mRNA_P-wetherbeei_contig5595.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5595.1.1
Unique NamemRNA_P-wetherbeei_contig5595.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5595.1.1 vs. uniprot
Match: D8LQ61_ECTSI (Methyltransf_25 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ61_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 2.510e-31
Identity = 66/126 (52.38%), Postives = 88/126 (69.84%), Query Frame = 1
Query:    1 MRRKAIRAALIKRAADVFSKDTAETTLIAPISPTPPALIDRVLDALQLTAEDVVVDLGCGDGRWLFQAAANARCHCRGYERNPAFVSKARESASAQNLANLVTIEATDIFEAPLAGATVVIVYLFR 378
            M RK   +AL+K A + F + T ET+L+APISP+P +LI+ VLD L+L   D+VVDLGCGDGRWL  AAA   C  RG + N   + K R +A+   +++LV ++  DIF APLAG+TV+IVYLFR
Sbjct:    1 MDRKRTTSALVKYAKETFVEHTRETSLVAPISPSPESLIETVLDGLRLEPHDIVVDLGCGDGRWLL-AAARRGCAGRGLDLNEDLLRKGRLAAAEARVSSLVELDKEDIFVAPLAGSTVIIVYLFR 125          
BLAST of mRNA_P-wetherbeei_contig5595.1.1 vs. uniprot
Match: A0A7S1TVS2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVS2_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.630e-23
Identity = 53/124 (42.74%), Postives = 79/124 (63.71%), Query Frame = 1
Query:    4 RRKAIRAALIKRAADVFSKDTAETTLIAPISPTPPALIDRVLDALQLTAEDVVVDLGCGDGRWLFQAAANARCHCRGYERNPAFVSKARESASAQNLANLVTIEATDIFEAPLAGATVVIVYLF 375
            +R ++RAA+I+ + + F+     T ++APISPTP  ++  VLD + + A+DVV+DLGCGDGRWL  AA    C C GYE     ++K  E+ +A  +  LV +   DIFE  L+ A+V++ YLF
Sbjct:    6 KRASLRAAIIQASKEAFAARE-NTIIVAPISPTPLPIVQAVLDKVSVNADDVVLDLGCGDGRWLVAAAEAYGCRCVGYELEDERIAKCGEAIAAAGVGALVEVRRQDIFEVDLSEASVLVFYLF 128          
BLAST of mRNA_P-wetherbeei_contig5595.1.1 vs. uniprot
Match: A0A7S1XND7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XND7_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 2.350e-17
Identity = 43/101 (42.57%), Postives = 64/101 (63.37%), Query Frame = 1
Query:    4 RRKAIRAALIKRAADVFSKDTAETTLIAPISPTPPALIDRVLDALQLTAEDVVVDLGCGDGRWLFQAAANARCHCRGYERNPAFVSKARESASAQNLANLV 306
            +R ++RAA+I+ + + F+     T ++APISPTP  ++  VLD + + A+DVV+DLGCGDGRWL  AA    C C GYE     ++K  E+ +A  +  LV
Sbjct:    6 KRASLRAAIIQASKEAFAARE-NTIIVAPISPTPLPIVQAVLDKVSVNADDVVLDLGCGDGRWLVAAAEAYGCRCVGYELEDERIAKCGEAIAAAGVGALV 105          
BLAST of mRNA_P-wetherbeei_contig5595.1.1 vs. uniprot
Match: A0A7S1Z4D0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z4D0_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 3.830e-16
Identity = 40/104 (38.46%), Postives = 66/104 (63.46%), Query Frame = 1
Query:   79 LIAPISPTPPALIDRVLDALQLTAEDVVVDLGCGDGRWLFQAAANARCHCRGYERNPAFVSKARESASAQNLANLVTIEATDIFE----APLAGATVVIVYLFR 378
            L+APISPTP ++I  ++  L L+++ +++DLGCGDGRW+  AA   +C C G + +   ++ AR++     L   V I+  D+FE    + L+ A V+++YLFR
Sbjct:   59 LVAPISPTPKSVITSIISMLNLSSKSLLLDLGCGDGRWVISAAVECKCRCIGCDVDDERLALARQAVKDHGLECKVDIQKKDVFEVAKSSALSDADVIVMYLFR 162          
BLAST of mRNA_P-wetherbeei_contig5595.1.1 vs. uniprot
Match: A0A662XNJ5_9STRA (Methyltransf_25 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XNJ5_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 6.250e-16
Identity = 52/135 (38.52%), Postives = 76/135 (56.30%), Query Frame = 1
Query:    4 RRKAIRAALIK----RAADVFS--KDTAETTLIAPISPTPPALIDRVLDALQ-----LTAEDVVVDLGCGDGRWLFQAAANARCHCRGYERNPAFVSKARESASAQNLANLVTIEATDIFEAPLAGATVVIVYLF 375
            RR+ +RA L+     RA D  +   + A T L AP SP+P A+ID V   L+     LT ED++VDLGCGDGRWL       +C   G E + A V++ + +  AQ L + + ++  D+  A ++ A +VIVY F
Sbjct:   20 RRRHVRALLLAAAKARADDALTLKAEDATTPLFAPFSPSPLAVIDAVWTRLEEAQMALTPEDLLVDLGCGDGRWLVSGVQRFKCSALGVELDAALVARTQAAVRAQGLEHKIQVQQGDVMLADVSRARLVIVYAF 154          
BLAST of mRNA_P-wetherbeei_contig5595.1.1 vs. uniprot
Match: A0A8K1FDL0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FDL0_PYTOL)

HSP 1 Score: 78.2 bits (191), Expect = 2.210e-15
Identity = 48/118 (40.68%), Postives = 63/118 (53.39%), Query Frame = 1
Query:   37 RAADVFSKDTAETTLIAPISPTPPALIDRVLDALQ-----LTAEDVVVDLGCGDGRWLFQAAANARCHCRGYERNPAFVSKARESASAQNLANLVTIEATDIFEAPLAGATVVIVYLF 375
            RA DV +    E  L AP SP+P A+I  V   L+     LT+ D +VDLGCGDGRWL        C   G E +PA V +A+++     LA+L+ +   DI    +  AT VIVY F
Sbjct:   28 RAPDVLALSK-EKPLFAPYSPSPDAIIHAVWAFLETQQRPLTSADRLVDLGCGDGRWLISGVQRYNCSALGIELDPALVERAKQNVHLAELAHLIDVIQADIMATDITNATFVIVYAF 144          
BLAST of mRNA_P-wetherbeei_contig5595.1.1 vs. uniprot
Match: A0A225W5D9_9STRA (Putative membrane protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W5D9_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 2.880e-15
Identity = 41/104 (39.42%), Postives = 60/104 (57.69%), Query Frame = 1
Query:   79 LIAPISPTPPALIDRVLDALQ-----LTAEDVVVDLGCGDGRWLFQAAANARCHCRGYERNPAFVSKARESASAQNLANLVTIEATDIFEAPLAGATVVIVYLF 375
            L AP SP+P A+ID V   ++     LT +D++VDLGCGDGRWL        C+  G E +   V +A+E    QNL + + +E  D+ +  ++ A +VIVY F
Sbjct:   38 LFAPFSPSPVAVIDAVWTKIEDAGMALTPDDLLVDLGCGDGRWLVSGVQRFNCNAFGVELDENLVKRAKEQVIGQNLQDKIQVELGDVMQTDISNAKLVIVYAF 141          
BLAST of mRNA_P-wetherbeei_contig5595.1.1 vs. uniprot
Match: A0A2E7BIK8_9BACT (SAM-dependent methyltransferase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2E7BIK8_9BACT)

HSP 1 Score: 76.6 bits (187), Expect = 7.530e-15
Identity = 43/115 (37.39%), Postives = 69/115 (60.00%), Query Frame = 1
Query:   28 LIKRAADVFSKDTAETTLIAPISPTPPALIDRVLDALQLTAEDVVVDLGCGDGRWLFQAAANARCHCRGYERNPAFVSKARESASAQNLANLVTIEATDIFEAPLAGATVVIVYL 372
            L+ ++A VF   + +   +AP  PTP  ++DR+L+  Q+T  DVV DLGCGDGR +  AA        G + +P  +++AR +A  + + +LVT    D  +A ++ ATVV++YL
Sbjct:   16 LVTQSAPVFVNASQDPASLAPFVPTPYQVVDRMLELAQITENDVVYDLGCGDGRIVIAAAELYGARGVGIDYDPERIAEARANAQRRGVGDLVTFIEQDAMQADVSDATVVMLYL 130          
BLAST of mRNA_P-wetherbeei_contig5595.1.1 vs. uniprot
Match: A0A0P1A5E4_PLAHL (FAM173 family n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A5E4_PLAHL)

HSP 1 Score: 76.3 bits (186), Expect = 1.060e-14
Identity = 44/120 (36.67%), Postives = 68/120 (56.67%), Query Frame = 1
Query:   37 RAADVFSKDTAETT--LIAPISPTPPALIDRVLDALQLT-----AEDVVVDLGCGDGRWLFQAAANARCHCRGYERNPAFVSKARESASAQNLANLVTIEATDIFEAPLAGATVVIVYLF 375
            RA DV +    E    + AP SP+P ALID V + ++L+     ++D++VDLGCGDGRWL        C   G E +   V KA+E    ++L++ + +E  DI +  ++ A +VI+Y F
Sbjct:   19 RATDVLTPKHGECNHEIFAPFSPSPIALIDAVWNKIELSHTLLRSDDLLVDLGCGDGRWLISGVQRFHCSAFGVEIDENLVKKAKEQIQQKDLSHKIHVELGDIMQVDISQAKLVIIYAF 138          
BLAST of mRNA_P-wetherbeei_contig5595.1.1 vs. uniprot
Match: A0A329SEU7_9STRA (Methyltransf_25 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SEU7_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.120e-14
Identity = 42/110 (38.18%), Postives = 63/110 (57.27%), Query Frame = 1
Query:   61 DTAETTLIAPISPTPPALID----RVLDA-LQLTAEDVVVDLGCGDGRWLFQAAANARCHCRGYERNPAFVSKARESASAQNLANLVTIEATDIFEAPLAGATVVIVYLF 375
            D     L AP SP+P A+I+    ++ DA L LT+ED++VDLGCGDGRWL        C+  G E +   V +A+E    + L + + +E  D+ +  ++ A +VIVY F
Sbjct:   32 DDCNKELFAPFSPSPVAVINAVWRKIEDAQLSLTSEDLLVDLGCGDGRWLVSGVKRFNCNAFGVELDDNLVKRAKEQVQKEGLKHKIRVEMGDVMQTDISSAKLVIVYAF 141          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5595.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ61_ECTSI2.510e-3152.38Methyltransf_25 domain-containing protein n=2 Tax=... [more]
A0A7S1TVS2_9STRA1.630e-2342.74Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1XND7_9STRA2.350e-1742.57Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1Z4D0_9STRA3.830e-1638.46Hypothetical protein (Fragment) n=2 Tax=Ditylum br... [more]
A0A662XNJ5_9STRA6.250e-1638.52Methyltransf_25 domain-containing protein n=2 Tax=... [more]
A0A8K1FDL0_PYTOL2.210e-1540.68Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A225W5D9_9STRA2.880e-1539.42Putative membrane protein n=1 Tax=Phytophthora meg... [more]
A0A2E7BIK8_9BACT7.530e-1537.39SAM-dependent methyltransferase n=1 Tax=Acidobacte... [more]
A0A0P1A5E4_PLAHL1.060e-1436.67FAM173 family n=1 Tax=Plasmopara halstedii TaxID=4... [more]
A0A329SEU7_9STRA1.120e-1438.18Methyltransf_25 domain-containing protein n=2 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5595contigP-wetherbeei_contig5595:1..694 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LQ61
PFAMsCMAS,Methyltransf_25
Model size378
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorymitochondrion
Exons3
Evalue4.12e-32
EggNOG OGs2CYTN@1|root,2S6D0@2759|Eukaryota
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-26_006020.1
DescriptionMethyltransferase domain
Cds size378
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186832.434168-CDS-P-wetherbeei_contig5595:0..871683186832.434168-CDS-P-wetherbeei_contig5595:0..87Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5595 1..87 -
1683186832.448765-CDS-P-wetherbeei_contig5595:294..4631683186832.448765-CDS-P-wetherbeei_contig5595:294..463Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5595 295..463 -
1683186832.4573517-CDS-P-wetherbeei_contig5595:572..6941683186832.4573517-CDS-P-wetherbeei_contig5595:572..694Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5595 573..694 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5595.1.1prot_P-wetherbeei_contig5595.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5595 1..694 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5595.1.1

>prot_P-wetherbeei_contig5595.1.1 ID=prot_P-wetherbeei_contig5595.1.1|Name=mRNA_P-wetherbeei_contig5595.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=126bp
MRRKAIRAALIKRAADVFSKDTAETTLIAPISPTPPALIDRVLDALQLTA
EDVVVDLGCGDGRWLFQAAANARCHCRGYERNPAFVSKARESASAQNLAN
LVTIEATDIFEAPLAGATVVIVYLFR
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mRNA from alignment at P-wetherbeei_contig5595:1..694-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5595.1.1 ID=mRNA_P-wetherbeei_contig5595.1.1|Name=mRNA_P-wetherbeei_contig5595.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=694bp|location=Sequence derived from alignment at P-wetherbeei_contig5595:1..694- (Phaeothamnion wetherbeei SAG_119_79)
ATGAGAAGAAAGGCCATCCGCGCGGCGCTGATAAAGCGCGCCGCGGATGT CTTTTCGAAGGACACGGCCGAGACAACCCTAATAGCCCCCATCAGCCCCA CCCCGCCAGCGCTCATCGATCGGTAAGAGGCCCTTGCAGCATCTGAGGGA AAGACCGCTTTCCTGTGTTGACAAATCTTTTCCCGTCCTGTCTTGAATAG TTGCACTTTGCTCATCGATGCGTTGCGGCAGGGTGCTTGACGCTCTCCAG TTGACGGCAGAAGACGTTGTGGTGGACCTCGGCTGCGGGGATGGACGCTG GCTTTTTCAGGCCGCGGCGAATGCAAGATGTCACTGCCGCGGATACGAGC GTAACCCAGCGTTCGTTTCCAAGGCACGGGAAAGCGCTAGCGCCCAAAAT GTGAGATGGAAGCGCAACCATCCCTGTGCCGATTTACGTCATTCTGTCGA TCTATTCCTGCTCCTTCCTTACCATCGACCAAGCTTCAGTGCCGCCGGCC GGCGCCACTGCTGCCCACATCTTTCCCCGATTCTGATCTCCTTTGCCCGA CCTGCCGTATTCCGCCGTTTCCGCCCACCGTCCCCACCGTTTGTTTCGCC TCACCAGCTGGCCAACCTGGTCACAATCGAGGCGACGGACATCTTCGAGG CTCCGCTGGCCGGCGCCACCGTTGTCATCGTGTACCTCTTCCGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5595:1..694-

>mRNA_P-wetherbeei_contig5595.1.1 ID=mRNA_P-wetherbeei_contig5595.1.1|Name=mRNA_P-wetherbeei_contig5595.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=378bp|location=Sequence derived from alignment at P-wetherbeei_contig5595:1..694- (Phaeothamnion wetherbeei SAG_119_79)
ATGAGAAGAAAGGCCATCCGCGCGGCGCTGATAAAGCGCGCCGCGGATGT
CTTTTCGAAGGACACGGCCGAGACAACCCTAATAGCCCCCATCAGCCCCA
CCCCGCCAGCGCTCATCGATCGGGTGCTTGACGCTCTCCAGTTGACGGCA
GAAGACGTTGTGGTGGACCTCGGCTGCGGGGATGGACGCTGGCTTTTTCA
GGCCGCGGCGAATGCAAGATGTCACTGCCGCGGATACGAGCGTAACCCAG
CGTTCGTTTCCAAGGCACGGGAAAGCGCTAGCGCCCAAAATCTGGCCAAC
CTGGTCACAATCGAGGCGACGGACATCTTCGAGGCTCCGCTGGCCGGCGC
CACCGTTGTCATCGTGTACCTCTTCCGG
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