mRNA_P-wetherbeei_contig55563.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig55563.1.1 vs. uniprot
Match: A0A7C2LU04_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2LU04_9HYPH) HSP 1 Score: 142 bits (358), Expect = 1.030e-40 Identity = 74/148 (50.00%), Postives = 96/148 (64.86%), Query Frame = 1
Query: 1 MTLRRDHIAGIGLIGLAVAVLALGQELPFGTSASPGPGMLPVLCAGLMLALAIVVLLRAGESPPFSEIAWDDIPHALLVIVAASGAAALYTTLGFPITFGLLLFGLTYGVERMPLATTAAVTAVMTGGAYWLLGTLLKTPMPLGIFGF 444
MT+RRDH+AG +IG +LA+ +LPFGT ASPG GMLP ++ L +V++ AG SP +E++W D+PHAL V+ A+GAAALYT LGF T LLL LT+ VE PL A A +TG A+ L TLL+TP+P G F
Sbjct: 1 MTVRRDHVAGGAVIGAGAVLLAVSVDLPFGTLASPGAGMLPKAVIAAIIGLGLVIVAGAGASPRLAEMSWGDLPHALRVLAVAAGAAALYTVLGFIPTVFLLLLALTFAVEGKPLLNAALFAAGVTGLAFALFSTLLRTPLPRGSVWF 148
BLAST of mRNA_P-wetherbeei_contig55563.1.1 vs. uniprot
Match: A0A537RVV8_9PROT (Tripartite tricarboxylate transporter TctB family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537RVV8_9PROT) HSP 1 Score: 140 bits (352), Expect = 2.990e-39 Identity = 71/146 (48.63%), Postives = 92/146 (63.01%), Query Frame = 1
Query: 7 LRRDHIAGIGLIGLAVAVLALGQELPFGTSASPGPGMLPVLCAGLMLALAIVVLLRAGESPPFSEIAWDDIPHALLVIVAASGAAALYTTLGFPITFGLLLFGLTYGVERMPLATTAAVTAVMTGGAYWLLGTLLKTPMPLGIFGF 444
LRRDH+AG + + V A+ +LP G+ A PG GM+P L LMLA ++VLLRAGESPP +E++W D+PHA VI + ALY LGF T LLLF L + VER P+ A + +T AY L GTLLK+P+P G+ F
Sbjct: 46 LRRDHLAGGVFVAAGLLVFAVSGDLPVGSMAMPGAGMMPKLVTSLMLAFGVIVLLRAGESPPLAEVSWADLPHAARVIAVTAAGIALYEPLGFLATMSLLLFSLVFIVERKPILPAAVFSVGVTVFAYVLFGTLLKSPLPRGLLWF 191
BLAST of mRNA_P-wetherbeei_contig55563.1.1 vs. uniprot
Match: A0A3N5MYD2_9PROT (Tripartite tricarboxylate transporter TctB family protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5MYD2_9PROT) HSP 1 Score: 132 bits (333), Expect = 1.410e-36 Identity = 68/139 (48.92%), Postives = 89/139 (64.03%), Query Frame = 1
Query: 10 RRDHIAGIGLIGLAVAVLALGQELPFGTSASPGPGMLPVLCAGLMLALAIVVLLRAGESPPFSEIAWDDIPHALLVIVAASGAAALYTTLGFPITFGLLLFGLTYGVERMPLATTAAVTAVMTGGAYWLLGTLLKTPMP 426
RRDH+AG +GL + + AL ELPFG+ ASPG GMLP L LM ++++RA +SPP + + W D HA V+ ++ A LYT +GF T LLLF L Y VER L AAV+ +T GAY+L GTLLK+P+P
Sbjct: 31 RRDHVAGGAFVGLGLLLFALSDELPFGSLASPGAGMLPKLVLALMTVFGAILVVRASDSPPIATLDWSDFGHAATVVGVSAVAIGLYTVIGFVPTISLLLFVLLYVVERRSLWRAAAVSIGITLGAYFLFGTLLKSPLP 169
BLAST of mRNA_P-wetherbeei_contig55563.1.1 vs. uniprot
Match: A0A3N5NBA5_9HYPH (Tripartite tricarboxylate transporter TctB family protein (Fragment) n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A3N5NBA5_9HYPH) HSP 1 Score: 125 bits (313), Expect = 7.220e-34 Identity = 72/144 (50.00%), Postives = 85/144 (59.03%), Query Frame = 1
Query: 1 MTLRRDHIAGIGLIGLAVAVLALGQELPFGTSASPGPGMLPVLCAGLMLALAIVVLLRAGESPPFSEIAWDDIPHALLVIVAASGAAALYTTLGFPITFGLLLFGLTYGVERMPLATTAAVTAVMTGGAYWLLGTLLKTPMPLG 432
M LRRDHIAG + VLAL +LPFGT ASPG GMLP + A LM+ A +LL AG SPP E+AW + HA+ +I + A ALYT LGF T LLL LT VER PL A + T AY + TLL P+P G
Sbjct: 2 MILRRDHIAGGAFVAGGALVLALSGDLPFGTLASPGAGMLPTVVAVLMMIFAATLLLAAGASPPIGEVAWGNAAHAMRLIGVTAAAIALYTWLGFIATILLLLLVLTILVERKPLLHAVAFSIGATLLAYLVFSTLLNAPLPRG 145
BLAST of mRNA_P-wetherbeei_contig55563.1.1 vs. uniprot
Match: A0A345ZWG3_9HYPH (Tripartite tricarboxylate transporter TctB family protein n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A345ZWG3_9HYPH) HSP 1 Score: 124 bits (310), Expect = 1.940e-33 Identity = 67/148 (45.27%), Postives = 85/148 (57.43%), Query Frame = 1
Query: 1 MTLRRDHIAGIGLIGLAVAVLALGQELPFGTSASPGPGMLPVLCAGLMLALAIVVLLRAGESPPFSEIAWDDIPHALLVIVAASGAAALYTTLGFPITFGLLLFGLTYGVERMPLATTAAVTAVMTGGAYWLLGTLLKTPMPLGIFGF 444
MTLR DH+AG I ++AL ELPFG + PG G LP + A L + + +++RAGESPPF+EIAW D HALL+ + A ALYT LGF +T ++ L GVER P AA T + Y LLKTP+P G F
Sbjct: 1 MTLRADHVAGAAFILFGALIIALSGELPFGQLSMPGSGFLPYIVAVLTMLFGLALIVRAGESPPFAEIAWSDGKHALLLTTVTAIAIALYTQLGFVVTMSAMMLILLIGVERRPAPRAAAYTFGVVLVIYLAFEYLLKTPLPSGPLTF 148
BLAST of mRNA_P-wetherbeei_contig55563.1.1 vs. uniprot
Match: UPI00180ACB07 (Tripartite tricarboxylate transporter TctB family protein n=1 Tax=Rhodoplanes sp. TaxID=1968906 RepID=UPI00180ACB07) HSP 1 Score: 114 bits (286), Expect = 8.020e-30 Identity = 64/142 (45.07%), Postives = 85/142 (59.86%), Query Frame = 1
Query: 1 MTLRRDHIAGIGLIGLAVAVLALGQELPFGTSASPGPGMLPVLCAGLMLALAIVVLLRAGESPPFSEIAWDDIPHALLVIVAASGAAALYTTLGFPITFGLLLFGLTYGVERMPLATTAAVTAVMTGGAYWLLGTLLKTPMP 426
M L+RD +AG +GL A+ A +LP G+ A PG GM+P++ GL++ L V+L+R P S W D HA+ V+VA + A ALYT LGF IT LLLFGL VER + AA + +T A+ L LLKTP+P
Sbjct: 1 MRLKRDTVAGGAFVGLGAALWASSGDLPVGSLAMPGAGMVPMIAIGLVMVLGGVLLVRGTAGPSLSADHWSDADHAIRVVVATAIATALYTRLGFLITVPLLLFGLVGLVERRNIVAAAAFSIGVTAVAWLLFAMLLKTPLP 142
BLAST of mRNA_P-wetherbeei_contig55563.1.1 vs. uniprot
Match: A0A327K7Y9_9HYPH (Uncharacterized protein n=1 Tax=Rhodoplanes elegans TaxID=29408 RepID=A0A327K7Y9_9HYPH) HSP 1 Score: 111 bits (277), Expect = 1.890e-28 Identity = 62/144 (43.06%), Postives = 82/144 (56.94%), Query Frame = 1
Query: 1 MTLRRDHIAGIGLIGLAVAVLALGQELPFGTSASPGPGMLPVLCAGLMLALAIVVLLRAGESPPFSEIAWDDIPHALLVIVAASGAAALYTTLGFPITFGLLLFGLTYGVERMPLATTAAVTAVMTGGAYWLLGTLLKTPMPLG 432
MTLRRD +AG + LA + L +LP G+ A PG GM+P++ GL+ V+L+R +PP + W D HA+ VIV A A ALYT LG IT LLLFGL VER + A +T + + G LLK+P+P G
Sbjct: 1 MTLRRDTVAGAAFVVLAGLLWWLSDDLPVGSLAMPGAGMMPMIAIGLVALFGAVLLVRGASTPPITAAHWSDADHAVRVIVFAELATALYTRLGVLITMSLLLFGLVALVERRGILRAAVFAVGVTVTLWAVFGMLLKSPLPTG 144
BLAST of mRNA_P-wetherbeei_contig55563.1.1 vs. uniprot
Match: A0A327KY39_9HYPH (Uncharacterized protein n=1 Tax=Rhodoplanes roseus TaxID=29409 RepID=A0A327KY39_9HYPH) HSP 1 Score: 98.6 bits (244), Expect = 1.780e-23 Identity = 55/142 (38.73%), Postives = 78/142 (54.93%), Query Frame = 1
Query: 1 MTLRRDHIAGIGLIGLAVAVLALGQELPFGTSASPGPGMLPVLCAGLMLALAIVVLLRAGESPPFSEIAWDDIPHALLVIVAASGAAALYTTLGFPITFGLLLFGLTYGVERMPLATTAAVTAVMTGGAYWLLGTLLKTPMP 426
M +RRD +AG+ ++ A+ A +LP G+ A PG GM+P++ L++ V++ R P + W D HAL VIVA + A LYT LGF IT LLLFGL VER + A + + + L G +LK P+P
Sbjct: 1 MKVRRDVVAGLAVLAGGAALWASSGDLPVGSLAMPGAGMMPMIAIALVMVFGAVLVFRGTAGPRLAADHWSDADHALRVIVATAVATFLYTRLGFLITMSLLLFGLVGLVERRRVLPAALFSLGVALATWLLFGMVLKAPLP 142
BLAST of mRNA_P-wetherbeei_contig55563.1.1 vs. uniprot
Match: A0A1F7PUL1_9BACT (Uncharacterized protein n=1 Tax=Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_69_21 TaxID=1802108 RepID=A0A1F7PUL1_9BACT) HSP 1 Score: 72.8 bits (177), Expect = 2.400e-13 Identity = 47/146 (32.19%), Postives = 71/146 (48.63%), Query Frame = 1
Query: 16 DHIAGIGLIGLAVAVLALGQELPFGTSASPGPGMLPVLCAGLMLALAIVVLLRAGESPPFSEIAWDDIPHALLVIVAASGAAALYTTLGFPITFGLLLFGLTYGVERMPLATTAAVTAVMTGGAYWL---LGTLLKTPMPLGIFGF 444
D +G+ L+ +AVL + P GT PGP LPV+ AG+++ LA++VL+ SP + W + H ++ AA LG+ +T ++L L VER A ++ +YW+ LG LL P G FGF
Sbjct: 18 DRASGLILVLFGIAVLWESRAFPLGTLGRPGPAFLPVVLAGVLVGLALLVLVFGRRSPRLRSLEWSEAGHVAAILSGCGFAALALERLGYRLTMIVVLAFLLGVVERSRPAVMVSIAVGFALVSYWVFRRLGVLL----PEGPFGF 159
BLAST of mRNA_P-wetherbeei_contig55563.1.1 vs. uniprot
Match: A0A7W6H9A2_9HYPH (Putative membrane protein YqjE n=1 Tax=Aureimonas pseudogalii TaxID=1744844 RepID=A0A7W6H9A2_9HYPH) HSP 1 Score: 63.5 bits (153), Expect = 7.320e-10 Identity = 48/142 (33.80%), Postives = 72/142 (50.70%), Query Frame = 1
Query: 16 DHIAGIGLIGLAVAVLALGQELPFGTSASPGPGMLPVLCAGLMLALAIVVLLRAGESPPFSEIAWDDIPHALLVIVAASGAAALYTTLGFPI-TFGLLLFGLTYGVERMPLATTAAVTAVMTGGAYWLLGTLLKTPMPLGIF 438
D +AG+ LIG+ L G+ L FGT A GPG LP + GL++A+ I VLL+ G P + ++ ++++VA +G A TLGF + T LL+ G + + A TAV+T + L MP+ F
Sbjct: 14 DLLAGVLLIGIGALGLWAGRSLAFGTPAMMGPGFLPRVMCGLLIAIGIFVLLK-GVVKPAERMGLVNVKPLVILVVAIAGFAWASETLGFVVATVWLLVIG-SLADQESRWKEIAISTAVLTAAGALVFIEGLGVQMPIWPF 153 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig55563.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig55563.1.1 >prot_P-wetherbeei_contig55563.1.1 ID=prot_P-wetherbeei_contig55563.1.1|Name=mRNA_P-wetherbeei_contig55563.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=149bp MTLRRDHIAGIGLIGLAVAVLALGQELPFGTSASPGPGMLPVLCAGLMLAback to top mRNA from alignment at P-wetherbeei_contig55563:6..452+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig55563.1.1 ID=mRNA_P-wetherbeei_contig55563.1.1|Name=mRNA_P-wetherbeei_contig55563.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=447bp|location=Sequence derived from alignment at P-wetherbeei_contig55563:6..452+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig55563:6..452+ >mRNA_P-wetherbeei_contig55563.1.1 ID=mRNA_P-wetherbeei_contig55563.1.1|Name=mRNA_P-wetherbeei_contig55563.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=447bp|location=Sequence derived from alignment at P-wetherbeei_contig55563:6..452+ (Phaeothamnion wetherbeei SAG_119_79)back to top |