mRNA_P-wetherbeei_contig5596.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5596.3.1 vs. uniprot
Match: A0A7T0NX64_9GAMM (PEP-CTERM sorting domain-containing protein n=1 Tax=Methylomonas sp. LL1 TaxID=2785785 RepID=A0A7T0NX64_9GAMM) HSP 1 Score: 83.2 bits (204), Expect = 5.790e-15 Identity = 70/216 (32.41%), Postives = 109/216 (50.46%), Query Frame = 1
Query: 169 GDRELVLTRTSATGSVTAVVEAGLF----------SHSNGAGTTGTSLLRWDGLGGTSAESVAGAGIGSGLDFGLGADLTDGGTSMQFTIRAVEADLGGSTITLTLYTDADSFSRAT------VNLPVGDSLHI-------FLLSDLAAIISGTDGGAIMTNINAIELL----AVGVSRFDVSIDFIESATVPEPASLTLLGAGIMGLGYFGKRRK 735
G+R++++ + S +G A + +F S SN +G G ++WDGL GTSA + +G G G D+TDGG + F VEADL ++ YTDA +F+ T VN P+ S+ + F ++ +GT GA N+ A E+ AVG + D+ I I++ VPEPA++ LLGAG++ G+ +R+K
Sbjct: 134 GERDVLVNQLSNSGDPGASSQISIFHDNVFGNDVLSFSNTSGAVGFGQVQWDGLDGTSALNASGLG---------GLDITDGGVNNAFLYTIVEADLNFQ-FKISAYTDALNFAVITINQNFAVNSPLSQSIALAAFGACGFNNGVISVACTGT--GADFANLGAFEIAFNTAAVGAANIDLRIGSIQA--VPEPATIALLGAGLLATGFTARRQK 335
BLAST of mRNA_P-wetherbeei_contig5596.3.1 vs. uniprot
Match: A0A3C0TW55_9PROT (PEP-CTERM domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TW55_9PROT) HSP 1 Score: 66.2 bits (160), Expect = 2.530e-10 Identity = 49/128 (38.28%), Postives = 68/128 (53.12%), Query Frame = 1
Query: 370 DLTDGGTSMQFTIRAVEADLGGSTITLTLYTDADSFSRATVNLPVGDSLHIFLLSDLAAIISGTDGGAIMTNINAIELLAVGVS-----RFDVSIDFIESATVPEPASLTLLGAGIMGLGYFGKRRKA 738
DLTDGG+S +F + + AD + +L L+ D+DS + P + L + + SG D AIE + G + FD ++ E+ VPEPAS+TLLGAGIMGLGY +RRKA
Sbjct: 2 DLTDGGSSNKFHLVVLLAD-SAAEWSLELF-DSDSSDLYVFSNPTDITTPTNLFIPFS-VFSGID-------FTAIEKIVFGANTDDALNFDTAVGLFETVGVPEPASMTLLGAGIMGLGYMARRRKA 119
BLAST of mRNA_P-wetherbeei_contig5596.3.1 vs. uniprot
Match: UPI0019672CA8 (PEP-CTERM sorting domain-containing protein n=1 Tax=Methylococcus sp. EFPC2 TaxID=2812648 RepID=UPI0019672CA8) HSP 1 Score: 65.1 bits (157), Expect = 7.930e-9 Identity = 70/210 (33.33%), Postives = 108/210 (51.43%), Query Frame = 1
Query: 163 ILGDRE-----LVLTRTSATGSVTAVVEAGLFSHSNGAGTTGTSLLRWDGLGGTSAESVAGAGIGSGLDFGLGA-DLTDGGTSMQFTIRAVEADLGGSTITLTLYTDADSFSRATVNLPVGDSLHIFLLS----DLAAIIS-----GTDGGAIMTNINAIEL----LAVGVSRFDVSIDFIESATVPEPASLTLLGAGIMGLGYFGKRRK 735
I+GD L+ + A + +A V AG+++ S + ++WDG S V GA G GLG +L D G+ F + + AD G T + +YTDA FSR ++ V S F L+ + AA ++ G+ G A + N+ A+++ L G+S D++ID I TVPEPA+L+LLG G++G+G +RRK
Sbjct: 65 IIGDNRDISVNLINSPDPANVNASASVTAGVYNFSQDTQAGAEAQIQWDG----SNVGVEGADGGILNPTGLGGINLWDTGSLFSFDV--IFADQG-FTADVIVYTDATHFSRIRIDTVVPVSNQTFSLAFAAFENAAFVAANGGAGSAGLADLNNVGALQVILNPLGTGLS-IDLTIDNI--TTVPEPATLSLLGMGLLGMGASARRRK 264
BLAST of mRNA_P-wetherbeei_contig5596.3.1 vs. uniprot
Match: UPI0019D3F2BC (DUF11 domain-containing protein n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI0019D3F2BC) HSP 1 Score: 60.5 bits (145), Expect = 5.600e-7 Identity = 71/223 (31.84%), Postives = 107/223 (47.98%), Query Frame = 1
Query: 37 MAGAANALIIDSFDTPLNAGIGGITITSGAPAPRFDRS----TGPGILG-DRELVLTR--TSATGSVTAV-VEAGLFSHSNG--AGTTGTSLLRWDGLGGTSAESVAGAGIGSGLDFGLGADLTDGGTSMQFTIRAVEADLGGSTITLTLYTDADSF----SRATVNLPVG-DSLHIFLLSDLAAIISGTDGGAIMTNINAIELLAVGVSRFDVSIDFIESAT 660
+AG ANA++ID+F+T A I+ APA R +G GILG +REL LT T A G+ ++ V G ++++ AGT + + WDG GT +G G G DLT+GG A+ + S T+Y ADS SRA +NLP G S F++ A + G +G A +I A++L +++I +E+ +
Sbjct: 17 LAGTANAVVIDTFETDQPA------ISRTAPADTGTRVDHWISGSGILGGERELTLTLHPTIADGTTSSADVSGGAYNYNKDSTAGTFSYAFVVWDGADGTGTVDTSGLG---------GVDLTEGGRH-----DAIAISVNASDNPATVYIVADSSFGYSSRAALNLPGGISSPQTFIVPFSAFSVLGFNGPATFNSIGALQLQIYSPPSQNLAIGRVETTS 219
BLAST of mRNA_P-wetherbeei_contig5596.3.1 vs. uniprot
Match: A0A133XKD8_9RHOO (PEP-CTERM domain-containing protein n=1 Tax=Dechloromonas denitrificans TaxID=281362 RepID=A0A133XKD8_9RHOO) HSP 1 Score: 56.6 bits (135), Expect = 7.080e-6 Identity = 64/216 (29.63%), Postives = 90/216 (41.67%), Query Frame = 1
Query: 169 GDRELVLTRTSAT-------GSVTAVVEAGLFSHSNGAGTTGTSLLRWDGLGGTSAESVAGAGIGSGLDFGLGADLTDGGTSMQFTIRAVEADLGGSTITLTLYTDADSFSRATVNLPVGDSLHIFLLSDLAAIISGTD-----GGAIMTNI-------------NAIE-LLAVGVSRFDVSIDFIESATVPEPASLTLLGAGIMGLGYFGKRRKA 738
G REL + R T G V A V A + ++ GT +LRWDG G S A + +GLGADL+ + F + AD G ++ +Y A +S T+ G L L A D G + N+ A+E ++ VG V + + VPEPASL L+G G++GLG +RRKA
Sbjct: 61 GVRELYVERVGGTAAEDPDFGRVLAGVNADRYIFNSDTDVAGTGILRWDGAGIAGVSSPA-TFASNARGYGLGADLS---SYTSFLFDVLSADQGFK-FSIGVYKSAAEYSIITLTSSGGAGLRTISLGAFLAPSGDYDDPFNPGADLNVNVLNVGFDPADFLTVGALEAVINVGGGTLAVDLSLNQVTAVPEPASLALVGLGLLGLGAI-RRRKA 270
BLAST of mRNA_P-wetherbeei_contig5596.3.1 vs. uniprot
Match: A0A832N3Q1_9GAMM (PEP-CTERM sorting domain-containing protein n=1 Tax=Candidatus Tenderia electrophaga TaxID=1748243 RepID=A0A832N3Q1_9GAMM) HSP 1 Score: 55.8 bits (133), Expect = 1.080e-5 Identity = 71/262 (27.10%), Postives = 103/262 (39.31%), Query Frame = 1
Query: 49 ANALIIDSF--------DTPLNAGIGGITITSGAPAPRFDRSTGPGILGDRELVLTRTSATGSVTAVVEAGLFSHSNGAGTTGTSLLRWDGLGGTSAESVAGAGIGSGLDFGLGADLTDGGTSMQFTIRAVEADLGG------STITLTLYTDADSFSRATVNLPVGDSLHIFLLSDLAAI-ISGTDGGAIMTNINAIELLAV------------------GVSRFDVSIDFIESATVPEPASLTLLGAGIMGLGYFGKRRK 735
ANAL+ID F D PL+A + +G + ++R+ + + + T S+ + G+FSHS +G TG+S + +D LGG DLT+ G+ F I DL G +T TL S S N V S L SD A + + ++ + N E L GV + + D TVPEPA+L LLG G+ GLGY ++ K
Sbjct: 21 ANALVIDDFSGDAFGPTDAPLSA------VAAGTSSSGYNRTV--------DATSSAPNTTVSINSGASLGVFSHSQDSGVTGSSQVNFD-LGGF--------------------DLTEAGSMNAFRIGLESIDLNGFFGIVVDGVTGTL----SSSSVLAANGLVTPSFADLLFSDFAGVDFTNASSVSLFVDGNGTEALDAAFSMVGTVCSGLSSSGGSGVQGTNGNCDIPPPPTVPEPATLALLGLGLAGLGYRSRKAK 243
BLAST of mRNA_P-wetherbeei_contig5596.3.1 vs. uniprot
Match: A0A831LYX1_9BACT (PEP-CTERM sorting domain-containing protein n=1 Tax=Bryobacteraceae bacterium TaxID=2212468 RepID=A0A831LYX1_9BACT) HSP 1 Score: 55.1 bits (131), Expect = 1.940e-5 Identity = 62/246 (25.20%), Postives = 107/246 (43.50%), Query Frame = 1
Query: 49 ANALIIDSFDTPLNAGIGGITI--TSGAPAPRFDRSTGPGILG--DRELVLTRTSATGSVTAVVEAGLFSHSNGAGTTGTSLLRWDGLGGTSAESVAGAGIGSGLDFGLGADLTDGGTSMQFTIRAVEADLGGSTITLTLYTDADSFSRATVNLPVGDSLHIFLLSDLAAIISGTDGGAIMTNINAIELLAVGVSRFDVSIDFIES---------------ATVPEPASLTLLGAGIMGLGYFGKR 729
A+A +ID F+T G GG ++ A AP G+ DR+L + + V V G ++ S+G+GT+G G + V G G LDF LT T+ + ADL GST+ + ++ + P+G S+ ++ + + G ++ + A GV+ FD+ +D +++ VPEP+++ L+G G++GLG+ G+R
Sbjct: 18 ASATLIDDFETSDFPG-GGANFYESTSATAPDTGAIVVVGVSPYLDRQLFTSSVTGPAEVQTRVRFGFYTLSSGSGTSGVV--------GANYRPVGGVGT---LDFYY---LT------SMTLDVLSADLAGSTLQFYVTVGGTTYYSPS---PIGASIPTVGNPQTLSVTAASFGAPSLSAVEAFGFRITGVNNFDLDLDNLQANFREPRCGDPGQPPCGDVPEPSTMALMGIGLVGLGFAGRR 239
BLAST of mRNA_P-wetherbeei_contig5596.3.1 vs. uniprot
Match: A0A5C9C7P8_9RHOO (PEP-CTERM domain-containing protein n=1 Tax=Rhodocyclaceae bacterium TaxID=1898103 RepID=A0A5C9C7P8_9RHOO) HSP 1 Score: 53.9 bits (128), Expect = 5.410e-5 Identity = 76/276 (27.54%), Postives = 116/276 (42.03%), Query Frame = 1
Query: 7 AAAVAMSVTGMAGAANALIIDSFDTPLNAGIGGITITSGAPAPRFDRSTGP-------GILGDRELV---------LTRTSATGSVTA--VVEAGLFSHSNGAGTTGTSLLRWDGLGGTSAESVAGAGIGSGLDFGLGADLTDGGTSMQFTIRAVEADLGGSTITLTLYTDADSFSRATVNLP---VGDSLHIFLLS--------DLAAIISGTDGGAIMTNINAIELLAV---GVSRFDVSIDFIESATVPEPASLTLLGAGIMGLGYFGKRRKA 738
AA VAMS + A AA ID F T A AP D + G G +GD ++ L G+ A V +G S TGT L+RWDG+ SA ++ G+G G L D TS F + + +D GG L YT A+ +S+ + V ++ +I L + + + G G ++ A++ + G + D+++ + VPEPASL L+G G++G+G +RR A
Sbjct: 8 AAVVAMSFSSAANAALVNTIDLFTT--------------AQAPLTDTTPGGAYIMSQVGAVGDTSILGGYRDLGVNLLTNGGVGTRDANISVSSGFLDFSVDTLATGTGLVRWDGV--NSAAAIDPTGLG-------GIFLADAATS-AFALDVIFSD-GGFRFDLEAYTSANQWSKIQLISNAHVVPETTYISLAAFGLCGFNNGVVIVTCGAGGAVDFASLGALQAVIDPLGGSTAIDLTLG--QVVVVPEPASLALVGLGLLGVGALRRRRSA 256 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5596.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5596.3.1 >prot_P-wetherbeei_contig5596.3.1 ID=prot_P-wetherbeei_contig5596.3.1|Name=mRNA_P-wetherbeei_contig5596.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=247bp MGAAAVAMSVTGMAGAANALIIDSFDTPLNAGIGGITITSGAPAPRFDRSback to top mRNA from alignment at P-wetherbeei_contig5596:1409..2149- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5596.3.1 ID=mRNA_P-wetherbeei_contig5596.3.1|Name=mRNA_P-wetherbeei_contig5596.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=741bp|location=Sequence derived from alignment at P-wetherbeei_contig5596:1409..2149- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5596:1409..2149- >mRNA_P-wetherbeei_contig5596.3.1 ID=mRNA_P-wetherbeei_contig5596.3.1|Name=mRNA_P-wetherbeei_contig5596.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=741bp|location=Sequence derived from alignment at P-wetherbeei_contig5596:1409..2149- (Phaeothamnion wetherbeei SAG_119_79)back to top |