mRNA_P-wetherbeei_contig55258.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig55258.1.1 vs. uniprot
Match: A0A140GUT4_9HYPH (Translation initiation factor IF-2 n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A140GUT4_9HYPH) HSP 1 Score: 296 bits (759), Expect = 1.500e-92 Identity = 155/172 (90.12%), Postives = 163/172 (94.77%), Query Frame = 1
Query: 1 DTAQRIAEELGHTVKRVAEADVEEGVFDAADNPAEMTPRAAVVTVMGHVDHGKTSLLDAIRSTNVVSGEAGGITQHIGAYQVDSPSHGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAKVPMIVAINKIDKTDSKPERVRSELLQHEVQVE 516
DTAQ IAEELGHTVKRVAEADVEEGVFD AD+P ++ PRA VVTVMGHVDHGKTSLLDAIR TNVVSGEAGGITQHIGAYQVDSPSHGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAKVPMIVAINK+DK D+ P RVR++LLQ+EVQVE
Sbjct: 356 DTAQLIAEELGHTVKRVAEADVEEGVFDVADDPDDLEPRAPVVTVMGHVDHGKTSLLDAIRQTNVVSGEAGGITQHIGAYQVDSPSHGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAKVPMIVAINKMDKPDANPMRVRTDLLQYEVQVE 527
BLAST of mRNA_P-wetherbeei_contig55258.1.1 vs. uniprot
Match: A0A1W6ZPB3_9HYPH (Translation initiation factor IF-2 n=1 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZPB3_9HYPH) HSP 1 Score: 295 bits (756), Expect = 2.580e-92 Identity = 153/172 (88.95%), Postives = 163/172 (94.77%), Query Frame = 1
Query: 1 DTAQRIAEELGHTVKRVAEADVEEGVFDAADNPAEMTPRAAVVTVMGHVDHGKTSLLDAIRSTNVVSGEAGGITQHIGAYQVDSPSHGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAKVPMIVAINKIDKTDSKPERVRSELLQHEVQVE 516
DTAQ IAEELGHTVKRVAE+DVEEG+FD AD+P +T RA VVT+MGHVDHGKTSLLDAIRS NVVSGEAGGITQHIGAYQV+SPSHGKITFIDTPGHAAFTAMRARGAKVTDIV+LVVAADDGVMPQTIEAI HAKAAKVPMIVAINKIDK D+KP+RVR+ELLQHEVQVE
Sbjct: 329 DTAQLIAEELGHTVKRVAESDVEEGLFDTADDPDTLTSRAPVVTIMGHVDHGKTSLLDAIRSANVVSGEAGGITQHIGAYQVESPSHGKITFIDTPGHAAFTAMRARGAKVTDIVILVVAADDGVMPQTIEAIQHAKAAKVPMIVAINKIDKPDAKPDRVRTELLQHEVQVE 500
BLAST of mRNA_P-wetherbeei_contig55258.1.1 vs. uniprot
Match: J9DD25_9RHOB (Translation initiation factor IF-2 n=2 Tax=Rhodovulum sp. PH10 TaxID=1187851 RepID=J9DD25_9RHOB) HSP 1 Score: 289 bits (739), Expect = 4.930e-92 Identity = 150/172 (87.21%), Postives = 160/172 (93.02%), Query Frame = 1
Query: 1 DTAQRIAEELGHTVKRVAEADVEEGVFDAADNPAEMTPRAAVVTVMGHVDHGKTSLLDAIRSTNVVSGEAGGITQHIGAYQVDSPSHGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAKVPMIVAINKIDKTDSKPERVRSELLQHEVQVE 516
DTAQ IAEELGHTVKRV+EADVEEG+FD AD+P ++ PR AVVT+MGHVDHGKTSLLDAIR NVVSGEAGGITQHIGAYQV +PS KITFIDTPGHAAFTAMRARGAKVTD+VVLVVAADDGVMPQTIEAI HAKAAKVPMIVAINKIDK D+KPERVR+ELLQHEVQVE
Sbjct: 83 DTAQLIAEELGHTVKRVSEADVEEGLFDVADDPVDLEPRPAVVTIMGHVDHGKTSLLDAIRHANVVSGEAGGITQHIGAYQVTAPSGSKITFIDTPGHAAFTAMRARGAKVTDVVVLVVAADDGVMPQTIEAIQHAKAAKVPMIVAINKIDKPDAKPERVRTELLQHEVQVE 254
BLAST of mRNA_P-wetherbeei_contig55258.1.1 vs. uniprot
Match: A0A537NMY0_9PROT (Translation initiation factor IF-2 (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NMY0_9PROT) HSP 1 Score: 286 bits (731), Expect = 1.680e-91 Identity = 147/172 (85.47%), Postives = 160/172 (93.02%), Query Frame = 1
Query: 1 DTAQRIAEELGHTVKRVAEADVEEGVFDAADNPAEMTPRAAVVTVMGHVDHGKTSLLDAIRSTNVVSGEAGGITQHIGAYQVDSPSHGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAKVPMIVAINKIDKTDSKPERVRSELLQHEVQVE 516
DTAQ +AEELGHTVKRVAE+DVEEG+FDAAD+P+ + PR VVTVMGHVDHGKTSLLDAIRST V +GEAGGITQHIGAYQV +PS KITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQT+EAINHAKAAK PMIVAINKID+ D+KPERVR+ELLQHE+QVE
Sbjct: 23 DTAQLLAEELGHTVKRVAESDVEEGLFDAADDPSALVPRPPVVTVMGHVDHGKTSLLDAIRSTEVAAGEAGGITQHIGAYQVTAPSGNKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHAKAAKAPMIVAINKIDRPDAKPERVRNELLQHEIQVE 194
BLAST of mRNA_P-wetherbeei_contig55258.1.1 vs. uniprot
Match: A0A537SUC7_9PROT (GTP-binding protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537SUC7_9PROT) HSP 1 Score: 283 bits (724), Expect = 1.380e-90 Identity = 146/172 (84.88%), Postives = 160/172 (93.02%), Query Frame = 1
Query: 1 DTAQRIAEELGHTVKRVAEADVEEGVFDAADNPAEMTPRAAVVTVMGHVDHGKTSLLDAIRSTNVVSGEAGGITQHIGAYQVDSPSHGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAKVPMIVAINKIDKTDSKPERVRSELLQHEVQVE 516
DTAQ +AEELGHTVKRVAE+DVEEG+FD AD+P + PR VVTVMGHVDHGKTSLLDAIRST+V +GEAGGITQHIGAYQV +PS KITFIDTPGHAAF+AMRARGA+VTDIVVLVVAADDGVMPQT+EAINHAKAAKVPMIVAINKID+ D+KPERVR+ELLQHEVQVE
Sbjct: 307 DTAQLLAEELGHTVKRVAESDVEEGLFDVADDPDSLVPRPPVVTVMGHVDHGKTSLLDAIRSTDVAAGEAGGITQHIGAYQVTAPSGNKITFIDTPGHAAFSAMRARGARVTDIVVLVVAADDGVMPQTVEAINHAKAAKVPMIVAINKIDRPDAKPERVRTELLQHEVQVE 478
BLAST of mRNA_P-wetherbeei_contig55258.1.1 vs. uniprot
Match: A0A521VRB7_9HYPH (Translation initiation factor IF-2 n=1 Tax=Xanthobacteraceae bacterium TaxID=2021379 RepID=A0A521VRB7_9HYPH) HSP 1 Score: 288 bits (737), Expect = 1.610e-89 Identity = 150/172 (87.21%), Postives = 161/172 (93.60%), Query Frame = 1
Query: 1 DTAQRIAEELGHTVKRVAEADVEEGVFDAADNPAEMTPRAAVVTVMGHVDHGKTSLLDAIRSTNVVSGEAGGITQHIGAYQVDSPSHGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAKVPMIVAINKIDKTDSKPERVRSELLQHEVQVE 516
DTAQ IAEE+GHTVKRVAE+DVEEG+FD AD+PA++ PR VVTVMGHVDHGKTSLLDAIR+ NVVSGEAGGITQHIGAYQV S GKITFIDTPGHAAF+AMRARGAKVTDIV+LVVAADDGVMPQTIEAINHAKAAKVPMIVAINKIDK D+KPERVR+ELLQHEVQVE
Sbjct: 331 DTAQLIAEEMGHTVKRVAESDVEEGLFDTADDPAKVQPRPPVVTVMGHVDHGKTSLLDAIRAANVVSGEAGGITQHIGAYQVTSSQGGKITFIDTPGHAAFSAMRARGAKVTDIVILVVAADDGVMPQTIEAINHAKAAKVPMIVAINKIDKADAKPERVRTELLQHEVQVE 502
BLAST of mRNA_P-wetherbeei_contig55258.1.1 vs. uniprot
Match: W3RP57_9BRAD (Translation initiation factor IF-2 n=1 Tax=Afipia sp. P52-10 TaxID=1429916 RepID=W3RP57_9BRAD) HSP 1 Score: 288 bits (737), Expect = 1.750e-89 Identity = 151/173 (87.28%), Postives = 164/173 (94.80%), Query Frame = 1
Query: 1 DTAQRIAEELGHTVKRVAEADVEEGVFDAADNPA-EMTPRAAVVTVMGHVDHGKTSLLDAIRSTNVVSGEAGGITQHIGAYQVDSPSHGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAKVPMIVAINKIDKTDSKPERVRSELLQHEVQVE 516
DTAQ +AEELGHTVKRVAE+DVEEG+FD AD+ A + TPR+ VVTVMGHVDHGKTSLLDA+RS NVVSGEAGGITQHIGAYQV++P+ GKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQT+EAINHAKAAKVPMIVAINKIDK D+KPERVR+ELLQHEVQVE
Sbjct: 335 DTAQLVAEELGHTVKRVAESDVEEGLFDVADDHATDTTPRSPVVTVMGHVDHGKTSLLDALRSANVVSGEAGGITQHIGAYQVNAPNGGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHAKAAKVPMIVAINKIDKADAKPERVRTELLQHEVQVE 507
BLAST of mRNA_P-wetherbeei_contig55258.1.1 vs. uniprot
Match: A0A1M3CLZ3_9BRAD (Translation initiation factor IF-2 (Fragment) n=2 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A1M3CLZ3_9BRAD) HSP 1 Score: 278 bits (712), Expect = 7.450e-89 Identity = 145/172 (84.30%), Postives = 156/172 (90.70%), Query Frame = 1
Query: 1 DTAQRIAEELGHTVKRVAEADVEEGVFDAADNPAEMTPRAAVVTVMGHVDHGKTSLLDAIRSTNVVSGEAGGITQHIGAYQVDSPSHGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAKVPMIVAINKIDKTDSKPERVRSELLQHEVQVE 516
DTAQ IAEELGHTVKRVA +DVEEG+FD D+ + PR+ VVTVMGHVDHGKTSLLDA+R NVVSGEAGGITQHIGAYQV SP KITFIDTPGHAAFTAMRARGAKVTDIV+LVVAADDGVMPQTIEAINHAKAAKVPMI+AINKIDK D++PERVR+ELLQHEVQVE
Sbjct: 5 DTAQLIAEELGHTVKRVAASDVEEGLFDVVDDSTDTEPRSPVVTVMGHVDHGKTSLLDALRHANVVSGEAGGITQHIGAYQVASPDGKKITFIDTPGHAAFTAMRARGAKVTDIVILVVAADDGVMPQTIEAINHAKAAKVPMIIAINKIDKPDARPERVRTELLQHEVQVE 176
BLAST of mRNA_P-wetherbeei_contig55258.1.1 vs. uniprot
Match: A0A833GFJ5_9HYPH (Translation initiation factor IF-2 n=1 Tax=Pseudorhodoplanes sp. TaxID=1934341 RepID=A0A833GFJ5_9HYPH) HSP 1 Score: 285 bits (730), Expect = 1.430e-88 Identity = 145/172 (84.30%), Postives = 160/172 (93.02%), Query Frame = 1
Query: 1 DTAQRIAEELGHTVKRVAEADVEEGVFDAADNPAEMTPRAAVVTVMGHVDHGKTSLLDAIRSTNVVSGEAGGITQHIGAYQVDSPSHGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAKVPMIVAINKIDKTDSKPERVRSELLQHEVQVE 516
DTAQ IAEELGHTVKRVAE+DVEEG+FD AD+P + RA VVT+MGHVDHGKTSLLDAIR T V +GEAGGITQHIGAYQV SPSHGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQT+EA++HAKAA+VP+IVAINKIDK D+KP+RVR+ELLQHE+QVE
Sbjct: 321 DTAQLIAEELGHTVKRVAESDVEEGLFDTADDPVTLVARAPVVTIMGHVDHGKTSLLDAIRQTEVAAGEAGGITQHIGAYQVTSPSHGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAVHHAKAARVPIIVAINKIDKPDAKPDRVRTELLQHEIQVE 492
BLAST of mRNA_P-wetherbeei_contig55258.1.1 vs. uniprot
Match: A0A327L172_9HYPH (Translation initiation factor IF-2 n=2 Tax=Rhodoplanes TaxID=29407 RepID=A0A327L172_9HYPH) HSP 1 Score: 286 bits (732), Expect = 1.440e-88 Identity = 148/172 (86.05%), Postives = 159/172 (92.44%), Query Frame = 1
Query: 1 DTAQRIAEELGHTVKRVAEADVEEGVFDAADNPAEMTPRAAVVTVMGHVDHGKTSLLDAIRSTNVVSGEAGGITQHIGAYQVDSPSHGKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAKVPMIVAINKIDKTDSKPERVRSELLQHEVQVE 516
DTAQ IAEELGHTVKRV+EADVEEG+FD AD P ++ PR VVT+MGHVDHGKTSLLDAIR TNVVSGEAGGITQHIGAYQV +PS KITFIDTPGHAAFTAMRARGAKVTD+VVLVVAADDGVMPQT+EAI HAKAAKVP+IVAINKIDK D+KPERVR+ELLQHEVQVE
Sbjct: 362 DTAQLIAEELGHTVKRVSEADVEEGLFDVADAPEDLLPRPPVVTIMGHVDHGKTSLLDAIRKTNVVSGEAGGITQHIGAYQVTAPSGAKITFIDTPGHAAFTAMRARGAKVTDVVVLVVAADDGVMPQTVEAIQHAKAAKVPLIVAINKIDKPDAKPERVRTELLQHEVQVE 533 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig55258.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig55258.1.1 >prot_P-wetherbeei_contig55258.1.1 ID=prot_P-wetherbeei_contig55258.1.1|Name=mRNA_P-wetherbeei_contig55258.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=172bp DTAQRIAEELGHTVKRVAEADVEEGVFDAADNPAEMTPRAAVVTVMGHVDback to top mRNA from alignment at P-wetherbeei_contig55258:3..518+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig55258.1.1 ID=mRNA_P-wetherbeei_contig55258.1.1|Name=mRNA_P-wetherbeei_contig55258.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=516bp|location=Sequence derived from alignment at P-wetherbeei_contig55258:3..518+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig55258:3..518+ >mRNA_P-wetherbeei_contig55258.1.1 ID=mRNA_P-wetherbeei_contig55258.1.1|Name=mRNA_P-wetherbeei_contig55258.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=516bp|location=Sequence derived from alignment at P-wetherbeei_contig55258:3..518+ (Phaeothamnion wetherbeei SAG_119_79)back to top |