mRNA_P-wetherbeei_contig55289.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig55289.1.1 vs. uniprot
Match: UPI001903D212 (MmcQ/YjbR family DNA-binding protein n=1 Tax=Aestuariivirga sp. YIM B02566 TaxID=2800327 RepID=UPI001903D212) HSP 1 Score: 108 bits (270), Expect = 2.990e-29 Identity = 47/58 (81.03%), Postives = 53/58 (91.38%), Query Frame = 1
Query: 1 MTYKEYNAFCKSLPATTYVMQWGGSHVWKVGGKVFAIGGWDDGEQPRITCKVSPIAYE 174
MTY++YNAFC SLPATTYVMQWGGSHVWKVGGKVFA+GGWD+GE P IT KVS +A+E
Sbjct: 1 MTYEQYNAFCGSLPATTYVMQWGGSHVWKVGGKVFAVGGWDEGEHPHITFKVSDLAFE 58
BLAST of mRNA_P-wetherbeei_contig55289.1.1 vs. uniprot
Match: A0A6G6WZK5_9HYPH (MmcQ/YjbR family DNA-binding protein n=1 Tax=Nordella sp. HKS 07 TaxID=2712222 RepID=A0A6G6WZK5_9HYPH) HSP 1 Score: 104 bits (260), Expect = 9.940e-28 Identity = 46/58 (79.31%), Postives = 52/58 (89.66%), Query Frame = 1
Query: 1 MTYKEYNAFCKSLPATTYVMQWGGSHVWKVGGKVFAIGGWDDGEQPRITCKVSPIAYE 174
MTY++YNAFC SLPATTYVMQWGGSHVWKVGGKVFAIGGWD+ +P IT KVS +A+E
Sbjct: 1 MTYEQYNAFCASLPATTYVMQWGGSHVWKVGGKVFAIGGWDEEAEPHITFKVSDLAFE 58
BLAST of mRNA_P-wetherbeei_contig55289.1.1 vs. uniprot
Match: A0A537NP95_9PROT (MmcQ/YjbR family DNA-binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NP95_9PROT) HSP 1 Score: 103 bits (257), Expect = 2.840e-27 Identity = 45/58 (77.59%), Postives = 51/58 (87.93%), Query Frame = 1
Query: 1 MTYKEYNAFCKSLPATTYVMQWGGSHVWKVGGKVFAIGGWDDGEQPRITCKVSPIAYE 174
M Y++YNAFC+ LP+TTYV+QWGGSHVWKVGGKVFAIGGWDDG + IT KVS IAYE
Sbjct: 1 MNYRQYNAFCRRLPSTTYVVQWGGSHVWKVGGKVFAIGGWDDGAEAHITFKVSDIAYE 58
BLAST of mRNA_P-wetherbeei_contig55289.1.1 vs. uniprot
Match: UPI00190C0D12 (MmcQ/YjbR family DNA-binding protein n=1 Tax=Bradyrhizobium diazoefficiens TaxID=1355477 RepID=UPI00190C0D12) HSP 1 Score: 100 bits (250), Expect = 3.030e-26 Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 1
Query: 1 MTYKEYNAFCKSLPATTYVMQWGGSHVWKVGGKVFAIGGWDDGEQPRITCKVSPIAYE 174
MTYKEYNAFC+ LPATTYV+QWGGSHVWKVGGKVFAIGGW D ++P T KV+ IAYE
Sbjct: 1 MTYKEYNAFCRKLPATTYVVQWGGSHVWKVGGKVFAIGGWHD-DEPAYTFKVNDIAYE 57
BLAST of mRNA_P-wetherbeei_contig55289.1.1 vs. uniprot
Match: A0A8F7ZK17_9HYPH (Uncharacterized protein n=1 Tax=Methylovirgula sp. HY1 TaxID=2822761 RepID=A0A8F7ZK17_9HYPH) HSP 1 Score: 100 bits (250), Expect = 3.300e-26 Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 1
Query: 1 MTYKEYNAFCKSLPATTYVMQWGGSHVWKVGGKVFAIGGWDDGEQPRITCKVSPIAYE 174
MTY+E+NAFC+SLP TTYV+QWGGSHVWKVGGKVFAIGGW D E P IT KVS +AYE
Sbjct: 1 MTYEEFNAFCRSLPVTTYVVQWGGSHVWKVGGKVFAIGGWQDAE-PAITFKVSDVAYE 57
BLAST of mRNA_P-wetherbeei_contig55289.1.1 vs. uniprot
Match: A0A7V2ALK3_9PROT (MmcQ/YjbR family DNA-binding protein n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A7V2ALK3_9PROT) HSP 1 Score: 100 bits (248), Expect = 6.110e-26 Identity = 45/58 (77.59%), Postives = 52/58 (89.66%), Query Frame = 1
Query: 1 MTYKEYNAFCKSLPATTYVMQWGGSHVWKVGGKVFAIGGWDDGEQPRITCKVSPIAYE 174
MTY+EYNA+C+SL ATTYVMQWGGSHVWKVGGKVFAIGGW +G+ P IT KVS +A+E
Sbjct: 1 MTYQEYNAYCESLCATTYVMQWGGSHVWKVGGKVFAIGGWGNGKYPGITFKVSEMAFE 58
BLAST of mRNA_P-wetherbeei_contig55289.1.1 vs. uniprot
Match: UPI00036019EC (MmcQ/YjbR family DNA-binding protein n=1 Tax=Methylosinus sp. LW4 TaxID=136993 RepID=UPI00036019EC) HSP 1 Score: 100 bits (248), Expect = 6.460e-26 Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 1
Query: 1 MTYKEYNAFCKSLPATTYVMQWGGSHVWKVGGKVFAIGGWDDGEQPRITCKVSPIAYE 174
MTY EYNAFC +LPAT++V+QWGGSHVWKVGGKVFAIGGWD+GE PR T KV IAYE
Sbjct: 1 MTYDEYNAFCAALPATSHVVQWGGSHVWKVGGKVFAIGGWDEGE-PRFTFKVGDIAYE 57
BLAST of mRNA_P-wetherbeei_contig55289.1.1 vs. uniprot
Match: UPI000417994C (MmcQ/YjbR family DNA-binding protein n=1 Tax=Methylocapsa acidiphila TaxID=133552 RepID=UPI000417994C) HSP 1 Score: 99.8 bits (247), Expect = 9.700e-26 Identity = 46/58 (79.31%), Postives = 52/58 (89.66%), Query Frame = 1
Query: 1 MTYKEYNAFCKSLPATTYVMQWGGSHVWKVGGKVFAIGGWDDGEQPRITCKVSPIAYE 174
MTY EYNAFC +LPAT++V+QWGGSHVWKVGGKVFAIGGWD+G PR+T KVS IAYE
Sbjct: 1 MTYDEYNAFCGALPATSHVVQWGGSHVWKVGGKVFAIGGWDEGA-PRLTFKVSDIAYE 57
BLAST of mRNA_P-wetherbeei_contig55289.1.1 vs. uniprot
Match: A0A2E2HG13_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E2HG13_9GAMM) HSP 1 Score: 98.2 bits (243), Expect = 3.720e-25 Identity = 42/58 (72.41%), Postives = 50/58 (86.21%), Query Frame = 1
Query: 1 MTYKEYNAFCKSLPATTYVMQWGGSHVWKVGGKVFAIGGWDDGEQPRITCKVSPIAYE 174
MTY EY+AFC SLP TT V+QWGG+HVWKVGGKVFAIGGW D ++P IT KVSP++Y+
Sbjct: 1 MTYDEYDAFCASLPVTTQVIQWGGAHVWKVGGKVFAIGGWSDDDKPAITFKVSPLSYD 58
BLAST of mRNA_P-wetherbeei_contig55289.1.1 vs. uniprot
Match: A0A6B8KDH5_9HYPH (MmcQ/YjbR family DNA-binding protein n=2 Tax=Methylocystaceae TaxID=31993 RepID=A0A6B8KDH5_9HYPH) HSP 1 Score: 97.8 bits (242), Expect = 5.280e-25 Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 1
Query: 1 MTYKEYNAFCKSLPATTYVMQWGGSHVWKVGGKVFAIGGWDDGEQPRITCKVSPIAYE 174
MTY EYNAFC +LPAT++V+QWGGS VWKVGGKVFAIGGWD+GE PR T KVS IAYE
Sbjct: 1 MTYDEYNAFCGALPATSHVVQWGGSDVWKVGGKVFAIGGWDEGE-PRFTFKVSDIAYE 57 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig55289.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig55289.1.1 >prot_P-wetherbeei_contig55289.1.1 ID=prot_P-wetherbeei_contig55289.1.1|Name=mRNA_P-wetherbeei_contig55289.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=58bp MTYKEYNAFCKSLPATTYVMQWGGSHVWKVGGKVFAIGGWDDGEQPRITCback to top mRNA from alignment at P-wetherbeei_contig55289:352..525+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig55289.1.1 ID=mRNA_P-wetherbeei_contig55289.1.1|Name=mRNA_P-wetherbeei_contig55289.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=174bp|location=Sequence derived from alignment at P-wetherbeei_contig55289:352..525+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig55289:352..525+ >mRNA_P-wetherbeei_contig55289.1.1 ID=mRNA_P-wetherbeei_contig55289.1.1|Name=mRNA_P-wetherbeei_contig55289.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=174bp|location=Sequence derived from alignment at P-wetherbeei_contig55289:352..525+ (Phaeothamnion wetherbeei SAG_119_79)back to top |