mRNA_P-wetherbeei_contig5546.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5546.1.1
Unique NamemRNA_P-wetherbeei_contig5546.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5546.1.1 vs. uniprot
Match: A0A6T8GSH0_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8GSH0_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 6.830e-17
Identity = 41/63 (65.08%), Postives = 47/63 (74.60%), Query Frame = 1
Query:    1 SRFREDFEELAVIGGGSFGTVYKVRSRLDGALYAVKCTRRCIKGARDRDVMLKEVHALAGLTD 189
            SRF EDFEE+  +G GSFG VYK  S+LDG +YAVK  RR  KG  DRD MLKEV+ALA L+D
Sbjct:  180 SRFAEDFEEIGKLGTGSFGMVYKCLSKLDGCMYAVKVARREAKGVADRDRMLKEVYALAALSD 242          
BLAST of mRNA_P-wetherbeei_contig5546.1.1 vs. uniprot
Match: A0A6H5K0E1_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E1_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 1.340e-16
Identity = 40/62 (64.52%), Postives = 45/62 (72.58%), Query Frame = 1
Query:    4 RFREDFEELAVIGGGSFGTVYKVRSRLDGALYAVKCTRRCIKGARDRDVMLKEVHALAGLTD 189
            RF  DFE   +IG G FGTVYKVRSR+DG LYAVKC+RR  KG  DR  ML EV+ALA + D
Sbjct:  491 RFATDFEVKEIIGAGGFGTVYKVRSRVDGCLYAVKCSRRRFKGETDRQNMLMEVYALAAVCD 552          
BLAST of mRNA_P-wetherbeei_contig5546.1.1 vs. uniprot
Match: A0A7S2S4J0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S4J0_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 4.180e-16
Identity = 36/61 (59.02%), Postives = 45/61 (73.77%), Query Frame = 1
Query:    1 SRFREDFEELAVIGGGSFGTVYKVRSRLDGALYAVKCTRRCIKGARDRDVMLKEVHALAGL 183
            SRF  DF+ L+++G GSFGTV K  SRLDG LYA+K TRR I+G  ++   LKEVHAL+ L
Sbjct:    9 SRFENDFQTLSILGNGSFGTVLKCISRLDGCLYAIKTTRRSIRGNSEKHKFLKEVHALSAL 69          
BLAST of mRNA_P-wetherbeei_contig5546.1.1 vs. uniprot
Match: A0A2R5G011_9STRA (Wee1-like protein kinase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G011_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 2.210e-15
Identity = 36/61 (59.02%), Postives = 49/61 (80.33%), Query Frame = 1
Query:    1 SRFREDFEELAVIGGGSFGTVYKVRSRLDGALYAVKCTRRCIKGARDRDVMLKEVHALAGL 183
            SRF+E+FEE+ ++G G+FGTV+K R+RLDG LYAVK T++  KG  DR+ +LKEV AL+ L
Sbjct:  433 SRFKEEFEEVGILGTGTFGTVFKCRNRLDGCLYAVKVTKQRFKGRADRERVLKEVFALSAL 493          
BLAST of mRNA_P-wetherbeei_contig5546.1.1 vs. uniprot
Match: A0A7R9ZD08_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZD08_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 2.590e-15
Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 1
Query:    1 SRFREDFEELAVIGGGSFGTVYKVRSRLDGALYAVKCTRRCIKGARDRDVMLKEVHALAGL 183
            SRF +DF+ +  +G GSFGTV+KV SRLDG LYAVK  +R ++G  DR   LKEVHALA L
Sbjct:   75 SRFEQDFQVVGQLGTGSFGTVHKVISRLDGCLYAVKVMKRPVRGELDRRQTLKEVHALAAL 135          
BLAST of mRNA_P-wetherbeei_contig5546.1.1 vs. uniprot
Match: A0A7S4J8G5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J8G5_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 2.900e-15
Identity = 38/62 (61.29%), Postives = 48/62 (77.42%), Query Frame = 1
Query:    4 RFREDFEELAVIGGGSFGTVYKVRSRLDGALYAVKCTRRCIKGARDRDVMLKEVHALAGLTD 189
            RF EDFE L  +G GSFGTV++V+SRLD  LYAVK +RR ++G  DR  ML+EV+ALA L+D
Sbjct:  147 RFDEDFEILGTLGRGSFGTVHRVKSRLDSQLYAVKISRRTVRGEGDRRRMLREVYALAALSD 208          
BLAST of mRNA_P-wetherbeei_contig5546.1.1 vs. uniprot
Match: A0A7S2SIK3_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SIK3_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 5.610e-15
Identity = 36/61 (59.02%), Postives = 48/61 (78.69%), Query Frame = 1
Query:    1 SRFREDFEELAVIGGGSFGTVYKVRSRLDGALYAVKCTRRCIKGARDRDVMLKEVHALAGL 183
            SRF+E+FE   V+GGG+FGTVY  ++RLDG +YAVK T++  KG  DR+ +LKEV+ALA L
Sbjct:  288 SRFQEEFETRGVLGGGTFGTVYLCKNRLDGCMYAVKVTKQRFKGKADRERVLKEVYALAAL 348          
BLAST of mRNA_P-wetherbeei_contig5546.1.1 vs. uniprot
Match: A0A7S2USI9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2USI9_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 8.820e-15
Identity = 36/61 (59.02%), Postives = 46/61 (75.41%), Query Frame = 1
Query:    1 SRFREDFEELAVIGGGSFGTVYKVRSRLDGALYAVKCTRRCIKGARDRDVMLKEVHALAGL 183
            SR+  DF+E+ V+G GSFG VYKV SRLDG  YAVK  +R  +G+ D++ MLKEV+ALA L
Sbjct:   86 SRYLNDFQEVGVLGCGSFGNVYKVISRLDGCFYAVKVVKRAARGSNDKEHMLKEVYALAAL 146          
BLAST of mRNA_P-wetherbeei_contig5546.1.1 vs. uniprot
Match: F0Y8Z4_AURAN (Protein kinase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8Z4_AURAN)

HSP 1 Score: 76.3 bits (186), Expect = 1.030e-14
Identity = 38/62 (61.29%), Postives = 45/62 (72.58%), Query Frame = 1
Query:    1 SRFREDFEELAVIGGGSFGTVYKVRSRLDGALYAVKCTRRCIKGARDRDVMLKEVHALAGLT 186
            SRFR DFE +  +GGGSFGTV+KV+SR+DG  YAVK T+   KG   RD  LKEV ALA L+
Sbjct:  192 SRFRHDFEVVKYVGGGSFGTVHKVKSRIDGCHYAVKATKHQFKGQLHRDRTLKEVFALAALS 253          
BLAST of mRNA_P-wetherbeei_contig5546.1.1 vs. uniprot
Match: A0A7S1ZD56_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZD56_TRICV)

HSP 1 Score: 75.5 bits (184), Expect = 1.960e-14
Identity = 38/61 (62.30%), Postives = 45/61 (73.77%), Query Frame = 1
Query:    1 SRFREDFEELAVIGGGSFGTVYKVRSRLDGALYAVKCTRRCIKGARDRDVMLKEVHALAGL 183
            SRF EDF+ +  +G GSFGTV+KV SRLDG LYAVK  +R ++G  DR   LKEVHALA L
Sbjct:  350 SRFEEDFQVVGQLGTGSFGTVHKVISRLDGCLYAVKVMKRPVRGELDRRQTLKEVHALAAL 410          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5546.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6T8GSH0_9STRA6.830e-1765.08Hypothetical protein n=2 Tax=Proboscia inermis Tax... [more]
A0A6H5K0E1_9PHAE1.340e-1664.52Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A7S2S4J0_9STRA4.180e-1659.02Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A2R5G011_9STRA2.210e-1559.02Wee1-like protein kinase n=1 Tax=Hondaea fermental... [more]
A0A7R9ZD08_9STRA2.590e-1560.66Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S4J8G5_9STRA2.900e-1561.29Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S2SIK3_9STRA5.610e-1559.02Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S2USI9_9STRA8.820e-1559.02Hypothetical protein n=1 Tax=Attheya septentrional... [more]
F0Y8Z4_AURAN1.030e-1461.29Protein kinase domain-containing protein n=1 Tax=A... [more]
A0A7S1ZD56_TRICV1.960e-1462.30Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5546contigP-wetherbeei_contig5546:13..201 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G343
PFAMsPkinase
Model size189
Max annot lvl2759|Eukaryota
KEGG koko:K06632,ko:K06633
KEGG Pathwayko04110,ko04114,ko04914,map04110,map04114,map04914
KEGG ModuleM00693
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.09e-17
EggNOG OGsKOG0601@1|root,KOG0601@2759|Eukaryota
EC2.7.11.1
Descriptionprotein kinase activity
Cds size189
COG categoryT
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko01009,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186826.2975821-CDS-P-wetherbeei_contig5546:12..2011683186826.2975821-CDS-P-wetherbeei_contig5546:12..201Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5546 13..201 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5546.1.1prot_P-wetherbeei_contig5546.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5546 13..201 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5546.1.1

>prot_P-wetherbeei_contig5546.1.1 ID=prot_P-wetherbeei_contig5546.1.1|Name=mRNA_P-wetherbeei_contig5546.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=63bp
SRFREDFEELAVIGGGSFGTVYKVRSRLDGALYAVKCTRRCIKGARDRDV
MLKEVHALAGLTD
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mRNA from alignment at P-wetherbeei_contig5546:13..201-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5546.1.1 ID=mRNA_P-wetherbeei_contig5546.1.1|Name=mRNA_P-wetherbeei_contig5546.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=189bp|location=Sequence derived from alignment at P-wetherbeei_contig5546:13..201- (Phaeothamnion wetherbeei SAG_119_79)
AGCCGCTTCCGGGAGGACTTTGAGGAGTTGGCGGTCATCGGCGGCGGCAG CTTCGGAACGGTGTACAAGGTGCGCTCCCGCCTGGACGGCGCGCTGTACG CCGTCAAGTGCACGCGGCGGTGCATCAAGGGCGCCCGGGACCGCGACGTC ATGCTGAAAGAGGTGCACGCGCTGGCAGGGCTGACAGAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5546:13..201-

>mRNA_P-wetherbeei_contig5546.1.1 ID=mRNA_P-wetherbeei_contig5546.1.1|Name=mRNA_P-wetherbeei_contig5546.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=189bp|location=Sequence derived from alignment at P-wetherbeei_contig5546:13..201- (Phaeothamnion wetherbeei SAG_119_79)
AGCCGCTTCCGGGAGGACTTTGAGGAGTTGGCGGTCATCGGCGGCGGCAG
CTTCGGAACGGTGTACAAGGTGCGCTCCCGCCTGGACGGCGCGCTGTACG
CCGTCAAGTGCACGCGGCGGTGCATCAAGGGCGCCCGGGACCGCGACGTC
ATGCTGAAAGAGGTGCACGCGCTGGCAGGGCTGACAGAC
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