mRNA_P-wetherbeei_contig558.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig558.1.1 vs. uniprot
Match: D8LBW3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBW3_ECTSI) HSP 1 Score: 108 bits (269), Expect = 2.010e-25 Identity = 58/134 (43.28%), Postives = 84/134 (62.69%), Query Frame = 1
Query: 1 AGIMLTGR---TIDGFQEVFQSSFLGHFLLTKLLLDLIEATDGARVINLSSLMHRFGSTDWEGAALGSGKGYLDLASMGINPAGYADAKMAQLLFAEELRRRFHERHVNAMAIAVHPGTVKTEVWRSAPFIVRP 393
AG+ +T T DG VF +F+GHF LT LL LI++T ARV+ LSS+MH G TDWE A +G K + YAD+K+A ++FA+EL++RF +A A+AV+PG V++++WR+ P +V P
Sbjct: 149 AGVGITDGPRVTADGLDLVFGVNFVGHFCLTNELLPLIQSTPAARVVCLSSVMHHSGGTDWESAVMGHPK---------RRGSTYADSKLAMVIFAKELKKRFAAAGSSATAVAVNPGAVRSDIWRNVPKLVMP 273
BLAST of mRNA_P-wetherbeei_contig558.1.1 vs. uniprot
Match: A0A835ZF30_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF30_9STRA) HSP 1 Score: 104 bits (259), Expect = 5.890e-24 Identity = 55/126 (43.65%), Postives = 79/126 (62.70%), Query Frame = 1
Query: 1 AGIMLTGRTIDGFQEVFQSSFLGHFLLTKLLLDLIEATDGARVINLSSLMHRFGSTDWEGAALGSGKGYLDLASMGINPAGYADAKMAQLLFAEELRRRFHERHVNAMAIAVHPGTVKTEVWRSAP 378
AG + G T G F + +LG +++T +L D I T GARVIN+SS +H +G+T WE AA+G +G D M + YAD+K+A +LF ELRRRF + +A+AI V PG V +++WR+ P
Sbjct: 143 AGQVDPGTTDQGLSSTFMADYLGAYMMTTMLYDTIRNTQGARVINVSSPLHHYGTTKWEDAAMGR-RGEPDF--MNVLFHCYADSKLAMMLFTNELRRRFAADNCSAVAICVSPGNVNSDIWRTVP 265
BLAST of mRNA_P-wetherbeei_contig558.1.1 vs. uniprot
Match: K8YSS2_NANGC (Short-chain dehydrogenase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YSS2_NANGC) HSP 1 Score: 103 bits (256), Expect = 7.780e-24 Identity = 53/125 (42.40%), Postives = 82/125 (65.60%), Query Frame = 1
Query: 16 TGRTIDGFQEVFQSSFLGHFLLTKLLLDLIEATDGARVINLSSLMHRFGSTDWEGAALGSGKGYLDLASMGINPAGYADAKMAQLLFAEELRRRFHERHVNAMAIAVHPGTVKTEVWRSAPFIVR 390
+GRT +GF+ +F +++LGHF LTKLL+D+++AT +R++++SSLMH FG DW+G+ G+ + D I + Y D+K+A +L ELR R + + AIAV PG V +++WRS P R
Sbjct: 110 SGRTKEGFEIMFGTNYLGHFYLTKLLMDVVKATPDSRIVSVSSLMHEFGCLDWQGSLSGNYRALKDR----IFSSRYNDSKLALVLMTLELRHRL--KGTSVRAIAVSPGAVASDIWRSFPLWYR 228
BLAST of mRNA_P-wetherbeei_contig558.1.1 vs. uniprot
Match: A0A524JC42_9CHLR (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=A0A524JC42_9CHLR) HSP 1 Score: 99.4 bits (246), Expect = 1.790e-22 Identity = 53/123 (43.09%), Postives = 76/123 (61.79%), Query Frame = 1
Query: 1 AGIMLT--GRTIDGFQEVFQSSFLGHFLLTKLLLDLIEATDGARVINLSSLMHRFGSTDWEGAALGSGKGYLDLASMGINPAGYADAKMAQLLFAEELRRRFHERHVNAMAIAVHPGTVKTEV 363
AGIM+ G T+DGF+ F ++ LGHF LT LLLDL+ T +RV+N+SS+ HRFG+ D++ GKGY+ + Y +K+A LLF EL+ R+ +A+A+A HPGT T +
Sbjct: 102 AGIMMVPYGTTVDGFERQFGTNHLGHFALTGLLLDLLLGTPRSRVVNVSSVGHRFGTMDFDNLMYAEGKGYMPARA-------YGRSKLANLLFTYELQHRYEVTGADALAVAAHPGTSHTNL 217
BLAST of mRNA_P-wetherbeei_contig558.1.1 vs. uniprot
Match: A4AEV0_9ACTN (Short chain dehydrogenase n=1 Tax=marine actinobacterium PHSC20C1 TaxID=312284 RepID=A4AEV0_9ACTN) HSP 1 Score: 94.7 bits (234), Expect = 1.050e-20 Identity = 57/122 (46.72%), Postives = 76/122 (62.30%), Query Frame = 1
Query: 1 AGIMLTGR--TIDGFQEVFQSSFLGHFLLTKLLLDLIEATDGARVINLSSLMHRFGSTDWEGAALGSGKGYLDLASMGINP-AGYADAKMAQLLFAEELRRRFHERHVNAMAIAVHPGTVKT 357
AGIM+T TIDGF+ ++ LGHF LT LLDLIE+T GARV++LSS+ HR+G ++ G L + P A Y +K+A LLFA EL+RRF V+A+++A HPGT T
Sbjct: 106 AGIMMTDAQLTIDGFESQLGTNHLGHFALTGRLLDLIESTPGARVVSLSSVAHRWGFMEF---------GNLMFQNGSYTPRAAYGRSKLANLLFAYELQRRFDAAGVDALSVAAHPGTAGT 218
BLAST of mRNA_P-wetherbeei_contig558.1.1 vs. uniprot
Match: A0A835YTY6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTY6_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 1.490e-20 Identity = 53/127 (41.73%), Postives = 77/127 (60.63%), Query Frame = 1
Query: 1 AGIMLTGRTIDGFQEVFQSSFLGHFLLTKLLLDLIEATDGARVINLSSLMHRFGSTD-WEGAALGSGKGYLDLASMGINPAGYADAKMAQLLFAEELRRRFHERHVNAMAIAVHPGTVKTEVWRSAP 378
AG+ G T +G+ F ++ +GH+LLT LL TD AR++N++S+ H++G D WE AA G +G D + YAD+K+A L+ A +LRRRF NA+A AVHPG +T++WR P
Sbjct: 144 AGVSEPGVTSEGYSITFTTNHIGHYLLTDLL---YPETDNARIVNVASVFHQYGDPDKWEEAATGR-RG--DTGPFDVLTHVYADSKLANLMHALDLRRRFTADRCNAVAFAVHPGNCRTDLWRYVP 264
BLAST of mRNA_P-wetherbeei_contig558.1.1 vs. uniprot
Match: UPI001D13C78C (oxidoreductase n=1 Tax=Nocardia sp. DSM 111727 TaxID=2887191 RepID=UPI001D13C78C) HSP 1 Score: 92.0 bits (227), Expect = 8.060e-20 Identity = 55/130 (42.31%), Postives = 77/130 (59.23%), Query Frame = 1
Query: 13 LTGRTIDGFQEVFQSSFLGHFLLTKLLLDLIEATDGARVINLSSLMHRFGSTDWEGAALGSGKGYLDLASMGINPAGYADAKMAQLLFAEELRRRFHERHVNAMAIAVHPGTVKTEVWR-SAPFIVRPFL 399
L+GRT DGF+ F + LGHF T LLLD + +T+GAR++ +SS+ HRFG D++ + G G YA +K+A LLF EL RR + + A+A+A HPG TEV+R S+P+ P L
Sbjct: 106 LSGRTADGFEIQFGVNHLGHFAFTGLLLDRLASTEGARIVTVSSIGHRFGGIDFDEVSSGGGV--------------YARSKLANLLFTYELDRRLAD--LPAVALAAHPGGASTEVFRYSSPWFRLPNL 219
BLAST of mRNA_P-wetherbeei_contig558.1.1 vs. uniprot
Match: UPI001CFD7C93 (oxidoreductase n=1 Tax=Streptomyces bambusae TaxID=1550616 RepID=UPI001CFD7C93) HSP 1 Score: 92.0 bits (227), Expect = 9.310e-20 Identity = 55/133 (41.35%), Postives = 76/133 (57.14%), Query Frame = 1
Query: 1 AGIMLTG--RTIDGFQEVFQSSFLGHFLLTKLLLDLIEATDGARVINLSSLMHRFGSTDWEGAALGSGKGYLDLASMGINP-AGYADAKMAQLLFAEELRRRFHERHVNAMAIAVHPGTVKTEVWRSAPFIVR 390
AG+M T RT+DG + F ++ LGHF LT LLLD + AT GARV+ +SS +HRF D+ G LD A G N Y+ +K+A L+F+ EL RR + +++A HPG T + R P +VR
Sbjct: 103 AGVMWTPYTRTVDGHELQFATNHLGHFALTGLLLDTLRATPGARVVTISSYLHRFARIDFGG---------LD-AEHGYNRYRAYSQSKLANLMFSRELHRRLEQAGDGTLSVAAHPGLAATGLGRELPALVR 225
BLAST of mRNA_P-wetherbeei_contig558.1.1 vs. uniprot
Match: A0A1F3BSB1_9DELT (Short-chain dehydrogenase n=1 Tax=Anaeromyxobacter sp. RBG_16_69_14 TaxID=1797238 RepID=A0A1F3BSB1_9DELT) HSP 1 Score: 91.7 bits (226), Expect = 9.380e-20 Identity = 51/125 (40.80%), Postives = 73/125 (58.40%), Query Frame = 1
Query: 25 TIDGFQEVFQSSFLGHFLLTKLLLDLIEATDGARVINLSSLMHRFGSTDWEGAALGSGKGYLDLASMGINPAGYADAKMAQLLFAEELRRRFHERHVNAMAIAVHPGTVKTEVWRSAPFIVRPFL 399
T+DG ++ F + LG+FLLT LLLDL+E + +RV+N++S+ HR G D+E G GY + + YA +K+A +LF EL RR + V + HPGTV T +W AP+ RP L
Sbjct: 103 TVDGLEQTFAVNHLGYFLLTNLLLDLLERSAPSRVVNVASVAHRRGDIDFENLEYERG-GYAIMKA-------YARSKLANVLFTAELARRLAGKSVTVTCL--HPGTVATNIWSRAPWFARPLL 217
BLAST of mRNA_P-wetherbeei_contig558.1.1 vs. uniprot
Match: UPI001E48BD9E (oxidoreductase n=11 Tax=Salinibacterium TaxID=235888 RepID=UPI001E48BD9E) HSP 1 Score: 91.7 bits (226), Expect = 1.590e-19 Identity = 56/122 (45.90%), Postives = 75/122 (61.48%), Query Frame = 1
Query: 1 AGIMLTGR--TIDGFQEVFQSSFLGHFLLTKLLLDLIEATDGARVINLSSLMHRFGSTDWEGAALGSGKGYLDLASMGINP-AGYADAKMAQLLFAEELRRRFHERHVNAMAIAVHPGTVKT 357
AGIM+T TIDGF+ ++ LGHF LT L+DLIE+T ARV++LSSL HR+G ++ G L + P A Y +K+A LLFA EL+RRF V+A+++A HPGT T
Sbjct: 110 AGIMMTDAQLTIDGFESQLGTNHLGHFALTGHLMDLIESTPAARVVSLSSLAHRWGFMEF---------GNLMFHNGSYTPRAAYGRSKLANLLFAYELQRRFDAAGVDAISVAAHPGTAGT 222 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig558.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig558.1.1 >prot_P-wetherbeei_contig558.1.1 ID=prot_P-wetherbeei_contig558.1.1|Name=mRNA_P-wetherbeei_contig558.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=131bp MLTGRTIDGFQEVFQSSFLGHFLLTKLLLDLIEATDGARVINLSSLMHRFback to top mRNA from alignment at P-wetherbeei_contig558:478..1392- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig558.1.1 ID=mRNA_P-wetherbeei_contig558.1.1|Name=mRNA_P-wetherbeei_contig558.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=915bp|location=Sequence derived from alignment at P-wetherbeei_contig558:478..1392- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig558:478..1392- >mRNA_P-wetherbeei_contig558.1.1 ID=mRNA_P-wetherbeei_contig558.1.1|Name=mRNA_P-wetherbeei_contig558.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=393bp|location=Sequence derived from alignment at P-wetherbeei_contig558:478..1392- (Phaeothamnion wetherbeei SAG_119_79)back to top |