mRNA_P-wetherbeei_contig55439.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig55439.1.1 vs. uniprot
Match: A0A7C2YD93_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2YD93_9PROT) HSP 1 Score: 84.7 bits (208), Expect = 1.270e-19 Identity = 46/64 (71.88%), Postives = 57/64 (89.06%), Query Frame = 1
Query: 49 AADTGA-VTREVIPGSELMTHQERERYRRRLRGAKSPADAQQIQGEHVRQMRERARLRGLRLPE 237
AADT A V RE+IPGSELMT QERERYR+R+RGAKS A+ ++I+ +HV+QM+ERARLRGLRLP+
Sbjct: 21 AADTTAPVKREIIPGSELMTTQERERYRQRMRGAKSAAEQKRIRDDHVKQMQERARLRGLRLPD 84
BLAST of mRNA_P-wetherbeei_contig55439.1.1 vs. uniprot
Match: A0A1F4ADL5_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 TaxID=1797482 RepID=A0A1F4ADL5_9PROT) HSP 1 Score: 72.8 bits (177), Expect = 5.240e-15 Identity = 41/73 (56.16%), Postives = 52/73 (71.23%), Query Frame = 1
Query: 19 GISLPARAEQAADTGAVTREVIPGSELMTHQERERYRRRLRGAKSPADAQQIQGEHVRQMRERARLRGLRLPE 237
GI+L A + + RE+IPGSELMT QERERYR+R+R AKS + + + EH +QM+ERARLRGLRL E
Sbjct: 6 GIALAAE-QSGTSRPQMKREIIPGSELMTPQERERYRQRMRSAKSDDERNRYRAEHTKQMQERARLRGLRLAE 77
BLAST of mRNA_P-wetherbeei_contig55439.1.1 vs. uniprot
Match: A0A3N5WPQ2_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5WPQ2_9PROT) HSP 1 Score: 70.9 bits (172), Expect = 4.780e-14 Identity = 37/78 (47.44%), Postives = 55/78 (70.51%), Query Frame = 1
Query: 1 IFVMIFGISLPARAEQAADTGA-VTREVIPGSELMTHQERERYRRRLRGAKSPADAQQIQGEHVRQMRERARLRGLRL 231
I + G +LPA A+ V RE+IPGSELMT +ERE YR+R+RGA++P + ++++ EHV+ M ER R+RGL++
Sbjct: 13 ITATVIGGALPAAVAAPAEPAPPVQREIIPGSELMTSREREAYRQRMRGARTPEERERLRAEHVKAMEERGRMRGLQV 90
BLAST of mRNA_P-wetherbeei_contig55439.1.1 vs. uniprot
Match: UPI000A32465B (hypothetical protein n=2 Tax=Methylocaldum TaxID=73778 RepID=UPI000A32465B) HSP 1 Score: 65.1 bits (157), Expect = 1.400e-11 Identity = 34/73 (46.58%), Postives = 51/73 (69.86%), Query Frame = 1
Query: 40 AEQAADTGAVTREVIPGSELMTHQERERYRRRLRGAKSPADAQQIQGEHVRQMRERARLRGLRLPEEKPAGEG 258
A++ + + T+E I G +LMT QER YR R+RGAK+ + +QI+ EH +M+ERA+ RG+ +P+E PAG G
Sbjct: 24 AQERSQQRSQTQEQIYGKQLMTEQERAEYRDRMRGAKTAEEREQIRKEHHERMKERAKERGVTIPDEPPAGRG 96
BLAST of mRNA_P-wetherbeei_contig55439.1.1 vs. uniprot
Match: UPI000F5BD1E7 (hypothetical protein n=1 Tax=Sulfuriferula multivorans TaxID=1559896 RepID=UPI000F5BD1E7) HSP 1 Score: 60.1 bits (144), Expect = 1.100e-9 Identity = 34/80 (42.50%), Postives = 53/80 (66.25%), Query Frame = 1
Query: 22 ISLPARAEQAADTG-AVTREVIPGSELMTHQERERYRRRLRGAKSPADAQQIQGEHVRQMRERARLRGLRLPEEKPAGEG 258
++ A+A++ G A +E + GS+LMT QER YR R+R AK+ + +QI+ EH ++M+ERA+ RG+ LP+ PA G
Sbjct: 24 VTKQAQAQEPMQQGQARNQEQVYGSQLMTRQERAEYRNRMRNAKTEQEREQIRSEHHKRMQERAKQRGVTLPDSPPARGG 103
BLAST of mRNA_P-wetherbeei_contig55439.1.1 vs. uniprot
Match: UPI001BB419BA (hypothetical protein n=1 Tax=Ferrigenium kumadai TaxID=1682490 RepID=UPI001BB419BA) HSP 1 Score: 60.5 bits (145), Expect = 1.100e-9 Identity = 31/62 (50.00%), Postives = 45/62 (72.58%), Query Frame = 1
Query: 73 REVIPGSELMTHQERERYRRRLRGAKSPADAQQIQGEHVRQMRERARLRGLRLPEEKPAGEG 258
+E I GS++MT QER Y R+R AK+ + +QI+ EH +M+ERA+ RG+ LP+E PAG+G
Sbjct: 43 KERIYGSQMMTRQERAEYHARMRAAKTAEEREQIRKEHHERMKERAKQRGVTLPDEPPAGDG 104
BLAST of mRNA_P-wetherbeei_contig55439.1.1 vs. uniprot
Match: A0A6F8VB22_9PROT (Uncharacterized protein n=1 Tax=Sulfurimicrobium lacus TaxID=2715678 RepID=A0A6F8VB22_9PROT) HSP 1 Score: 58.9 bits (141), Expect = 4.550e-9 Identity = 34/76 (44.74%), Postives = 48/76 (63.16%), Query Frame = 1
Query: 31 PARAEQAADTGAVTREVIPGSELMTHQERERYRRRLRGAKSPADAQQIQGEHVRQMRERARLRGLRLPEEKPAGEG 258
PA A A R+ I GS+LMT QER YR ++R AK+ + +QI+ EH +M+ERA+ +G+ LP+ PAG G
Sbjct: 26 PAAAPAPAQQQMQPRDQIYGSQLMTTQERMEYRTKMRAAKTQQEREQIRAEHHARMQERAKEKGMTLPDMPPAGMG 101
BLAST of mRNA_P-wetherbeei_contig55439.1.1 vs. uniprot
Match: Q1K235_DESA6 (Uncharacterized protein n=1 Tax=Desulfuromonas acetoxidans (strain DSM 684 / 11070) TaxID=281689 RepID=Q1K235_DESA6) HSP 1 Score: 58.5 bits (140), Expect = 5.440e-9 Identity = 34/70 (48.57%), Postives = 46/70 (65.71%), Query Frame = 1
Query: 40 AEQAADTGAVTREVIPGSELMTHQERERYRRRLRGAKSPADAQQIQGEHVRQMRERARLRGLRLPEEKPA 249
A+ AA T ++ I GS+LMT QER +R R+R AK+ Q+I+ EH M+ERA+ RG+ LPEE PA
Sbjct: 29 AQDAAQTQMQQQQKIYGSQLMTQQERMEFRARMRNAKTAEQRQKIRQEHHATMQERAKQRGVSLPEEPPA 98
BLAST of mRNA_P-wetherbeei_contig55439.1.1 vs. uniprot
Match: A0A1G3TGB2_9PROT (Uncharacterized protein n=1 Tax=Sulfurimonas sp. RIFCSPLOWO2_12_36_12 TaxID=1802253 RepID=A0A1G3TGB2_9PROT) HSP 1 Score: 58.2 bits (139), Expect = 7.200e-9 Identity = 32/84 (38.10%), Postives = 51/84 (60.71%), Query Frame = 1
Query: 1 IFVMIFGISLPARAEQAADTGAVTREVIPGSELMTHQERERYRRRLRGAKSPADAQQIQGEHVRQMRERARLRGLRLPEEKPAG 252
+F+ +S + + T +E + GS+LMT QER +R +LR AK+ + +QI+ EH M+ERA+ +G+ LP+E PAG
Sbjct: 15 LFLSTGSLSAADQDKSQKTTQTQEQEQVYGSQLMTQQERTEHRNKLRAAKTAQEREQIRNEHHALMKERAKAKGITLPDEPPAG 98
BLAST of mRNA_P-wetherbeei_contig55439.1.1 vs. uniprot
Match: UPI0004DF0B8D (hypothetical protein n=1 Tax=Thiomonas sp. FB-Cd TaxID=1158292 RepID=UPI0004DF0B8D) HSP 1 Score: 57.8 bits (138), Expect = 9.330e-9 Identity = 31/58 (53.45%), Postives = 41/58 (70.69%), Query Frame = 1
Query: 76 EVIPGSELMTHQERERYRRRLRGAKSPADAQQIQGEHVRQMRERARLRGLRLPEEKPA 249
E I GS+LMT QER YR RLR AK+ + + ++ EH +QM+ERAR RG+ LP+ PA
Sbjct: 35 ETIYGSQLMTRQERNEYRARLREAKTVREREHLRAEHHKQMQERARERGVTLPDNPPA 92 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig55439.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig55439.1.1 >prot_P-wetherbeei_contig55439.1.1 ID=prot_P-wetherbeei_contig55439.1.1|Name=mRNA_P-wetherbeei_contig55439.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=86bp MIFGISLPARAEQAADTGAVTREVIPGSELMTHQERERYRRRLRGAKSPAback to top mRNA from alignment at P-wetherbeei_contig55439:64..330+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig55439.1.1 ID=mRNA_P-wetherbeei_contig55439.1.1|Name=mRNA_P-wetherbeei_contig55439.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=267bp|location=Sequence derived from alignment at P-wetherbeei_contig55439:64..330+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig55439:64..330+ >mRNA_P-wetherbeei_contig55439.1.1 ID=mRNA_P-wetherbeei_contig55439.1.1|Name=mRNA_P-wetherbeei_contig55439.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=258bp|location=Sequence derived from alignment at P-wetherbeei_contig55439:64..330+ (Phaeothamnion wetherbeei SAG_119_79)back to top |