mRNA_P-wetherbeei_contig56167.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig56167.1.1 vs. uniprot
Match: UPI0019BB6980 (C-type cytochrome n=1 Tax=Prolixibacteraceae bacterium TaxID=2053594 RepID=UPI0019BB6980) HSP 1 Score: 187 bits (474), Expect = 3.220e-59 Identity = 85/101 (84.16%), Postives = 94/101 (93.07%), Query Frame = 1
Query: 46 ATMLLLNPALAEEELRNPFAGDAAAAAEGKRLFLKTGCYACHGHEAEGAVGPDLTDDEWIYKPTDAMIFNTIAKGRRGTVMAPFGDQLAPEEIWKIVEFLR 348
A +LL +PA AE+EL+NPFAGD AA EGKRLFLKTGCY+CHGHEAEGAVGPDLTDDEW+YKPTDAMIFNTIAKGRRGTVM+PFGDQL P+EIW+IVEFLR
Sbjct: 15 ALLLLFHPARAEDELKNPFAGDTVAAVEGKRLFLKTGCYSCHGHEAEGAVGPDLTDDEWVYKPTDAMIFNTIAKGRRGTVMSPFGDQLKPDEIWQIVEFLR 115
BLAST of mRNA_P-wetherbeei_contig56167.1.1 vs. uniprot
Match: A0A2E6QLQ5_9PROT (Cytochrome c domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6QLQ5_9PROT) HSP 1 Score: 128 bits (322), Expect = 8.850e-36 Identity = 54/97 (55.67%), Postives = 76/97 (78.35%), Query Frame = 1
Query: 58 LLNPALAEEELRNPFAGDAAAAAEGKRLFLKTGCYACHGHEAEGAVGPDLTDDEWIYKPTDAMIFNTIAKGRRGTVMAPFGDQLAPEEIWKIVEFLR 348
+L+ A A +++ NP+ G+A A AEG+RL+ TGCY+CHG A+GAVGPDLTDDEW+Y+PTDA +F TIAKGR GT M + + L+ +EIWK++ ++R
Sbjct: 41 ILDTATAADDVHNPYTGNAEAIAEGQRLWAATGCYSCHGELADGAVGPDLTDDEWVYRPTDATLFKTIAKGRSGTNMVGWSESLSDDEIWKVIAYIR 137
BLAST of mRNA_P-wetherbeei_contig56167.1.1 vs. uniprot
Match: A0A6N8UV92_9PROT (C-type cytochrome n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6N8UV92_9PROT) HSP 1 Score: 127 bits (320), Expect = 1.330e-35 Identity = 60/105 (57.14%), Postives = 75/105 (71.43%), Query Frame = 1
Query: 34 ASLCATMLLLNPALAEEELRNPFAGDAAAAAEGKRLFLKTGCYACHGHEAEGAVGPDLTDDEWIYKPTDAMIFNTIAKGRRGTVMAPFGDQLAPEEIWKIVEFLR 348
A+L AT A A ++ NPF GD A AEGKRL+ +TGCYACHG EA GAVGPDLTDD+W+Y+PTDA IF IAKGR+GT M + L E+IWK++ ++R
Sbjct: 24 AALAATXXXXXXARAADDA-NPFTGDPDAIAEGKRLWAQTGCYACHGKEAGGAVGPDLTDDQWVYRPTDATIFKAIAKGRKGTNMVGWSSSLTDEQIWKVIAYIR 127
BLAST of mRNA_P-wetherbeei_contig56167.1.1 vs. uniprot
Match: A0A0S8D7P7_9PROT (Cytochrome c domain-containing protein n=1 Tax=Betaproteobacteria bacterium SG8_40 TaxID=1703389 RepID=A0A0S8D7P7_9PROT) HSP 1 Score: 122 bits (307), Expect = 5.950e-34 Identity = 52/86 (60.47%), Postives = 67/86 (77.91%), Query Frame = 1
Query: 91 RNPFAGDAAAAAEGKRLFLKTGCYACHGHEAEGAVGPDLTDDEWIYKPTDAMIFNTIAKGRRGTVMAPFGDQLAPEEIWKIVEFLR 348
+NP+ GD A EG++L+ KTGCY+CHG AEG VGP L DDEWIYKPTD +F TIA+GRRGTVMA + +L P++IWK+V ++R
Sbjct: 17 KNPYTGDETAIKEGRKLWRKTGCYSCHGGVAEGGVGPSLIDDEWIYKPTDKTLFKTIAEGRRGTVMAGWSKELDPDQIWKVVAYIR 102
BLAST of mRNA_P-wetherbeei_contig56167.1.1 vs. uniprot
Match: A0A2E9E500_9PROT (Cytochrome c domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E9E500_9PROT) HSP 1 Score: 111 bits (278), Expect = 3.920e-29 Identity = 56/117 (47.86%), Postives = 73/117 (62.39%), Query Frame = 1
Query: 16 VLRWYAASLCATMLLLNPALAEEEL------RNPFAGDAAAAAEGKRLFLKTGCYACHGHEAEGAVGPDLTDDEWIYKPTDAMIFNTIAKGRRGTVMAPFGDQLAPEEIWKIVEFLR 348
+LR+ A + A + +LAEEE +N GD AA A GK + GCYACHG +AEG VGP L+DD WIYKPTD M++N IA+GR GT M + L P +IW++V F+R
Sbjct: 19 LLRYGVAIVLAVSMAQGLSLAEEEELPENWEKNKLNGDVAAIAAGKAHWKNIGCYACHGRKAEGGVGPSLSDDIWIYKPTDKMVYNAIARGRSGTNMVGWSKDLTPRQIWELVAFIR 135
BLAST of mRNA_P-wetherbeei_contig56167.1.1 vs. uniprot
Match: A0A836U6I2_9PROT (C-type cytochrome n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A836U6I2_9PROT) HSP 1 Score: 104 bits (259), Expect = 2.430e-26 Identity = 44/74 (59.46%), Postives = 56/74 (75.68%), Query Frame = 1
Query: 127 EGKRLFLKTGCYACHGHEAEGAVGPDLTDDEWIYKPTDAMIFNTIAKGRRGTVMAPFGDQLAPEEIWKIVEFLR 348
+GK+L+ KTGCY+CHG AEG VGP L DD W+YKP D M+F TIAKGR GTVM + +L+ EIW+I+ F+R
Sbjct: 55 KGKKLWRKTGCYSCHGGNAEGGVGPSLQDDIWVYKPNDKMLFKTIAKGRSGTVMVAWESELSQTEIWEIIIFIR 128
BLAST of mRNA_P-wetherbeei_contig56167.1.1 vs. uniprot
Match: A0A2E4I9I1_9PROT (Cytochrome c domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A2E4I9I1_9PROT) HSP 1 Score: 104 bits (259), Expect = 2.430e-26 Identity = 45/85 (52.94%), Postives = 58/85 (68.24%), Query Frame = 1
Query: 94 NPFAGDAAAAAEGKRLFLKTGCYACHGHEAEGAVGPDLTDDEWIYKPTDAMIFNTIAKGRRGTVMAPFGDQLAPEEIWKIVEFLR 348
NP G+ A A GK + GCYACHG AEG VGP L+DD W+YKPTD M++N I++GR GT M + L PE+IW++V F+R
Sbjct: 44 NPLNGNPDAIASGKAHWKNIGCYACHGRIAEGGVGPSLSDDIWVYKPTDRMVYNAISRGRSGTNMVGWSKDLTPEQIWELVAFIR 128
BLAST of mRNA_P-wetherbeei_contig56167.1.1 vs. uniprot
Match: UPI001F35EF86 (cytochrome c n=2 Tax=Noviherbaspirillum pedocola TaxID=2801341 RepID=UPI001F35EF86) HSP 1 Score: 80.5 bits (197), Expect = 7.580e-17 Identity = 37/89 (41.57%), Postives = 52/89 (58.43%), Query Frame = 1
Query: 82 EELRNPFAGDAAAAAEGKRLFLKTGCYACHGHEAEGAVGPDLTDDEWIYKPTDAMIFNTIAKGRRGTVMAPFGDQLAPEEIWKIVEFLR 348
+ L+NP+ GD A A+G++LF C CH + GA+GP L+D+EWIY IF TI +GR M F L E +WK+V ++R
Sbjct: 40 QTLKNPYEGDPVAIAQGRQLFTSMNCAGCHAPQGGGAMGPPLSDNEWIYGGEPGQIFMTIMQGRPNG-MPSFASALPEESVWKLVAYVR 127
BLAST of mRNA_P-wetherbeei_contig56167.1.1 vs. uniprot
Match: A0A2R5F3B8_9PROT (Cytochrome C n=1 Tax=Novimethylophilus kurashikiensis TaxID=1825523 RepID=A0A2R5F3B8_9PROT) HSP 1 Score: 77.8 bits (190), Expect = 1.240e-15 Identity = 36/89 (40.45%), Postives = 54/89 (60.67%), Query Frame = 1
Query: 82 EELRNPFAGDAAAAAEGKRLFLKTGCYACHGHEAEGAVGPDLTDDEWIYKPTDAMIFNTIAKGRRGTVMAPFGDQLAPEEIWKIVEFLR 348
++L+NP+ G+A+AAAEG+ LF C CH +A G +GP L D +WIY I+ +I +GR M F L P+ +WK+V ++R
Sbjct: 60 DQLKNPYEGNASAAAEGRSLFNAMNCSGCHAKDAGGGMGPPLGDKDWIYGGEPGQIYLSILQGRPNG-MPSFEKALPPDALWKLVTYIR 147
BLAST of mRNA_P-wetherbeei_contig56167.1.1 vs. uniprot
Match: A0A2V7GA07_9BACT (Cytochrome C n=2 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7GA07_9BACT) HSP 1 Score: 75.1 bits (183), Expect = 4.080e-15 Identity = 33/85 (38.82%), Postives = 49/85 (57.65%), Query Frame = 1
Query: 94 NPFAGDAAAAAEGKRLFLKTGCYACHGHEAEGAVGPDLTDDEWIYKPTDAMIFNTIAKGRRGTVMAPFGDQLAPEEIWKIVEFLR 348
N + G A AEG+ L+LK GC ACHG G +GP LTDD W + +D +++ I M G+QL +E+WK++ ++R
Sbjct: 22 NKYNGKPDAVAEGRALYLKYGCSACHGVGGGGGMGPPLTDDVWKFGSSDEVLYKLIKGQIPEATMPKVGEQLTDDEVWKVIAYIR 106 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56167.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig56167.1.1 >prot_P-wetherbeei_contig56167.1.1 ID=prot_P-wetherbeei_contig56167.1.1|Name=mRNA_P-wetherbeei_contig56167.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=116bp MPIDSVLRWYAASLCATMLLLNPALAEEELRNPFAGDAAAAAEGKRLFLKback to top mRNA from alignment at P-wetherbeei_contig56167:101..448- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig56167.1.1 ID=mRNA_P-wetherbeei_contig56167.1.1|Name=mRNA_P-wetherbeei_contig56167.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=348bp|location=Sequence derived from alignment at P-wetherbeei_contig56167:101..448- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig56167:101..448- >mRNA_P-wetherbeei_contig56167.1.1 ID=mRNA_P-wetherbeei_contig56167.1.1|Name=mRNA_P-wetherbeei_contig56167.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=348bp|location=Sequence derived from alignment at P-wetherbeei_contig56167:101..448- (Phaeothamnion wetherbeei SAG_119_79)back to top |