mRNA_P-wetherbeei_contig5565.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5565.1.2 vs. uniprot
Match: A0A836C7G5_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7G5_9STRA) HSP 1 Score: 140 bits (352), Expect = 1.120e-38 Identity = 63/126 (50.00%), Postives = 88/126 (69.84%), Query Frame = 1
Query: 1 MALPRTGPPLQEMPPSGGYPQFDVRSRIRSRGPPGWALFLGSTLVVSYGFYKLMDGNTKRGMDKLEKREARVAIVPLLQAEADVSAVRRQRALLKEEEEIMGHIPGWKVGESVYKTGVWVPKTFDI 378
MA+PR P Q+MPP GGYP+ + +RGPPGWA++ G+ V YGFY L++GN +R EKREAR+ I LQA+AD +R QR ++EEEEIMGH+P WKVG++VYK+G+++ T ++
Sbjct: 1 MAMPRNEIPYQDMPPRGGYPKITIARHTPTRGPPGWAIWAGAAAFVGYGFYGLINGNKRRNAMAREKREARMNIQAFLQADADAQHIRVQRRFMREEEEIMGHVPNWKVGDTVYKSGIYMAPTINL 126
BLAST of mRNA_P-wetherbeei_contig5565.1.2 vs. uniprot
Match: W7U770_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U770_9STRA) HSP 1 Score: 136 bits (342), Expect = 3.280e-37 Identity = 65/122 (53.28%), Postives = 89/122 (72.95%), Query Frame = 1
Query: 1 MALPRTGPPLQEMPPSGGYPQFDVRSRIRSRGPPGWALFLGSTLVVSYGFYKLMDGNTKRGMDKLEKREARVAIVPLLQAEADVSAVRRQRALLKEEEEIMGHIPGWKVGESVYKTGV-WVP 363
MA P GPP+Q++PP GGYP+ ++R+ +RGPP WA++ G+ LVVSYGF ++ NT+R +KRE ++A+ PLLQA+ D+ + RQ+ L EE EIM H+PGWKVGESVYKT V W+P
Sbjct: 1 MATPIGGPPVQDIPPPGGYPKIFYKTRLGNRGPPSWAIWTGAILVVSYGFVQVGRTNTERRFWSDQKREQKLALAPLLQADEDMIWIERQKKALAEEAEIMKHVPGWKVGESVYKTNVTWIP 122
BLAST of mRNA_P-wetherbeei_contig5565.1.2 vs. uniprot
Match: A0A1Z5KQQ9_FISSO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQQ9_FISSO) HSP 1 Score: 124 bits (312), Expect = 1.160e-32 Identity = 57/115 (49.57%), Postives = 84/115 (73.04%), Query Frame = 1
Query: 22 PPLQEMPPSGGYPQFDVRSRIRSRGPPGWALFLGSTLVVSYGFYKLMDGNTKRGMDKLEKREARVAIVPLLQAEADVSAVRRQRALLKEEEEIMGHIPGWKVGESVYKTGVWVPK 366
PP+Q+MPP GG+P+ D+ R R+RGP G ++L S+L ++YGFY++ N R +KLE+R+AR A+ LLQAE D V+R++ ++K+E EIM ++PGWKVGES Y + WVP+
Sbjct: 9 PPIQDMPPPGGFPEIDIVKRARARGPTGAQIWLASSLAIAYGFYRVGKCNKARNGEKLEERKARYAMASLLQAEEDRFYVQREQEIMKKEAEIMKNVPGWKVGESPYSSDRWVPR 123
BLAST of mRNA_P-wetherbeei_contig5565.1.2 vs. uniprot
Match: A0A7S1FYH9_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FYH9_9STRA) HSP 1 Score: 118 bits (296), Expect = 3.550e-30 Identity = 56/119 (47.06%), Postives = 78/119 (65.55%), Query Frame = 1
Query: 10 PRTGPPLQEMPPSGGYPQFDVRSRIRSRGPPGWALFLGSTLVVSYGFYKLMDGNTKRGMDKLEKREARVAIVPLLQAEADVSAVRRQRALLKEEEEIMGHIPGWKVGESVYKTGVWVPK 366
P GP +Q+MPP GGYP+ + +RGPPGWAL+ G+ L++SYGFY++ GN +R +K+ R +V LQAE D +R+ LL+ E EIM + GWKVGES Y +GVW+P+
Sbjct: 6 PNIGPFVQDMPPKGGYPKIRTARHLPNRGPPGWALWSGTALLISYGFYQVGQGNQRRTREKMAILRQREEMVAELQAETDQEYAKREAKLLQVEAEIMKDVKGWKVGESPYFSGVWMPR 124
BLAST of mRNA_P-wetherbeei_contig5565.1.2 vs. uniprot
Match: A0A7S3NKY2_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKY2_9STRA) HSP 1 Score: 113 bits (283), Expect = 6.840e-28 Identity = 55/116 (47.41%), Postives = 77/116 (66.38%), Query Frame = 1
Query: 25 PLQEMPPSGGYPQFDVRSRIRSRGPPGWALFLGSTLVVSYGFYKLMDGNTKRGMDKLEKREARVAIVPLLQAEADVSAVRRQRALLKEEEEIMGHIPGWKVGESVYKT-GVWVPKT 369
P+Q+MPP GGYP+ V + SRGPPGWAL+LG+ + +S+G+Y++ GN +R K EKR AR++ P LQAE DV + +++E +IM + GWKVGESVY W+P T
Sbjct: 41 PIQDMPPEGGYPKITVANENVSRGPPGWALWLGAVVTISFGYYQVGMGNRQRNAAKREKRCARLSFAPYLQAEEDVRYHAHLTSKIEDEAKIMNGVKGWKVGESVYNNRDHWIPPT 156
BLAST of mRNA_P-wetherbeei_contig5565.1.2 vs. uniprot
Match: A0A7S3Q271_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q271_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.010e-27 Identity = 53/122 (43.44%), Postives = 78/122 (63.93%), Query Frame = 1
Query: 10 PRTGPPLQEMPPSGGYPQFDVRSRIRSRGPPGWALFLGSTLVVSYGFYKLMDGNTKRGMDKLEKREARVAIVPLLQAEADVSAVRRQRALLKEEEEIMGHIPGWKVGESVYKTGVWVPKTFD 375
P PPLQ++ P GG+ + DV +RGP GW L+ GS + + YGFY++ N + K +REAR A+ P+LQAEAD + + R+ LL++E EIM + GW+VG+S Y +G W P+T +
Sbjct: 5 PNNLPPLQDVAPKGGFAKVDVLRIFPTRGPKGWQLWSGSAVAIFYGFYQVGQLNQENNRQKYLEREARYAVAPILQAEADRNYLERELKLLQKEAEIMKDVEGWEVGKSTYNSGKWFPRTVN 126
BLAST of mRNA_P-wetherbeei_contig5565.1.2 vs. uniprot
Match: A0A388KNK5_CHABU (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KNK5_CHABU) HSP 1 Score: 110 bits (274), Expect = 7.270e-27 Identity = 55/114 (48.25%), Postives = 74/114 (64.91%), Query Frame = 1
Query: 22 PPLQEMPPSGGYPQFDVRSRIRSRGPPGWALFLGSTLVVSYGFYKLMDGNTKRGMDKLEKREARVAIVPLLQAEADVSAVRRQRALLKEEEEIMGHIPGWKVGESVYKTGVWVP 363
P LQ+ PP GG+P +I + GP G +F + V+SYG Y++ GN R K EK EAR+AI+PL+QAE DV + ++ L EEE+IM ++PGWKVGESVY +G W P
Sbjct: 19 PVLQDGPPPGGFPAIRYARKIPNTGPSGVVVFSIAAAVISYGMYQVGQGNLHRRALKKEKMEARMAILPLIQAEEDVRYAKARQKALAEEEKIMQNVPGWKVGESVYNSGRWAP 132
BLAST of mRNA_P-wetherbeei_contig5565.1.2 vs. uniprot
Match: A0A0D6QRQ9_ARACU (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6QRQ9_ARACU) HSP 1 Score: 109 bits (272), Expect = 1.530e-26 Identity = 58/117 (49.57%), Postives = 74/117 (63.25%), Query Frame = 1
Query: 13 RTGPPLQEMPPSGGYPQFDVRSRIRSRGPPGWALFLGSTLVVSYGFYKLMDGNTKRGMDKLEKREARVAIVPLLQAEADVSAVRRQRALLKEEEEIMGHIPGWKVGESVYKTGVWVP 363
R P LQ+ PP GG+P RI ++GP A+FL S ++SYG Y++ GN R K EK AR AI+PLLQAE D V + L+EE EIM ++PGWKVGESVY +G W+P
Sbjct: 16 REMPVLQDGPPPGGFPPVRYTRRIPNKGPGAVAVFLASFGIISYGMYQIGQGNKYRSRLKREKFAARSAILPLLQAEEDERFVTAWKEYLEEEAEIMKNVPGWKVGESVYNSGKWMP 132
BLAST of mRNA_P-wetherbeei_contig5565.1.2 vs. uniprot
Match: B7G3W2_PHATC (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G3W2_PHATC) HSP 1 Score: 105 bits (262), Expect = 3.660e-25 Identity = 49/118 (41.53%), Postives = 76/118 (64.41%), Query Frame = 1
Query: 16 TGPPLQEMPPSGGYPQFDVRSRIRSRGPPGWALFLGSTLVVSYGFYKLMDGNTKRGMDKLEKREARVAIVPLLQAEADVSAVRRQRALLKEEEEIMGHIPGWKVGESVY-KTGVWVPK 366
+ PP+Q+MPP GG+P D++ R+RGP G ++ ++L ++YG Y+L N +R + E+R++R A+ P+LQAE D R+ + +E EIM ++ GWK GESVY T WVP+
Sbjct: 8 SAPPIQDMPPPGGFPAVDLKRTARARGPSGGTIWAVASLSIAYGMYRLGQQNRERATEMFEERKSRYAVAPILQAEEDKWYAEREADITAKEAEIMKNVSGWKAGESVYHSTNRWVPR 125
BLAST of mRNA_P-wetherbeei_contig5565.1.2 vs. uniprot
Match: A0A2I0WNF5_9ASPA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=2 Tax=Epidendroideae TaxID=158332 RepID=A0A2I0WNF5_9ASPA) HSP 1 Score: 105 bits (262), Expect = 4.460e-25 Identity = 55/114 (48.25%), Postives = 73/114 (64.04%), Query Frame = 1
Query: 22 PPLQEMPPSGGYPQFDVRSRIRSRGPPGWALFLGSTLVVSYGFYKLMDGNTKRGMDKLEKREARVAIVPLLQAEADVSAVRRQRALLKEEEEIMGHIPGWKVGESVYKTGVWVP 363
P LQ+ PP GG+P RI ++GP A+FL + V +YG Y++ GN R + K EK AR AI+P+LQAE D V+ + L+EE +IM +PGWKVGESVY +G WVP
Sbjct: 19 PVLQDGPPPGGFPPVRYARRIPTKGPGAVAIFLTAFGVFAYGMYQIGQGNKIRRVQKEEKYAARRAIIPVLQAEEDERFVKEWKKYLEEEAKIMKDVPGWKVGESVYNSGRWVP 132 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5565.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5565.1.2 >prot_P-wetherbeei_contig5565.1.2 ID=prot_P-wetherbeei_contig5565.1.2|Name=mRNA_P-wetherbeei_contig5565.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=128bp MALPRTGPPLQEMPPSGGYPQFDVRSRIRSRGPPGWALFLGSTLVVSYGFback to top mRNA from alignment at P-wetherbeei_contig5565:568..1956+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5565.1.2 ID=mRNA_P-wetherbeei_contig5565.1.2|Name=mRNA_P-wetherbeei_contig5565.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1389bp|location=Sequence derived from alignment at P-wetherbeei_contig5565:568..1956+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5565:568..1956+ >mRNA_P-wetherbeei_contig5565.1.2 ID=mRNA_P-wetherbeei_contig5565.1.2|Name=mRNA_P-wetherbeei_contig5565.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=384bp|location=Sequence derived from alignment at P-wetherbeei_contig5565:568..1956+ (Phaeothamnion wetherbeei SAG_119_79)back to top |