mRNA_P-wetherbeei_contig56055.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig56055.1.1 vs. uniprot
Match: A0A6L5FFA3_9HYPH (Signal recognition particle protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FFA3_9HYPH) HSP 1 Score: 250 bits (639), Expect = 3.610e-78 Identity = 132/173 (76.30%), Postives = 145/173 (83.82%), Query Frame = 1
Query: 1 FHPSRVADRILGMGDIVSLVEKAAQTIDAEKAARTAERMRKGAFDLNDXXXXXXXXXXXXXXXXXXXMLPGVAKMKNQMAAANLDDNLLKRQVAIINSMTPKERRNPDLLKNSRKKRIAAGSGTKAEDINKLLKMHRTMADMMKAMGGGAKRGPMAGLANMMGFGGGMPSPEE 519
F P+R+A RILGMGDIVSLVEKAA TIDAEKA RTAERMRKGAFDL D MLPG+AK+KNQMA ANLDD +LKRQ+AII+SMTPKERRNPDLLK+SRKKRIAAGSGT+AEDINKLLKMHRTM D+MKAMGGG+KRGPMAGLANM+G GGGMPSPE+
Sbjct: 285 FDPARIAGRILGMGDIVSLVEKAAATIDAEKAMRTAERMRKGAFDLTDMREQLAQMQTMGGMAGLMGMLPGIAKLKNQMAGANLDDKVLKRQMAIIDSMTPKERRNPDLLKHSRKKRIAAGSGTRAEDINKLLKMHRTMGDVMKAMGGGSKRGPMAGLANMLGLGGGMPSPEQ 457
BLAST of mRNA_P-wetherbeei_contig56055.1.1 vs. uniprot
Match: A0A363TK83_9BRAD (Signal recognition particle protein n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TK83_9BRAD) HSP 1 Score: 248 bits (633), Expect = 2.110e-77 Identity = 147/173 (84.97%), Postives = 159/173 (91.91%), Query Frame = 1
Query: 1 FHPSRVADRILGMGDIVSLVEKAAQTIDAEKAARTAERMRKGAFDLNDXXXXXXXXXXXXXXXXXXXMLPGVAKMKNQMAAANLDDNLLKRQVAIINSMTPKERRNPDLLKNSRKKRIAAGSGTKAEDINKLLKMHRTMADMMKAMGGGAKRGPMAGLANMMGFGGGMPSPEE 519
FHPSR+ADRILGMGDIVSLVEKAA TIDAEKAAR AERMRKGAFDL D XXXXXXXXXXXXXX M+PG+AKMKNQ+AAANLDD +LKRQ+AII+SMTP ERRNPD+LK SRKKRIAAGSGT+ ED+NKLLKMHRTMAD+MKAMGGG KRGP+AGLANMMG GGGMPSPEE
Sbjct: 285 FHPSRIADRILGMGDIVSLVEKAAATIDAEKAARVAERMRKGAFDLADLRDQXXXXXXXXXXXXXXGMMPGIAKMKNQIAAANLDDRVLKRQMAIIDSMTPGERRNPDVLKASRKKRIAAGSGTRVEDVNKLLKMHRTMADVMKAMGGG-KRGPLAGLANMMGLGGGMPSPEE 456
BLAST of mRNA_P-wetherbeei_contig56055.1.1 vs. uniprot
Match: A0A537N239_9PROT (Signal recognition particle protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537N239_9PROT) HSP 1 Score: 235 bits (600), Expect = 1.850e-75 Identity = 129/173 (74.57%), Postives = 147/173 (84.97%), Query Frame = 1
Query: 1 FHPSRVADRILGMGDIVSLVEKAAQTIDAEKAARTAERMRKGAFDLNDXXXXXXXXXXXXXXXXXXXMLPGVAKMKNQMAAANLDDNLLKRQVAIINSMTPKERRNPDLLKNSRKKRIAAGSGTKAEDINKLLKMHRTMADMMKAMGGGAKRGPMAGLANMMGFGGGMPSPEE 519
FHP+R+ADRILGMGDIV+LVE+AA TIDAEKAAR AERMRKGAFDL D XXXXXX MLPG+AKMKNQ+AAANLD+ +LKRQVAII+SMTPKERR+PDLLK SRKKRIAAGSGTK ED+N++LKMHR M+D+MKAM G KRGPMAGLANM+G G MP+PE+
Sbjct: 31 FHPARIADRILGMGDIVTLVERAAATIDAEKAARVAERMRKGAFDLLDLREQLVSMQGMGXXXXXXGMLPGIAKMKNQLAAANLDERVLKRQVAIIDSMTPKERRHPDLLKASRKKRIAAGSGTKVEDVNRMLKMHRGMSDVMKAMSGAGKRGPMAGLANMLGLGSAMPTPEQ 203
BLAST of mRNA_P-wetherbeei_contig56055.1.1 vs. uniprot
Match: A0A1W6ZNX9_9HYPH (Signal recognition particle protein n=1 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZNX9_9HYPH) HSP 1 Score: 241 bits (616), Expect = 7.740e-75 Identity = 145/173 (83.82%), Postives = 154/173 (89.02%), Query Frame = 1
Query: 1 FHPSRVADRILGMGDIVSLVEKAAQTIDAEKAARTAERMRKGAFDLNDXXXXXXXXXXXXXXXXXXXMLPGVAKMKNQMAAANLDDNLLKRQVAIINSMTPKERRNPDLLKNSRKKRIAAGSGTKAEDINKLLKMHRTMADMMKAMGGGAKRGPMAGLANMMGFGGGMPSPEE 519
F P+R+A RILGMGDIVSLVEKAA IDAEKAARTAERMRKGAFDL D XXXXXXXXXXXX M+PGVAKMKNQ+AAANLDD+LLKRQ AII+SMTPKERRNPD+LK SRKKRIAAGSGTK E+INKLLKMHR MADMMKAMGG AKRGPMAGLAN +GFGGGMPS EE
Sbjct: 285 FDPARIAGRILGMGDIVSLVEKAAANIDAEKAARTAERMRKGAFDLTDLREQLTXXXXXXXXXXXXGMIPGVAKMKNQLAAANLDDSLLKRQCAIIDSMTPKERRNPDILKASRKKRIAAGSGTKVEEINKLLKMHRGMADMMKAMGG-AKRGPMAGLANALGFGGGMPSAEE 456
BLAST of mRNA_P-wetherbeei_contig56055.1.1 vs. uniprot
Match: A0A521VRU3_9HYPH (Signal recognition particle protein n=1 Tax=Xanthobacteraceae bacterium TaxID=2021379 RepID=A0A521VRU3_9HYPH) HSP 1 Score: 237 bits (605), Expect = 4.540e-73 Identity = 142/174 (81.61%), Postives = 155/174 (89.08%), Query Frame = 1
Query: 1 FHPSRVADRILGMGDIVSLVEKAAQTIDAEKAARTAERMRKGAFDLNDXXXXXXXXXXXXXXXXXXXMLPGVAKMKNQMAAANLDDNLLKRQVAIINSMTPKERRNPDLLKNSRKKRIAAGSGTKAEDINKLLKMHRTMADMMKAMGGGA-KRGPMAGLANMMGFGGGMPSPEE 519
FHPSR+A RILGMGD+VSLVEKAA TIDAEKAAR AERMRKGAFDL+D XXXXXXXXXXXXX +PGVAK+KNQ+A+ANLDD LLKRQVAII+SMT ER+NPD+LK SRKKRIA G+G K E+INKLLKMHRTMADMMKAMGG A KRGPMAGLANMMGFGGGMPSPE+
Sbjct: 285 FHPSRIAGRILGMGDVVSLVEKAAATIDAEKAARVAERMRKGAFDLSDLREQLTXXXXXXXXXXXXXXMPGVAKIKNQIASANLDDKLLKRQVAIIDSMTRGERKNPDILKASRKKRIAGGAGVKVEEINKLLKMHRTMADMMKAMGGKAGKRGPMAGLANMMGFGGGMPSPED 458
BLAST of mRNA_P-wetherbeei_contig56055.1.1 vs. uniprot
Match: A0A327K7G1_9HYPH (Signal recognition particle protein n=2 Tax=Rhodoplanes piscinae TaxID=444923 RepID=A0A327K7G1_9HYPH) HSP 1 Score: 236 bits (602), Expect = 2.550e-72 Identity = 125/173 (72.25%), Postives = 142/173 (82.08%), Query Frame = 1
Query: 1 FHPSRVADRILGMGDIVSLVEKAAQTIDAEKAARTAERMRKGAFDLNDXXXXXXXXXXXXXXXXXXXMLPGVAKMKNQMAAANLDDNLLKRQVAIINSMTPKERRNPDLLKNSRKKRIAAGSGTKAEDINKLLKMHRTMADMMKAMGGGAKRGPMAGLANMMGFGGGMPSPEE 519
FHP+R+ADRILGMGDIVSLVEKAA TIDAEKA RTAER+RKG F+L+D MLPG+A+MKNQ+AAAN+DD ++KRQ+AII+SMTPKERR PDLLK SRKKRIAAGSGTK E+IN+LLKMHR MADMMK MG G KRGPMAGLAN +GFGGGMPSP+E
Sbjct: 285 FHPARIADRILGMGDIVSLVEKAAATIDAEKARRTAERLRKGQFNLDDLREQLEQMLKMGGLGGMMSMLPGIARMKNQIAAANVDDRIIKRQIAIIHSMTPKERRTPDLLKASRKKRIAAGSGTKVEEINRLLKMHRQMADMMKQMGSG-KRGPMAGLANALGFGGGMPSPQE 456
BLAST of mRNA_P-wetherbeei_contig56055.1.1 vs. uniprot
Match: A0A537L1T2_9PROT (Signal recognition particle protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537L1T2_9PROT) HSP 1 Score: 234 bits (596), Expect = 8.870e-72 Identity = 141/173 (81.50%), Postives = 152/173 (87.86%), Query Frame = 1
Query: 1 FHPSRVADRILGMGDIVSLVEKAAQTIDAEKAARTAERMRKGAFDLNDXXXXXXXXXXXXXXXXXXXMLPGVAKMKNQMAAANLDDNLLKRQVAIINSMTPKERRNPDLLKNSRKKRIAAGSGTKAEDINKLLKMHRTMADMMKAMGGGAKRGPMAGLANMMGFGGGMPSPEE 519
FHPSR+ADRILGMGDIVSLVEKAA TIDAEKAAR AE+MRKGAFDL D XXXXXXXXXXXXX MLPGVAKMKNQ+A A LD+ +LKRQ+AII+SMTPKERRNPD+LK SRK+RIA GSGT+ EDIN+LLKMHR MADMMKAM KRGPMAGLA MMGFGGGMPSPEE
Sbjct: 285 FHPSRIADRILGMGDIVSLVEKAAATIDAEKAARVAEKMRKGAFDLADLRDQXXXXXXXXXXXXXVGMLPGVAKMKNQIANAGLDEKILKRQMAIIDSMTPKERRNPDVLKASRKRRIAEGSGTRPEDINRLLKMHRGMADMMKAMAS-QKRGPMAGLAQMMGFGGGMPSPEE 456
BLAST of mRNA_P-wetherbeei_contig56055.1.1 vs. uniprot
Match: A0A6N7GRW6_9HYPH (Signal recognition particle protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GRW6_9HYPH) HSP 1 Score: 233 bits (593), Expect = 2.060e-71 Identity = 125/175 (71.43%), Postives = 142/175 (81.14%), Query Frame = 1
Query: 1 FHPSRVADRILGMGDIVSLVEKAAQTIDAEKAARTAERMRKGAFDLNDXXXXXXXXXXXXXXXXXXXMLPGVAKMKNQMAAANLDDNLLKRQVAIINSMTPKERRNPDLLKNSRKKRIAAGSGTKAEDINKLLKMHRTMADMMKAMGGGAKRGPMAGLANMMGFGGG--MPSPEE 519
FHPSR+ADRILGMGDIVSLVEKAAQTIDAE+AARTAERMRKG FDLND MLPGVAKMKNQ+A+ANLD+ LKRQ+A I+SMTPKER++PD+LK SRKKRIAAG+G K EDIN++LKMHR MADMMK MG G KRGPMAG+ANM+G GGG MP+PE+
Sbjct: 285 FHPSRIADRILGMGDIVSLVEKAAQTIDAERAARTAERMRKGQFDLNDLRDQLIGMQQMGGMTGLMGMLPGVAKMKNQLASANLDERFLKRQMAAIDSMTPKERKSPDILKASRKKRIAAGAGVKVEDINRMLKMHRQMADMMKVMGSG-KRGPMAGIANMLGLGGGAPMPTPEQ 458
BLAST of mRNA_P-wetherbeei_contig56055.1.1 vs. uniprot
Match: A0A1W9IDE0_9PROT (Signal recognition particle protein n=1 Tax=Proteobacteria bacterium SG_bin9 TaxID=1827385 RepID=A0A1W9IDE0_9PROT) HSP 1 Score: 232 bits (591), Expect = 4.180e-71 Identity = 133/173 (76.88%), Postives = 151/173 (87.28%), Query Frame = 1
Query: 1 FHPSRVADRILGMGDIVSLVEKAAQTIDAEKAARTAERMRKGAFDLNDXXXXXXXXXXXXXXXXXXXMLPGVAKMKNQMAAANLDDNLLKRQVAIINSMTPKERRNPDLLKNSRKKRIAAGSGTKAEDINKLLKMHRTMADMMKAMGGGAKRGPMAGLANMMGFGGGMPSPEE 519
FHPSR+A RILGMGD+VSLVEKAA IDAEKAARTAERMRKG FDL+D XXXXXXXXXX M+PG+AKMKNQ+AAANLDD ++KRQVA+I+SMT +ER+NPD+LK SRKKRIAAG+G K E++NKLLKMHR MADMMKAMGG AKRGPMAGLA MGFGGGMPSP++
Sbjct: 285 FHPSRIAGRILGMGDVVSLVEKAAAHIDAEKAARTAERMRKGQFDLSDMREQLMQXXXXXXXXXXLGMMPGIAKMKNQIAAANLDDKVVKRQVAVIDSMTRQERKNPDILKASRKKRIAAGAGLKVEEVNKLLKMHRNMADMMKAMGG-AKRGPMAGLAQAMGFGGGMPSPDQ 456
BLAST of mRNA_P-wetherbeei_contig56055.1.1 vs. uniprot
Match: W3RKJ3_9BRAD (Signal recognition particle protein n=1 Tax=Afipia sp. P52-10 TaxID=1429916 RepID=W3RKJ3_9BRAD) HSP 1 Score: 230 bits (587), Expect = 1.990e-70 Identity = 142/173 (82.08%), Postives = 156/173 (90.17%), Query Frame = 1
Query: 1 FHPSRVADRILGMGDIVSLVEKAAQTIDAEKAARTAERMRKGAFDLNDXXXXXXXXXXXXXXXXXXXMLPGVAKMKNQMAAANLDDNLLKRQVAIINSMTPKERRNPDLLKNSRKKRIAAGSGTKAEDINKLLKMHRTMADMMKAMGGGAKRGPMAGLANMMGFGGGMPSPEE 519
FHP R+A RILGMGD+VSLVEKAA IDAEKAAR AE+MRKG FDL XXXXXXXXXXXXXXXXXXXMLPG+AKMKNQ+A+ANLDD +LKRQ+A+I+SMT +ERRNPDLLKNSRKKRI+AGSG K E+INKLLKMHR MADMMKAMG G KRGPMA L NMMGFGGGMPSPE+
Sbjct: 285 FHPGRIAGRILGMGDVVSLVEKAAANIDAEKAARVAEKMRKGKFDLAXXXXXXXXXXXXXXXXXXXXMLPGIAKMKNQLASANLDDKILKRQIAVIDSMTREERRNPDLLKNSRKKRISAGSGVKVEEINKLLKMHRNMADMMKAMGQG-KRGPMAALGNMMGFGGGMPSPEQ 456 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56055.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig56055.1.1 >prot_P-wetherbeei_contig56055.1.1 ID=prot_P-wetherbeei_contig56055.1.1|Name=mRNA_P-wetherbeei_contig56055.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=173bp FHPSRVADRILGMGDIVSLVEKAAQTIDAEKAARTAERMRKGAFDLNDLRback to top mRNA from alignment at P-wetherbeei_contig56055:2..520+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig56055.1.1 ID=mRNA_P-wetherbeei_contig56055.1.1|Name=mRNA_P-wetherbeei_contig56055.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig56055:2..520+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig56055:2..520+ >mRNA_P-wetherbeei_contig56055.1.1 ID=mRNA_P-wetherbeei_contig56055.1.1|Name=mRNA_P-wetherbeei_contig56055.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig56055:2..520+ (Phaeothamnion wetherbeei SAG_119_79)back to top |