mRNA_P-wetherbeei_contig56077.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig56077.1.1 vs. uniprot
Match: A0A800JQS9_9CHLR (Pyruvate carboxylase (Fragment) n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A800JQS9_9CHLR) HSP 1 Score: 273 bits (697), Expect = 2.070e-88 Identity = 123/173 (71.10%), Postives = 148/173 (85.55%), Query Frame = 1
Query: 1 DMLAVADAYARLLPQLLSVECWGGATFDVAMRFLHECPWRRLTALRERMPNILTQMLLRASNGVGYKNYADNVVIHFVQQAAQGGVDIFRIFDSLNWVENMRIAIDAVVETGKIAEAAICYTGNLSDPRCTKYDLRYYVKMAKELEAAGAHVLGIKDMAGLCRPQAARALVHA 519
D++ V+DAYA+L P+LLS+ECWGGATFDVAMRFLHECPW+RL A+R +PNI TQMLLR SNGVGYKNYADNVV +FV+QAA GVDIFR+FDSLNWVENMR+++D+V+E GK+ E ICYTGN++D + KY + YY+K+AKELEAAGAH+LGIKDMAGLC P A LV A
Sbjct: 200 DLIQVSDAYAKLAPELLSIECWGGATFDVAMRFLHECPWKRLEAIRRNLPNICTQMLLRGSNGVGYKNYADNVVQYFVKQAASSGVDIFRVFDSLNWVENMRLSMDSVIEAGKVCEGTICYTGNVADSKADKYSINYYLKLAKELEAAGAHILGIKDMAGLCLPNATSLLVGA 372
BLAST of mRNA_P-wetherbeei_contig56077.1.1 vs. uniprot
Match: A0A2D6CQJ0_9GAMM (Pyruvate carboxylase n=4 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2D6CQJ0_9GAMM) HSP 1 Score: 286 bits (732), Expect = 3.200e-87 Identity = 133/173 (76.88%), Postives = 155/173 (89.60%), Query Frame = 1
Query: 1 DMLAVADAYARLLPQLLSVECWGGATFDVAMRFLHECPWRRLTALRERMPNILTQMLLRASNGVGYKNYADNVVIHFVQQAAQGGVDIFRIFDSLNWVENMRIAIDAVVETGKIAEAAICYTGNLSDPRCTKYDLRYYVKMAKELEAAGAHVLGIKDMAGLCRPQAARALVHA 519
D++AVADAYAR+LPQLLSVECWGGATFDVAMRFL+ECPW+RL ALRE MPNILTQMLLRASN VGY NY DNVV +FV QAA GVDIFR+FDSLNW+ENMR+AIDA ETGK+ E AIC+TGNLSDP+C+KY+L YY+ +A++LEAAG+H+LG+KDM GLCRPQAAR L+ A
Sbjct: 557 DLIAVADAYARMLPQLLSVECWGGATFDVAMRFLNECPWQRLEALREGMPNILTQMLLRASNAVGYTNYPDNVVRYFVDQAATAGVDIFRVFDSLNWIENMRVAIDAAGETGKLVEGAICFTGNLSDPQCSKYNLDYYLDLARQLEAAGSHILGLKDMGGLCRPQAARELLSA 729
BLAST of mRNA_P-wetherbeei_contig56077.1.1 vs. uniprot
Match: A0A2S6R8X6_9PROT (2-oxoglutarate carboxylase large subunit (Fragment) n=1 Tax=Alphaproteobacteria bacterium MarineAlpha10_Bin2 TaxID=2013104 RepID=A0A2S6R8X6_9PROT) HSP 1 Score: 274 bits (700), Expect = 5.250e-85 Identity = 129/173 (74.57%), Postives = 150/173 (86.71%), Query Frame = 1
Query: 1 DMLAVADAYARLLPQLLSVECWGGATFDVAMRFLHECPWRRLTALRERMPNILTQMLLRASNGVGYKNYADNVVIHFVQQAAQGGVDIFRIFDSLNWVENMRIAIDAVVETGKIAEAAICYTGNLSDPRCTKYDLRYYVKMAKELEAAGAHVLGIKDMAGLCRPQAARALVHA 519
D+LA A AYA LLP LLSVECWGGATFDVAMRFL E PW+RL+A RE MPN+L QMLLRASNGVGY NY DNVV +FVQQAA GG+D+FRIFDSLNWVENMR+A+DAV+E+GK+ EAAICYTG+++DP TKYDL YY+ MA+ELEAAGAH+L +KDMAGLC+P AA L+ A
Sbjct: 160 DLLAAAPAYAHLLPDLLSVECWGGATFDVAMRFLKEDPWQRLSAFREAMPNLLLQMLLRASNGVGYTNYPDNVVRYFVQQAADGGIDLFRIFDSLNWVENMRVAMDAVIESGKLCEAAICYTGDITDPARTKYDLAYYLTMARELEAAGAHILAVKDMAGLCKPAAATKLITA 332
BLAST of mRNA_P-wetherbeei_contig56077.1.1 vs. uniprot
Match: A0A358MJ54_9RHOB (Pyruvate carboxylase (Fragment) n=2 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A358MJ54_9RHOB) HSP 1 Score: 268 bits (686), Expect = 3.400e-84 Identity = 129/173 (74.57%), Postives = 149/173 (86.13%), Query Frame = 1
Query: 1 DMLAVADAYARLLPQLLSVECWGGATFDVAMRFLHECPWRRLTALRERMPNILTQMLLRASNGVGYKNYADNVVIHFVQQAAQGGVDIFRIFDSLNWVENMRIAIDAVVETGKIAEAAICYTGNLSDPRCTKYDLRYYVKMAKELEAAGAHVLGIKDMAGLCRPQAARALVHA 519
DM+ VA AYA+LLP+L SVECWGGATFDVA RFL ECPW+RL LR MPN+LTQMLLRASNGVGY NY DNVV FV QAA+ GVD+FR+FDSLNWVENMR+A+DAV E+GKI EAAICYTG++ DP+ KYDL+YYV MA++LEAAGAHVLG+KDMAGL +P AA+ALV A
Sbjct: 26 DMIKVAPAYAQLLPELFSVECWGGATFDVAYRFLQECPWQRLRDLRTVMPNVLTQMLLRASNGVGYTNYPDNVVQSFVAQAARTGVDVFRVFDSLNWVENMRVAMDAVGESGKICEAAICYTGDILDPKRAKYDLKYYVSMARDLEAAGAHVLGLKDMAGLLKPAAAQALVKA 198
BLAST of mRNA_P-wetherbeei_contig56077.1.1 vs. uniprot
Match: A0A2E7QKV8_9PROT (Pyruvate carboxylase (Fragment) n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7QKV8_9PROT) HSP 1 Score: 274 bits (701), Expect = 8.230e-84 Identity = 127/173 (73.41%), Postives = 151/173 (87.28%), Query Frame = 1
Query: 1 DMLAVADAYARLLPQLLSVECWGGATFDVAMRFLHECPWRRLTALRERMPNILTQMLLRASNGVGYKNYADNVVIHFVQQAAQGGVDIFRIFDSLNWVENMRIAIDAVVETGKIAEAAICYTGNLSDPRCTKYDLRYYVKMAKELEAAGAHVLGIKDMAGLCRPQAARALVHA 519
D++ +A +YA+L P++ S+ECWGGATFDVAMRFLHECPW RL LR RMPNILTQMLLRASNGVGY NY DNVV FVQQ+A G+D+FRIFDSLNWVENMR+AI+AV+ETGK+ EA+ICYTG++SDP TKYDL+YYV +A+EL+ AGAH+LGIKDMAGLC+P AAR LV A
Sbjct: 563 DIVDIAPSYAQLTPEMFSMECWGGATFDVAMRFLHECPWERLQDLRTRMPNILTQMLLRASNGVGYTNYPDNVVRFFVQQSANAGMDLFRIFDSLNWVENMRVAINAVLETGKLCEASICYTGDISDPSRTKYDLKYYVSLARELKEAGAHILGIKDMAGLCKPNAARVLVKA 735
BLAST of mRNA_P-wetherbeei_contig56077.1.1 vs. uniprot
Match: A0A2S6QZM0_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium MarineAlpha10_Bin1 TaxID=2013103 RepID=A0A2S6QZM0_9PROT) HSP 1 Score: 268 bits (685), Expect = 1.630e-83 Identity = 125/173 (72.25%), Postives = 149/173 (86.13%), Query Frame = 1
Query: 1 DMLAVADAYARLLPQLLSVECWGGATFDVAMRFLHECPWRRLTALRERMPNILTQMLLRASNGVGYKNYADNVVIHFVQQAAQGGVDIFRIFDSLNWVENMRIAIDAVVETGKIAEAAICYTGNLSDPRCTKYDLRYYVKMAKELEAAGAHVLGIKDMAGLCRPQAARALVHA 519
D+LA A AYA LLPQLLSVECWGGATFDVAMRFL E PW+RL RE MPN+L QMLLRASNGVGY NY DNVV +FV+Q+A+ GVD+FR+FDSLNWVENMR+A+DAV+ETGK+ EAAICYTG++SDP +KYDL YY+ MA++LEAAGAH++ +KDMAGLC+P AA L+ A
Sbjct: 284 DLLAAAPAYADLLPQLLSVECWGGATFDVAMRFLKEDPWQRLRDFREAMPNLLLQMLLRASNGVGYTNYPDNVVRYFVKQSAENGVDLFRVFDSLNWVENMRVAMDAVIETGKLCEAAICYTGDISDPARSKYDLNYYLDMARQLEAAGAHIIAVKDMAGLCKPAAATTLIKA 456
BLAST of mRNA_P-wetherbeei_contig56077.1.1 vs. uniprot
Match: A0A381W881_9ZZZZ (Pyruvate carboxylase (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381W881_9ZZZZ) HSP 1 Score: 276 bits (705), Expect = 1.970e-83 Identity = 130/173 (75.14%), Postives = 152/173 (87.86%), Query Frame = 1
Query: 1 DMLAVADAYARLLPQLLSVECWGGATFDVAMRFLHECPWRRLTALRERMPNILTQMLLRASNGVGYKNYADNVVIHFVQQAAQGGVDIFRIFDSLNWVENMRIAIDAVVETGKIAEAAICYTGNLSDPRCTKYDLRYYVKMAKELEAAGAHVLGIKDMAGLCRPQAARALVHA 519
D++ V+DAYARLLP+L SVECWGGATFDVAMRFL+ECPW+RL+ +R+ MPNILTQMLLRASN VGY NY DNVV +FVQQAA +DIFRIFDSLNWVENMR++IDAV E GK+ E AIC+TGNLSDP CTKYDL+YY+ +A++LE+AG H+LGIKDM GLCRPQAAR LV A
Sbjct: 573 DIIRVSDAYARLLPELFSVECWGGATFDVAMRFLNECPWQRLSTIRQGMPNILTQMLLRASNAVGYTNYPDNVVRYFVQQAA-ADIDIFRIFDSLNWVENMRVSIDAVREAGKLVEGAICFTGNLSDPGCTKYDLKYYLDLARQLESAGVHILGIKDMGGLCRPQAARELVTA 744
BLAST of mRNA_P-wetherbeei_contig56077.1.1 vs. uniprot
Match: A0A3M1JP42_9PROT (Pyruvate carboxylase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1JP42_9PROT) HSP 1 Score: 276 bits (705), Expect = 2.120e-83 Identity = 133/173 (76.88%), Postives = 150/173 (86.71%), Query Frame = 1
Query: 1 DMLAVADAYARLLPQLLSVECWGGATFDVAMRFLHECPWRRLTALRERMPNILTQMLLRASNGVGYKNYADNVVIHFVQQAAQGGVDIFRIFDSLNWVENMRIAIDAVVETGKIAEAAICYTGNLSDPRCTKYDLRYYVKMAKELEAAGAHVLGIKDMAGLCRPQAARALVHA 519
DM +A YARLLPQLLSVECWGGATFDVAMRFLHE PW+RL +RE+MPN+LTQMLLRASN VGY NY DNVV FV QAA GVDIFR+FDSLNWV+NMR+A++AV ETGKI EAAICYTG+L+DP +KYDL+YYV MA+ELE AGAHVLGIKDMAGLC+P+AAR LV A
Sbjct: 557 DMERIAPVYARLLPQLLSVECWGGATFDVAMRFLHEDPWQRLANIREKMPNVLTQMLLRASNAVGYTNYPDNVVRAFVHQAANSGVDIFRVFDSLNWVDNMRVAMEAVRETGKICEAAICYTGDLTDPDRSKYDLKYYVTMARELEKAGAHVLGIKDMAGLCKPEAARRLVSA 729
BLAST of mRNA_P-wetherbeei_contig56077.1.1 vs. uniprot
Match: A0A545T7Z2_9PROT (Pyruvate carboxylase n=1 Tax=Denitrobaculum tricleocarpae TaxID=2591009 RepID=A0A545T7Z2_9PROT) HSP 1 Score: 275 bits (704), Expect = 3.330e-83 Identity = 129/173 (74.57%), Postives = 151/173 (87.28%), Query Frame = 1
Query: 1 DMLAVADAYARLLPQLLSVECWGGATFDVAMRFLHECPWRRLTALRERMPNILTQMLLRASNGVGYKNYADNVVIHFVQQAAQGGVDIFRIFDSLNWVENMRIAIDAVVETGKIAEAAICYTGNLSDPRCTKYDLRYYVKMAKELEAAGAHVLGIKDMAGLCRPQAARALVHA 519
DMLA+A+ Y+R LP L S+ECWGGATFDVAMRFL E PW RL ALRER+PNIL QMLLR +NGVGYKNY DNVV FVQQ+A+ GVDIFR+FDSLNWVENMR+A+DAVVETGK+ EAAICYTG+++DP +KYDL+YYV MAKELEAAGAH++ +KDMAGLC+P AAR L+ A
Sbjct: 574 DMLAIAEHYSRSLPNLFSLECWGGATFDVAMRFLKEDPWERLVALRERIPNILFQMLLRGANGVGYKNYPDNVVRFFVQQSAEAGVDIFRVFDSLNWVENMRVAMDAVVETGKVCEAAICYTGDITDPNRSKYDLKYYVDMAKELEAAGAHIIAVKDMAGLCKPAAARMLITA 746
BLAST of mRNA_P-wetherbeei_contig56077.1.1 vs. uniprot
Match: A0A6N9BYK4_9GAMM (Pyruvate carboxylase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6N9BYK4_9GAMM) HSP 1 Score: 271 bits (694), Expect = 1.270e-82 Identity = 128/172 (74.42%), Postives = 149/172 (86.63%), Query Frame = 1
Query: 1 DMLAVADAYARLLPQLLSVECWGGATFDVAMRFLHECPWRRLTALRERMPNILTQMLLRASNGVGYKNYADNVVIHFVQQAAQGGVDIFRIFDSLNWVENMRIAIDAVVETGKIAEAAICYTGNLSDPRCTKYDLRYYVKMAKELEAAGAHVLGIKDMAGLCRPQAARALVH 516
D++AVA YAR LP+L SVECWGGATFDVAMRFL+ECPW L LR MPN+LTQMLLRASNGVGY Y DNVV +FVQQ+A+ G+DIFRIFDSLNWVENMR A+DAV+ETGK+ EAAICYTG+++DP TKYDL+YYV +A+ELEAAGAH+LG+KDMAGLC+P AAR LV
Sbjct: 489 DLIAVAPFYARRLPRLFSVECWGGATFDVAMRFLNECPWASLERLRAAMPNLLTQMLLRASNGVGYTTYPDNVVRYFVQQSAENGIDIFRIFDSLNWVENMRPAMDAVLETGKLCEAAICYTGDITDPGRTKYDLKYYVALARELEAAGAHILGLKDMAGLCKPAAARTLVE 660 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56077.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig56077.1.1 >prot_P-wetherbeei_contig56077.1.1 ID=prot_P-wetherbeei_contig56077.1.1|Name=mRNA_P-wetherbeei_contig56077.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=172bp MLAVADAYARLLPQLLSVECWGGATFDVAMRFLHECPWRRLTALRERMPNback to top mRNA from alignment at P-wetherbeei_contig56077:2..520+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig56077.1.1 ID=mRNA_P-wetherbeei_contig56077.1.1|Name=mRNA_P-wetherbeei_contig56077.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig56077:2..520+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig56077:2..520+ >mRNA_P-wetherbeei_contig56077.1.1 ID=mRNA_P-wetherbeei_contig56077.1.1|Name=mRNA_P-wetherbeei_contig56077.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=516bp|location=Sequence derived from alignment at P-wetherbeei_contig56077:2..520+ (Phaeothamnion wetherbeei SAG_119_79)back to top |