mRNA_P-wetherbeei_contig55940.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig55940.1.1
Unique NamemRNA_P-wetherbeei_contig55940.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig55940.1.1 vs. uniprot
Match: A0A6I3EXA1_9ACTN (PIG-L family deacetylase n=4 Tax=root TaxID=1 RepID=A0A6I3EXA1_9ACTN)

HSP 1 Score: 228 bits (581), Expect = 4.330e-73
Identity = 114/155 (73.55%), Postives = 134/155 (86.45%), Query Frame = 1
Query:   25 VGSDPLERALVVTAHPDDVDFGSAGTVSALTEAGVHVTYCIVTNGDAGGSDRSVSRSDMAALRQAEQTAAAKEVGVDDIHFLGFADGRVEANLALRAAISRVIRIVQPQLVITQSPVRNLDRIYASHPDHLAAGEAALCAVYPDARNPFAFPELL 489
            +G+  +ER LVVTAHPDDVDFGSAGTV+ LT  GV +TYC+VT+GDAGGSDR+VSR++MA+LR+AEQT+AA  VGV D+ FLG  DGRV A+L+LR  ISRVIR V+P +V+ QSP RNLDRIYASHPDHLAAGEA +CAVYPDARNPFAFPELL
Sbjct:    2 LGATDIERLLVVTAHPDDVDFGSAGTVATLTAQGVQITYCLVTDGDAGGSDRAVSRAEMASLRRAEQTSAAAHVGVHDLIFLGHPDGRVVADLSLRRDISRVIRHVRPNVVLGQSPERNLDRIYASHPDHLAAGEATMCAVYPDARNPFAFPELL 156          
BLAST of mRNA_P-wetherbeei_contig55940.1.1 vs. uniprot
Match: A0A7X9KH42_9ACTN (PIG-L family deacetylase n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A7X9KH42_9ACTN)

HSP 1 Score: 224 bits (572), Expect = 1.010e-71
Identity = 112/150 (74.67%), Postives = 132/150 (88.00%), Query Frame = 1
Query:   40 LERALVVTAHPDDVDFGSAGTVSALTEAGVHVTYCIVTNGDAGGSDRSVSRSDMAALRQAEQTAAAKEVGVDDIHFLGFADGRVEANLALRAAISRVIRIVQPQLVITQSPVRNLDRIYASHPDHLAAGEAALCAVYPDARNPFAFPELL 489
            ++R LVV AHPDDVDFGSAGT++ LT  GVHVTYC+VT+GDAGGSDRS++R++MA++R+ EQTAAA  VGV D+ FLG  DGRV A+LALR  ISRVIR V+PQ+V+ QSP RNLDRI+ASHPDHLAAGEAALCAVYPD+RNPFAFPELL
Sbjct:    7 IDRLLVVMAHPDDVDFGSAGTMATLTALGVHVTYCLVTDGDAGGSDRSITRTEMASMRRKEQTAAAAVVGVHDLVFLGHPDGRVVADLALRRDISRVIRQVRPQVVLCQSPDRNLDRIFASHPDHLAAGEAALCAVYPDSRNPFAFPELL 156          
BLAST of mRNA_P-wetherbeei_contig55940.1.1 vs. uniprot
Match: A0A7K1BCP8_9ACTN (PIG-L family deacetylase n=2 Tax=root TaxID=1 RepID=A0A7K1BCP8_9ACTN)

HSP 1 Score: 214 bits (545), Expect = 1.260e-67
Identity = 106/150 (70.67%), Postives = 128/150 (85.33%), Query Frame = 1
Query:   40 LERALVVTAHPDDVDFGSAGTVSALTEAGVHVTYCIVTNGDAGGSDRSVSRSDMAALRQAEQTAAAKEVGVDDIHFLGFADGRVEANLALRAAISRVIRIVQPQLVITQSPVRNLDRIYASHPDHLAAGEAALCAVYPDARNPFAFPELL 489
            +ERALV+TAHPDDVDFG+AGTV+ LT+ GV VTYC+VT+GDAGG D++++R DMA +R+ EQT AAKEVGV  + FLG  DGRV  +L LR  +SRVIR V+P +VITQSP RNLDRIYASHPDHLAAGEAA+ AVYPD+RNPFA+PEL+
Sbjct:    7 IERALVITAHPDDVDFGAAGTVAWLTDHGVEVTYCLVTDGDAGGFDQTIARPDMAMMRREEQTRAAKEVGVHSLIFLGHGDGRVVYDLTLRRDLSRVIRQVRPTVVITQSPERNLDRIYASHPDHLAAGEAAIAAVYPDSRNPFAYPELI 156          
BLAST of mRNA_P-wetherbeei_contig55940.1.1 vs. uniprot
Match: A0A539DTL0_9ACTN (Putative hydrolase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539DTL0_9ACTN)

HSP 1 Score: 210 bits (534), Expect = 5.890e-66
Identity = 105/148 (70.95%), Postives = 125/148 (84.46%), Query Frame = 1
Query:   46 RALVVTAHPDDVDFGSAGTVSALTEAGVHVTYCIVTNGDAGGSDRSVSRSDMAALRQAEQTAAAKEVGVDDIHFLGFADGRVEANLALRAAISRVIRIVQPQLVITQSPVRNLDRIYASHPDHLAAGEAALCAVYPDARNPFAFPELL 489
            RALV+TAHPDDVDFG+AGTV+ LT+AGV VTYC++T+GDAGG D +++R +MAA+R+ EQT AAKEVGV  + FLG  DGRV A+LALR  +SRVIR V+P L I QSP RNLDRIYASHPDHLAAGEA++ AVYPDARNPFA  EL+
Sbjct:    9 RALVITAHPDDVDFGAAGTVATLTDAGVDVTYCLITDGDAGGFDLTIARPEMAAMRRLEQTRAAKEVGVTSLIFLGHGDGRVVADLALRRDLSRVIRQVRPSLAIIQSPERNLDRIYASHPDHLAAGEASIAAVYPDARNPFAHTELV 156          
BLAST of mRNA_P-wetherbeei_contig55940.1.1 vs. uniprot
Match: A0A6I3WQQ6_9ACTN (PIG-L family deacetylase n=2 Tax=root TaxID=1 RepID=A0A6I3WQQ6_9ACTN)

HSP 1 Score: 209 bits (531), Expect = 1.900e-65
Identity = 101/150 (67.33%), Postives = 127/150 (84.67%), Query Frame = 1
Query:   40 LERALVVTAHPDDVDFGSAGTVSALTEAGVHVTYCIVTNGDAGGSDRSVSRSDMAALRQAEQTAAAKEVGVDDIHFLGFADGRVEANLALRAAISRVIRIVQPQLVITQSPVRNLDRIYASHPDHLAAGEAALCAVYPDARNPFAFPELL 489
            ++RALV+TAHPDDVDFG+AG+V+ + +AG+ VTYC+VT+GDAGG D++++R  MA  R+ EQT AAKEVGV+++ FLGF DGRVE NL LR A+SRVIR V+PQ V+ QSP  NL RIYASHPDHLA G+A++ AVYPDARNPFA+PELL
Sbjct:    7 VQRALVITAHPDDVDFGAAGSVANMADAGIEVTYCLVTDGDAGGFDQTIARPQMALTRREEQTRAAKEVGVENLVFLGFRDGRVEYNLELRCALSRVIREVRPQRVLVQSPELNLARIYASHPDHLATGQASIAAVYPDARNPFAYPELL 156          
BLAST of mRNA_P-wetherbeei_contig55940.1.1 vs. uniprot
Match: A0A7K0VI53_9ACTN (PIG-L family deacetylase n=2 Tax=root TaxID=1 RepID=A0A7K0VI53_9ACTN)

HSP 1 Score: 208 bits (529), Expect = 3.830e-65
Identity = 100/151 (66.23%), Postives = 127/151 (84.11%), Query Frame = 1
Query:   40 LERALVVTAHPDDVDFGSAGTVSALTEAGVHVTYCIVTNGDAGGSDRSVSRSDMAALRQAEQTAAAKEVGVDDIHFLGFADGRVEANLALRAAISRVIRIVQPQLVITQSPVRNLDRIYASHPDHLAAGEAALCAVYPDARNPFAFPELLA 492
            ++RALV+TAHPDDVDFG+AG V+ +T+AG+ VTYC+VT+GDAGG D++++R  MA +R+ EQ  A KEVGV+ + FLG ADGRVE NL LR A+SRVIR V+PQ V+ QSP  NL R+YASHPDHLAAG+A++ A+YPDARNPFA+PELLA
Sbjct:    7 VQRALVITAHPDDVDFGAAGAVANMTDAGIEVTYCLVTDGDAGGFDQTIARPQMALMRRDEQRRAGKEVGVESLIFLGMADGRVEYNLQLRCALSRVIREVRPQRVLVQSPELNLARLYASHPDHLAAGQASIAAIYPDARNPFAYPELLA 157          
BLAST of mRNA_P-wetherbeei_contig55940.1.1 vs. uniprot
Match: A0A6C7EED9_ILUCY (Putative hydrolase n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7EED9_ILUCY)

HSP 1 Score: 207 bits (526), Expect = 1.060e-64
Identity = 103/151 (68.21%), Postives = 124/151 (82.12%), Query Frame = 1
Query:   31 SDPLERALVVTAHPDDVDFGSAGTVSALTEAGVHVTYCIVTNGDAGGSDRSVSRSDMAALRQAEQTAAAKEVGVDDIHFLGFADGRVEANLALRAAISRVIRIVQPQLVITQSPVRNLDRIYASHPDHLAAGEAALCAVYPDARNPFAFPE 483
            ++ +ERALVV AHPDDVDFG+AGTV+ LT+AGV VTYC+VT+G AGG DRS+ R++MA +R+AEQT AA EVGV D+ FLG  DG V A++ LR  IS VIR V+PQ+VITQ+PVR+L   Y SHPDHLA GEA +CAVYPDARNPFAFPE
Sbjct:    4 TNEIERALVVMAHPDDVDFGAAGTVANLTDAGVDVTYCLVTDGQAGGFDRSIPRTEMATIRRAEQTEAAAEVGVTDLRFLGHMDGTVVADMQLRHDISVVIRQVRPQVVITQNPVRDLSSTYGSHPDHLATGEATMCAVYPDARNPFAFPE 154          
BLAST of mRNA_P-wetherbeei_contig55940.1.1 vs. uniprot
Match: UPI0020038247 (PIG-L family deacetylase n=1 Tax=Aciditerrimonas ferrireducens TaxID=667306 RepID=UPI0020038247)

HSP 1 Score: 207 bits (526), Expect = 1.360e-64
Identity = 103/154 (66.88%), Postives = 123/154 (79.87%), Query Frame = 1
Query:   28 GSDPLERALVVTAHPDDVDFGSAGTVSALTEAGVHVTYCIVTNGDAGGSDRSVSRSDMAALRQAEQTAAAKEVGVDDIHFLGFADGRVEANLALRAAISRVIRIVQPQLVITQSPVRNLDRIYASHPDHLAAGEAALCAVYPDARNPFAFPELL 489
            G DP+   LVVTAHPDDVDFG AGTV+  T+AGV V+YC+VT+GDAGG DRSV R +M  +R+AEQ AAAKEVGV+++ FLG+ DGR+  +L LR  ISRVIR V+P  V+ QSP R+  RI+ASHPDHLAA EA +CAVYPDARNPFA PELL
Sbjct:   13 GEDPVRSVLVVTAHPDDVDFGMAGTVATWTDAGVRVSYCVVTDGDAGGFDRSVPRREMPRIRRAEQQAAAKEVGVEEVVFLGYPDGRLAPSLELRRDISRVIRQVRPDRVVCQSPERSWSRIFASHPDHLAAAEATVCAVYPDARNPFAHPELL 166          
BLAST of mRNA_P-wetherbeei_contig55940.1.1 vs. uniprot
Match: A0A7Y1ZU58_9ACTN (PIG-L family deacetylase n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y1ZU58_9ACTN)

HSP 1 Score: 206 bits (524), Expect = 1.940e-64
Identity = 102/146 (69.86%), Postives = 121/146 (82.88%), Query Frame = 1
Query:   40 LERALVVTAHPDDVDFGSAGTVSALTEAGVHVTYCIVTNGDAGGSDRSVSRSDMAALRQAEQTAAAKEVGVDDIHFLGFADGRVEANLALRAAISRVIRIVQPQLVITQSPVRNLDRIYASHPDHLAAGEAALCAVYPDARNPFAF 477
            +ER LVVTAHPDDVDFG+AGTV+ LT+AGV V YC+VT+G AGG DR++ RS+MAA+R+ EQT AA EVGV  ++FLG  DG V A++ALR  IS VIR V+PQ+VITQSP+RNLD  Y SHPDHLA GEA +CAVYPDARNPFAF
Sbjct:    7 IERVLVVTAHPDDVDFGAAGTVANLTDAGVEVVYCLVTDGQAGGFDRTIPRSEMAAIRREEQTKAAAEVGVTRLYFLGHTDGAVVADMALREDISMVIREVRPQVVITQSPLRNLDSTYGSHPDHLATGEATMCAVYPDARNPFAF 152          
BLAST of mRNA_P-wetherbeei_contig55940.1.1 vs. uniprot
Match: A0A3C2AXZ3_9ACTN (PIG-L domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2AXZ3_9ACTN)

HSP 1 Score: 205 bits (521), Expect = 3.670e-64
Identity = 101/142 (71.13%), Postives = 122/142 (85.92%), Query Frame = 1
Query:   64 AHPDDVDFGSAGTVSALTEAGVHVTYCIVTNGDAGGSDRSVSRSDMAALRQAEQTAAAKEVGVDDIHFLGFADGRVEANLALRAAISRVIRIVQPQLVITQSPVRNLDRIYASHPDHLAAGEAALCAVYPDARNPFAFPELL 489
            AHPDDVDFGSAGT++ LT  GV V YC+VT+GDAGGSDR++SR++MAA+R+ EQT AA  VGV+ + FLG+ DGRVE  L LR  ISRVIR V+PQ+V++QSP RNLDRI+ASHPDHLAAGEAA+ AVYPD+RNPFA+PELL
Sbjct:    2 AHPDDVDFGSAGTMAMLTSRGVEVHYCLVTDGDAGGSDRTISRAEMAAIRRKEQTEAAAMVGVEHLVFLGYPDGRVEPTLELRRDISRVIREVRPQVVVSQSPERNLDRIFASHPDHLAAGEAAMSAVYPDSRNPFAYPELL 143          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig55940.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I3EXA1_9ACTN4.330e-7373.55PIG-L family deacetylase n=4 Tax=root TaxID=1 RepI... [more]
A0A7X9KH42_9ACTN1.010e-7174.67PIG-L family deacetylase n=2 Tax=Actinobacteria Ta... [more]
A0A7K1BCP8_9ACTN1.260e-6770.67PIG-L family deacetylase n=2 Tax=root TaxID=1 RepI... [more]
A0A539DTL0_9ACTN5.890e-6670.95Putative hydrolase n=1 Tax=Acidimicrobiaceae bacte... [more]
A0A6I3WQQ6_9ACTN1.900e-6567.33PIG-L family deacetylase n=2 Tax=root TaxID=1 RepI... [more]
A0A7K0VI53_9ACTN3.830e-6566.23PIG-L family deacetylase n=2 Tax=root TaxID=1 RepI... [more]
A0A6C7EED9_ILUCY1.060e-6468.21Putative hydrolase n=1 Tax=Ilumatobacter coccineus... [more]
UPI00200382471.360e-6466.88PIG-L family deacetylase n=1 Tax=Aciditerrimonas f... [more]
A0A7Y1ZU58_9ACTN1.940e-6469.86PIG-L family deacetylase n=1 Tax=Ilumatobacter sp.... [more]
A0A3C2AXZ3_9ACTN3.670e-6471.13PIG-L domain-containing protein n=1 Tax=Acidimicro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig55940contigP-wetherbeei_contig55940:3..494 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1313172.YM304_26840
PFAMsPIG-L
Model size492
Max annot lvl84992|Acidimicrobiia
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.73e-65
EggNOG OGsCOG2120@1|root,COG2120@2|Bacteria,2GMVD@201174|Actinobacteria,4CMYW@84992|Acidimicrobiia
DescriptionGlcNAc-PI de-N-acetylase
Cds size492
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186832.3076773-CDS-P-wetherbeei_contig55940:2..4941683186832.3076773-CDS-P-wetherbeei_contig55940:2..494Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig55940 3..494 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig55940.1.1prot_P-wetherbeei_contig55940.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig55940 3..494 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig55940.1.1

>prot_P-wetherbeei_contig55940.1.1 ID=prot_P-wetherbeei_contig55940.1.1|Name=mRNA_P-wetherbeei_contig55940.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=164bp
MAELTLSTVGSDPLERALVVTAHPDDVDFGSAGTVSALTEAGVHVTYCIV
TNGDAGGSDRSVSRSDMAALRQAEQTAAAKEVGVDDIHFLGFADGRVEAN
LALRAAISRVIRIVQPQLVITQSPVRNLDRIYASHPDHLAAGEAALCAVY
PDARNPFAFPELLA
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mRNA from alignment at P-wetherbeei_contig55940:3..494-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig55940.1.1 ID=mRNA_P-wetherbeei_contig55940.1.1|Name=mRNA_P-wetherbeei_contig55940.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=492bp|location=Sequence derived from alignment at P-wetherbeei_contig55940:3..494- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCGAGCTGACCCTGTCCACCGTCGGGTCCGACCCCCTCGAGCGCGC CCTCGTGGTCACGGCGCACCCCGACGACGTCGACTTCGGCTCGGCGGGAA CGGTGTCGGCGCTGACCGAGGCCGGCGTGCACGTGACGTACTGCATCGTC ACCAACGGCGATGCCGGCGGCAGCGATCGCTCCGTCTCACGATCCGACAT GGCGGCGCTGCGTCAGGCCGAGCAGACCGCGGCGGCGAAGGAGGTCGGTG TCGATGACATCCACTTCCTCGGTTTCGCCGACGGTCGGGTCGAGGCGAAC CTCGCGCTGCGGGCGGCGATCAGCCGCGTCATCCGCATCGTGCAGCCGCA ACTGGTGATCACCCAGTCGCCGGTGCGCAACCTCGATCGCATCTACGCCA GCCACCCGGATCACCTCGCCGCCGGCGAAGCAGCGCTGTGCGCGGTGTAC CCGGATGCACGGAACCCGTTCGCCTTCCCCGAGCTGCTGGCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig55940:3..494-

>mRNA_P-wetherbeei_contig55940.1.1 ID=mRNA_P-wetherbeei_contig55940.1.1|Name=mRNA_P-wetherbeei_contig55940.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=492bp|location=Sequence derived from alignment at P-wetherbeei_contig55940:3..494- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCGAGCTGACCCTGTCCACCGTCGGGTCCGACCCCCTCGAGCGCGC
CCTCGTGGTCACGGCGCACCCCGACGACGTCGACTTCGGCTCGGCGGGAA
CGGTGTCGGCGCTGACCGAGGCCGGCGTGCACGTGACGTACTGCATCGTC
ACCAACGGCGATGCCGGCGGCAGCGATCGCTCCGTCTCACGATCCGACAT
GGCGGCGCTGCGTCAGGCCGAGCAGACCGCGGCGGCGAAGGAGGTCGGTG
TCGATGACATCCACTTCCTCGGTTTCGCCGACGGTCGGGTCGAGGCGAAC
CTCGCGCTGCGGGCGGCGATCAGCCGCGTCATCCGCATCGTGCAGCCGCA
ACTGGTGATCACCCAGTCGCCGGTGCGCAACCTCGATCGCATCTACGCCA
GCCACCCGGATCACCTCGCCGCCGGCGAAGCAGCGCTGTGCGCGGTGTAC
CCGGATGCACGGAACCCGTTCGCCTTCCCCGAGCTGCTGGCC
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