mRNA_P-wetherbeei_contig559.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig559.2.1 vs. uniprot
Match: A0A3C0TTW7_9PROT (Cytochrome c family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TTW7_9PROT) HSP 1 Score: 219 bits (557), Expect = 7.360e-70 Identity = 114/184 (61.96%), Postives = 142/184 (77.17%), Query Frame = 1
Query: 1 MDSYTINKIAGAILGTFLLLFAISLASEQIFPEPES----HGTESAKAEAPAEGXXXXXXXXAAGEVSLAAALAAGNADNGGKVFKKCAACHAVDAAAGNKVGPNLHDVVGRKVASAAGFGYSPAMTGHGGEWTYENLDKYLTNPKAVVPGNKMAFAGLKKQADRADVILYLRANSPKAPPLPK 540
MDS+TINKI GA+LG FL +FAI+LASE +FP E+ HG +A+ EA A A E+SL+AALAAG+A +G KVFKKCAACH+V+AA GNK+GPNLH ++GR+VA+A GFGYS AM +GG W+YE LD+YL++PK +PGNKMAFAGLKK DRADV+LYLR +SP APPLP+
Sbjct: 5 MDSFTINKILGAVLGAFLFIFAINLASEAVFPGRETPEGGHGGGTAQPEAEASAGEEKAPAQAE-EISLSAALAAGDAGSGAKVFKKCAACHSVEAADGNKIGPNLHGILGREVATAEGFGYSSAMQAYGGIWSYERLDQYLSDPKGTIPGNKMAFAGLKKATDRADVMLYLRESSPDAPPLPE 187
BLAST of mRNA_P-wetherbeei_contig559.2.1 vs. uniprot
Match: A0A353LQS8_9PROT (Cytochrome c family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LQS8_9PROT) HSP 1 Score: 176 bits (446), Expect = 8.600e-53 Identity = 107/186 (57.53%), Postives = 128/186 (68.82%), Query Frame = 1
Query: 1 MDSYTINKIAGAILGTFLLLFAISLASEQIFPEPE-SHGTESAKAEAPAEGXXXXXXXXAA------GEVSLAAALAAGNADNGGKVFKKCAACHAVDAAAGNKVGPNLHDVVGRKVASAAGFGYSPAMTGHGGEWTYENLDKYLTNPKAVVPGNKMAFAGLKKQADRADVILYLRANSPKAPPLP 537
MDS+ NKIAGA+LG+ LLLFAI+ +FP +H + EA XXXXXXXX GE +LAA LAAG+AD G KVFKKCAACH V+A NKVGPNLHD+VGR++A+ F YS A+ G GGEWTY+ L++YL PK +PGNKMAFAGL+K DRA+VILYLR N P LP
Sbjct: 17 MDSFFFNKIAGAVLGSVLLLFAINEIGNIVFPHGSGTHAADGEMGEAAKXXXXXXXXXXXXXXXXXKGE-NLAALLAAGSADKGAKVFKKCAACHTVEAGGKNKVGPNLHDIVGRELAALDSFSYSDALAGFGGEWTYDRLNQYLEKPKDFIPGNKMAFAGLRKPQDRANVILYLRENGDAKPALP 201
BLAST of mRNA_P-wetherbeei_contig559.2.1 vs. uniprot
Match: A0A3M1JMW5_9PROT (Cytochrome c family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1JMW5_9PROT) HSP 1 Score: 158 bits (400), Expect = 4.710e-46 Identity = 94/182 (51.65%), Postives = 110/182 (60.44%), Query Frame = 1
Query: 1 MDSYTINKIAGAILGTFLLLFAISLASEQIFPE--PESHGTESAKAEAPAEGXXXXXXXXAAGEVSLAAALAAGNADNGGKVFKKCAACHAVDAAAGNKVGPNLHDVVGRKVASAAGFGYSPAMTGHGGEWTYENLDKYLTNPKAVVPGNKMAFAGLKKQADRADVILYLRANSPKAPPLPK 540
MDS+ INKI GA+L L+LF S+ IF PE G E A E G A EVSLA LAA N D G V KKCAACH+ + NKVGPNL+ VVGR +A+ GF YS A+ G WTYE LD +L NPK VPG KMAFAG+KK RAD+ILYLR+ + PPLP+
Sbjct: 1 MDSFEINKIVGAVLFALLVLFGTRTFSDIIFAAHAPEKPGFEVAVEEHGGAGAGEEKKE--AQEVSLAQLLAAANPDKGKSVAKKCAACHSFEKGGPNKVGPNLYGVVGRDIAAIDGFAYSEALKSKEGNWTYEALDHFLANPKGFVPGTKMAFAGVKKAKQRADLILYLRSFNDNPPPLPE 180
BLAST of mRNA_P-wetherbeei_contig559.2.1 vs. uniprot
Match: A8IGU6_AZOC5 (Cytochrome c n=2 Tax=Azorhizobium TaxID=6 RepID=A8IGU6_AZOC5) HSP 1 Score: 155 bits (392), Expect = 7.880e-45 Identity = 84/180 (46.67%), Postives = 112/180 (62.22%), Query Frame = 1
Query: 1 MDSYTINKIAGAILGTFLLLFAISLASEQIFPEPESHGTESAKAEAPAEGXXXXXXXXAAGEVSLAAALAAGNADNGGKVFKKCAACHAVDAAAGNKVGPNLHDVVGRKVASAAGFGYSPAMTGHGGEWTYENLDKYLTNPKAVVPGNKMAFAGLKKQADRADVILYLRANSPKAPPLPK 540
MDS+ +NKIAGA+LGT L + + SE +F PE+ + P G AA EV +A L + + G V K+CA+CH AG KVGP+L+ VVGRK AS AGF YS A+ G GG+W++++L+ +LTNPKA VPG MAFAG+ K+++RAD+I YL S PLPK
Sbjct: 1 MDSFELNKIAGAVLGTLTLTLGLGIVSEILFT-PEAPAKPGYEIAVPEGGATGQAAPKAAAEVPIAQLLPTASVEKGANVAKRCASCHNFAEGAGAKVGPDLYGVVGRKKASVAGFAYSSALQGKGGDWSFDDLNAFLTNPKAYVPGTAMAFAGIPKESERADLIAYLNTLSHSPLPLPK 179
BLAST of mRNA_P-wetherbeei_contig559.2.1 vs. uniprot
Match: UPI00041A4D0C (cytochrome c family protein n=1 Tax=Azorhizobium doebereinerae TaxID=281091 RepID=UPI00041A4D0C) HSP 1 Score: 155 bits (391), Expect = 1.300e-44 Identity = 89/182 (48.90%), Postives = 110/182 (60.44%), Query Frame = 1
Query: 1 MDSYTINKIAGAILGTFLLLFAISLASEQIF-PE-PESHGTESAKAEAPAEGXXXXXXXXAAGEVSLAAALAAGNADNGGKVFKKCAACHAVDAAAGNKVGPNLHDVVGRKVASAAGFGYSPAMTGHGGEWTYENLDKYLTNPKAVVPGNKMAFAGLKKQADRADVILYLRANSPKAPPLPK 540
MDS+ +NKIAGA+LGT L + + SE +F PE P G E A E PAE AA EV +A L + D G V K+C ACH AG KVGP+L+ VVGRK S AGF YS AM GG+WT+++L+ +LTNPK VPG MAFAG+ K+ +RAD+I YL S P PK
Sbjct: 1 MDSFELNKIAGAVLGTLTLTIGLGIVSEILFTPEAPAKPGYEIAVQEGPAE----TGAPKAAAEVPIAQLLPTASVDKGANVAKRCGACHNFTEGAGAKVGPDLYGVVGRKKGSVAGFSYSAAMQAKGGDWTFDDLNAFLTNPKGYVPGTAMAFAGIPKEGERADLIAYLNTLSHSPLPFPK 178
BLAST of mRNA_P-wetherbeei_contig559.2.1 vs. uniprot
Match: A0A3M1K588_9PROT (Cytochrome c family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1K588_9PROT) HSP 1 Score: 155 bits (392), Expect = 2.780e-44 Identity = 88/183 (48.09%), Postives = 113/183 (61.75%), Query Frame = 1
Query: 1 MDSYTINKIA-GAILGTFLLLFAISLASEQI-FPEPESHGTESAKAEAPAEGXXXXXXXXAAGEVSLAAALAAGNADNGGKVFKKCAACHAVDAAAGNKVGPNLHDVVGRKVASAAGFGYSPAMTGHGGEWTYENLDKYLTNPKAVVPGNKMAFAGLKKQADRADVILYLRANSPKAPPLPKN 543
+D T NKIA G I+ ++ A E I EPE A AE A+ A G SLA LA +A+ G KVF+KC ACH +DA AGN++GPNLHD+VG VA F YS A+ HGG WTYE LD ++ +P+A +PGNKMAFAG++K DRAD+I +LRAN+ PPLP++
Sbjct: 45 VDIMTANKIAAGFIISLLVVKLGAWFAEETIEAQEPEEPAYRVAVAETGADQKGAAAEAAAKGP-SLAELLANASAEKGAKVFRKCGACHTIDAGAGNRIGPNLHDIVGAPVAHRDDFSYSDAVKNHGGTWTYELLDHWIADPRATIPGNKMAFAGIRKAKDRADLIAFLRANTSNPPPLPES 226
BLAST of mRNA_P-wetherbeei_contig559.2.1 vs. uniprot
Match: A0A3M1A1W3_9PROT (Cytochrome c family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1A1W3_9PROT) HSP 1 Score: 154 bits (388), Expect = 1.790e-43 Identity = 86/183 (46.99%), Postives = 114/183 (62.30%), Query Frame = 1
Query: 1 MDSYTINKIAGAILGTFLLLFAISLASEQIF----PEPESHGTESAKAEAPAEGXXXXXXXXAAGEVSLAAALAAGNADNGGKVFKKCAACHAVDAAAGNKVGPNLHDVVGRKVASAAGFGYSPAMTGHGGEWTYENLDKYLTNPKAVVPGNKMAFAGLKKQADRADVILYLRANSPKAPPLP 537
+D+ TINKI ++L LL+ S+ SE +F PE ++ A++EA A E +LA L A + D G +VF KC ACH+V+ A GNKVGPNLH+VVG +A F YS A+ HGG WTYE LD +LT+PK +PGNKMAF G+ K +DRA++I +LRAN+ PPLP
Sbjct: 54 VDTMTINKIVASLLIGLLLVKVGSMLSESVFDVEAPEHPAYAVAVAESEA---AETAEAAPAKAAEPTLAELLTAASPDKGKRVFAKCMACHSVNPADGNKVGPNLHNVVGAPIAHRDDFNYSDALKSHGGTWTYEMLDHWLTSPKDTIPGNKMAFGGVSKASDRANLIAFLRANTENPPPLP 233
BLAST of mRNA_P-wetherbeei_contig559.2.1 vs. uniprot
Match: A0A3M1PYY2_9PROT (Cytochrome c family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1PYY2_9PROT) HSP 1 Score: 151 bits (382), Expect = 3.150e-43 Identity = 86/180 (47.78%), Postives = 108/180 (60.00%), Query Frame = 1
Query: 4 DSYTINKI-AGAILGTFLLLFAISLASEQIFPE-PESHGTESAKAEAPAEGXXXXXXXXAAGEVSLAAALAAGNADNGGKVFKKCAACHAVDAAAGNKVGPNLHDVVGRKVASAAGFGYSPAMTGHGGEWTYENLDKYLTNPKAVVPGNKMAFAGLKKQADRADVILYLRANSPKAPPLP 537
D +NK+ AG ++ + A E I PE P+ A AE PA A SLAA LA +A+ G K+F KCAACH + AGN++GPNLH +VG +A + F YS A+ HGG WTYE LD ++ NP+ +PGNKMAFAGLK+ DRADVI YLRAN+P PPLP
Sbjct: 4 DIMEVNKVVAGILVAGLVAKLGGWFADELIEPELPDKPAYPVAVAEQPA---GQPAQPEAKKGPSLAALLAQASAEKGRKIFGKCAACHTIAEGAGNRIGPNLHGIVGAPIAHRSDFAYSDALKNHGGTWTYEMLDHWIANPRKAIPGNKMAFAGLKRAKDRADVIAYLRANTPNPPPLP 180
BLAST of mRNA_P-wetherbeei_contig559.2.1 vs. uniprot
Match: UPI0004945F9A (cytochrome c family protein n=1 Tax=Bosea sp. 117 TaxID=1125973 RepID=UPI0004945F9A) HSP 1 Score: 151 bits (381), Expect = 5.820e-43 Identity = 84/182 (46.15%), Postives = 111/182 (60.99%), Query Frame = 1
Query: 1 MDSYTINKIAGAILGTFLLLFAISLASEQIFPE--PESHGTESAKAEAPAEGXXXXXXXXAAGEVSLAAALAAGNADNGGKVFKKCAACHAVDAAAGNKVGPNLHDVVGRKVASAAGFGYSPAMTGHGGEWTYENLDKYLTNPKAVVPGNKMAFAGLKKQADRADVILYLRANSPKAPPLPK 540
MDS+ +NKIAGA+LGT +S+ +E +F + P G E A EA + G A +V +A L +A+ G V KKCAACH AG KVGP+L+ +VGR VASA GF YS AM HGG WT+++L ++ NPKA +PG M FAGL K+ DRAD+++YL S PLP+
Sbjct: 1 MDSFEVNKIAGAVLGTLTFTLGLSIFAEALFHQNPPAKPGFEIAVKEAASGGEAQAP----AADVPIADLLGKASAEKGEAVAKKCAACHNFQEGAGAKVGPDLYGIVGRAVASAPGFAYSAAMKAHGGTWTFQDLSDFIKNPKADIPGTAMGFAGLAKETDRADLLVYLNTLSHSPQPLPQ 178
BLAST of mRNA_P-wetherbeei_contig559.2.1 vs. uniprot
Match: A0A848JX86_9HYPH (Cytochrome c n=6 Tax=Xanthobacteraceae TaxID=335928 RepID=A0A848JX86_9HYPH) HSP 1 Score: 149 bits (376), Expect = 2.940e-42 Identity = 89/181 (49.17%), Postives = 109/181 (60.22%), Query Frame = 1
Query: 1 MDSYTINKIAGAILGTFLLLFAISLASEQIF-PE-PESHGTESAKAEAPAEGXXXXXXXXAAGEVSLAAALAAGNADNGGKVFKKCAACHAVDAAAGNKVGPNLHDVVGRKVASAAGFGYSPAMTGHGGEWTYENLDKYLTNPKAVVPGNKMAFAGLKKQADRADVILYLRANSPKAPPLP 537
MDS+ +NKIAGA+LGT L + + SE +F PE P G E A E G AA EV + A + + G KKCAACH AG KVGP+L+ +VGR VASAAGF YS AM GG+WT L+ +LTNPKA VPG MAFAG+ K+A+RAD+I YL + S PLP
Sbjct: 1 MDSFELNKIAGAVLGTLTLTLGLGIVSEILFTPEAPAKPGFEIAVQE----GAAAAGAPKAAAEVPIEQLFATASIEKGQAAAKKCAACHNFQEGAGAKVGPDLYGIVGRPVASAAGFAYSAAMKAKGGDWTALALNTFLTNPKAAVPGTAMAFAGIGKEAERADLIAYLNSLSHDPKPLP 177 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig559.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig559.2.1 >prot_P-wetherbeei_contig559.2.1 ID=prot_P-wetherbeei_contig559.2.1|Name=mRNA_P-wetherbeei_contig559.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=182bp MDSYTINKIAGAILGTFLLLFAISLASEQIFPEPESHGTESAKAEAPAEGback to top mRNA from alignment at P-wetherbeei_contig559:1000..1545- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig559.2.1 ID=mRNA_P-wetherbeei_contig559.2.1|Name=mRNA_P-wetherbeei_contig559.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=546bp|location=Sequence derived from alignment at P-wetherbeei_contig559:1000..1545- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig559:1000..1545- >mRNA_P-wetherbeei_contig559.2.1 ID=mRNA_P-wetherbeei_contig559.2.1|Name=mRNA_P-wetherbeei_contig559.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=546bp|location=Sequence derived from alignment at P-wetherbeei_contig559:1000..1545- (Phaeothamnion wetherbeei SAG_119_79)back to top |