGCSSIVIYG------------IHSPTGTPLALKVINLFDRSK-RDQLIREIATLYDAQCPNLITFYGAFYR-EGAITIALEYMDGGSLANVLDQVG-------------PIPERALAGISFQILWGLAYMKHDKRVHRDVKPSNLLINSKGEVKVSDFGVSAELQTSIAMCGTFVGTFKYMSPERIRNQPYSYASDIWSFGLVVMECATGNYPYVECSNCIEMAQTILETDIPDLPPNRY---SLELKEFLKQILQRDPSRR 297          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig563.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTM4_ECTSI2.320e-5641.90Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A7S2UX05_9STRA8.610e-4634.94Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835YV97_9STRA1.930e-4541.67Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A7S3UWL4_HETAK1.750e-4238.04Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6V1SQ10_HETAK2.310e-4036.84Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1CE06_9STRA4.330e-3937.41Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S1Z3W8_9STRA1.700e-3832.92Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A835Z5L4_9STRA1.850e-3851.83Mitogen-activated protein kinase n=1 Tax=Tribonema... [more]
A0A836C7K8_9STRA2.950e-3734.60Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A7S0SXD7_9STRA5.820e-3734.19Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig563contigP-wetherbeei_contig563:7166..9263 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FTM4
PFAMsPkinase
Model size1490
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue7.96e-58
EggNOG OGsKOG0581@1|root,KOG0581@2759|Eukaryota
DescriptionMAP kinase kinase activity
Cds size1302
COG categoryG
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig563.5.1prot_P-wetherbeei_contig563.5.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig563 7248..9157 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186837.5639474-UTR-P-wetherbeei_contig563:7165..72471683186837.5639474-UTR-P-wetherbeei_contig563:7165..7247Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig563 7166..7247 -
1683186837.6154783-UTR-P-wetherbeei_contig563:9157..92631683186837.6154783-UTR-P-wetherbeei_contig563:9157..9263Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig563 9158..9263 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186837.5771487-CDS-P-wetherbeei_contig563:7247..74481683186837.5771487-CDS-P-wetherbeei_contig563:7247..7448Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig563 7248..7448 -
1683186837.5878897-CDS-P-wetherbeei_contig563:7576..80141683186837.5878897-CDS-P-wetherbeei_contig563:7576..8014Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig563 7577..8014 -
1683186837.5995176-CDS-P-wetherbeei_contig563:8326..85841683186837.5995176-CDS-P-wetherbeei_contig563:8326..8584Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig563 8327..8584 -
1683186837.6073475-CDS-P-wetherbeei_contig563:8752..91571683186837.6073475-CDS-P-wetherbeei_contig563:8752..9157Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig563 8753..9157 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig563.5.1

>prot_P-wetherbeei_contig563.5.1 ID=prot_P-wetherbeei_contig563.5.1|Name=mRNA_P-wetherbeei_contig563.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=434bp
MEASTRRSLWRSPRSASTRGMSVPTAPSQEDGVVVIRDLCITPLGASFMD
GEISVRKFRPRELLIGEVIGRGASSVVRLGEIGGARGASLADVHSARRLA
VKTFEAPLKAEARSQIYAECQALAKASSPCIVRLEGAFASVDGSVSLVLE
LMDRGSLEQLIHGAQAPAALRHNAVAAPPLGESFMAAVAFQVLWGMAYLH
YERRLHRDIKPANILINSFGEVKLADLGVSRELAPAASMAHTMAGTIRFM
APERLAGGGYGAAADVWSMGVVLLEMASRRKPFNGVQTVMDLHDLLLSPG
AIDAALRHCGERSAEFREVVRACLEVDPARRPMTLEDSSSGGSGGSGGPG
CIFDMPWFANRITRVDLAVDIVRRQLEHHVRPGGSPILSRSNHAVRTGRN
HRPFEDSGVNGGSSGESGGGSFRRRQHGTAEAA*
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mRNA from alignment at P-wetherbeei_contig563:7166..9263-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig563.5.1 ID=mRNA_P-wetherbeei_contig563.5.1|Name=mRNA_P-wetherbeei_contig563.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2098bp|location=Sequence derived from alignment at P-wetherbeei_contig563:7166..9263- (Phaeothamnion wetherbeei SAG_119_79)
AAAGAAAGTGCCAAGCGTGTATACGGCGAGAATCCGCGGAAGAAAGAAGA ATCTTCTCTACTCCATCGCCTTTCCCCACAGAAGCACACGGCCAGACTTC GTAAAAATGGAAGCTTCCACGAGGCGATCTCTGTGGAGAAGCCCCAGGAG CGCGAGCACGAGAGGGATGAGTGTGCCTACGGCTCCGTCACAGGAAGACG GAGTGGTCGTGATCCGTGACCTGTGCATCACTCCACTCGGCGCGAGCTTT ATGGATGGCGAAATCTCCGTCCGAAAGTTTCGCCCGCGCGAGCTTTTGAT CGGTGAAGTAATCGGCCGCGGCGCGAGCTCGGTCGTGCGCTTGGGAGAAA TTGGGGGCGCCCGAGGAGCGTCGCTCGCTGACGTTCACAGCGCACGGCGG CTGGCCGTGAAAACTTTTGAGGCGCCCTTGAAAGCGGAAGCAAGAAGTCA AATCTACGCGGAGTGTCAAGCCCTCGCCAAGGCCTCAAGTCCATGCATCG TTCGCCTCGAGGTGAGCCGAAGAAAGCTAAAGTGGCTACTTACCGGTTTT TGGCATGGCATTCCTCTGAAATTTTCGTGTAGAATTTCACCGGTATTTAA CGCAGCATTAAGCCGCTCTCATTTTCACCATCTCGGCCCTCTCTCTTAAC GCCGCCGACGCTCGAAATCTCTTCTGCAGGGTGCCTTTGCCTCGGTGGAT GGCAGCGTCTCCCTCGTTCTGGAGCTGATGGATCGCGGCTCGCTCGAGCA ACTCATTCACGGCGCTCAGGCGCCGGCGGCACTGCGGCATAACGCCGTCG CTGCGCCGCCGCTGGGGGAGAGCTTCATGGCAGCCGTCGCGTTTCAGGTT CTGTGGGGGATGGCCTACCTGCACTACGAGCGGCGGCTGCACCGCGACAT CAAGCCGGCGAACATCCTGATCAACAGTTTCGGCGAGGTGAGGATAGGAA GGGGAGGGACTTTGGAAGGAGAGAAAACAGGTTCTAGACTTTTGGAAACC CACCCAACACCACTTTTCTACTTGCCAATTGCTTGTGAGCGGCATGGAAA ATAAACGCAACCTAAGAGCTTCACTTGCTTTAGCGCCATACATTCTACAA TCTTCAAGAAGGCGGATTTGCAGGACCTCCTCCGCTGTCCGGGATCCCCG ATCTTGCTCGCAATTCCCCATGAAAACCATGAGGCGAGAACCACCCCTTT CCCTCCGATTCAATAATCGCCATGTCGCTCAAAACACCGACCCAACCAGG TGAAACTGGCGGACCTCGGCGTCTCCCGGGAGTTGGCCCCCGCGGCGAGC ATGGCGCACACCATGGCGGGCACCATCCGCTTCATGGCGCCCGAGCGGCT CGCCGGAGGTGGCTACGGCGCCGCCGCCGACGTCTGGTCCATGGGCGTCG TCCTCCTCGAGATGGCCTCCCGACGCAAGCCCTTCAATGGCGTCCAGACT GTCATGGACCTGCACGACCTGCTGCTCTCGCCTGGCGCCATCGACGCGGC GCTGCGCCATTGCGGCGAGCGGAGCGCCGAGTTCCGCGAGGTGGTGCGGG CGTGCCTGGAGGTGGACCCAGCGCGTCGCCCAATGACGCTGGAGGACAGC AGCTCTGGCGGCTCCGGCGGCTCGGGCGGGCCCGGCTGCATCTTCGACAT GCCGTGGTTTGCCAACCGGATAACGCGGGTCGACCTGGTAAATCACCGCC CTTGGCCTAAACATTCTATGTTTTCTGGGTGATCCACCATGTCAATTTCT CAACTATTCACGCAGTTGAAAGAATCTTACACGCCACCAACCGCATATCC TAAAAACACTCGCAGGCGGTCGACATCGTGCGGCGGCAGCTGGAGCACCA CGTACGCCCGGGGGGCTCCCCCATCCTCAGCCGCAGCAACCACGCTGTGC GTACAGGAAGAAACCACCGGCCTTTCGAGGACTCCGGCGTCAACGGCGGC TCGTCGGGAGAGTCCGGCGGCGGCAGCTTTCGGCGGCGGCAGCACGGGAC CGCCGAGGCGGCATAGATCCGCGTGCCGCCCAAGCCGCCGTTTGCTGCGT GCTGCGCCGATAAAGGGGCTCGGAGCGCAGCGGGCACCCCAGTTTTTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig563:7166..9263-

>mRNA_P-wetherbeei_contig563.5.1 ID=mRNA_P-wetherbeei_contig563.5.1|Name=mRNA_P-wetherbeei_contig563.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1302bp|location=Sequence derived from alignment at P-wetherbeei_contig563:7166..9263- (Phaeothamnion wetherbeei SAG_119_79)
ATGGAAGCTTCCACGAGGCGATCTCTGTGGAGAAGCCCCAGGAGCGCGAG
CACGAGAGGGATGAGTGTGCCTACGGCTCCGTCACAGGAAGACGGAGTGG
TCGTGATCCGTGACCTGTGCATCACTCCACTCGGCGCGAGCTTTATGGAT
GGCGAAATCTCCGTCCGAAAGTTTCGCCCGCGCGAGCTTTTGATCGGTGA
AGTAATCGGCCGCGGCGCGAGCTCGGTCGTGCGCTTGGGAGAAATTGGGG
GCGCCCGAGGAGCGTCGCTCGCTGACGTTCACAGCGCACGGCGGCTGGCC
GTGAAAACTTTTGAGGCGCCCTTGAAAGCGGAAGCAAGAAGTCAAATCTA
CGCGGAGTGTCAAGCCCTCGCCAAGGCCTCAAGTCCATGCATCGTTCGCC
TCGAGGGTGCCTTTGCCTCGGTGGATGGCAGCGTCTCCCTCGTTCTGGAG
CTGATGGATCGCGGCTCGCTCGAGCAACTCATTCACGGCGCTCAGGCGCC
GGCGGCACTGCGGCATAACGCCGTCGCTGCGCCGCCGCTGGGGGAGAGCT
TCATGGCAGCCGTCGCGTTTCAGGTTCTGTGGGGGATGGCCTACCTGCAC
TACGAGCGGCGGCTGCACCGCGACATCAAGCCGGCGAACATCCTGATCAA
CAGTTTCGGCGAGGTGAAACTGGCGGACCTCGGCGTCTCCCGGGAGTTGG
CCCCCGCGGCGAGCATGGCGCACACCATGGCGGGCACCATCCGCTTCATG
GCGCCCGAGCGGCTCGCCGGAGGTGGCTACGGCGCCGCCGCCGACGTCTG
GTCCATGGGCGTCGTCCTCCTCGAGATGGCCTCCCGACGCAAGCCCTTCA
ATGGCGTCCAGACTGTCATGGACCTGCACGACCTGCTGCTCTCGCCTGGC
GCCATCGACGCGGCGCTGCGCCATTGCGGCGAGCGGAGCGCCGAGTTCCG
CGAGGTGGTGCGGGCGTGCCTGGAGGTGGACCCAGCGCGTCGCCCAATGA
CGCTGGAGGACAGCAGCTCTGGCGGCTCCGGCGGCTCGGGCGGGCCCGGC
TGCATCTTCGACATGCCGTGGTTTGCCAACCGGATAACGCGGGTCGACCT
GGCGGTCGACATCGTGCGGCGGCAGCTGGAGCACCACGTACGCCCGGGGG
GCTCCCCCATCCTCAGCCGCAGCAACCACGCTGTGCGTACAGGAAGAAAC
CACCGGCCTTTCGAGGACTCCGGCGTCAACGGCGGCTCGTCGGGAGAGTC
CGGCGGCGGCAGCTTTCGGCGGCGGCAGCACGGGACCGCCGAGGCGGCAT
AG
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