mRNA_P-wetherbeei_contig55251.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig55251.1.1 vs. uniprot
Match: A0A7W0SZD4_9CHLR (Group III truncated hemoglobin n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0SZD4_9CHLR) HSP 1 Score: 112 bits (281), Expect = 3.900e-30 Identity = 50/88 (56.82%), Postives = 61/88 (69.32%), Query Frame = 1
Query: 1 PIMCDFWEKVLFQRGTYGRDAFTVHARIHAVEPLTRRHFQAWEDLWHETVDDLFAGEKANLAKLHGSRMAGSIQRRLANATDGNLLQI 264
P+MCDFWE VLFQ G Y +AF VH +H PLT HFQ W D+W TVDDLFAG++A AK+ R+AGSI+RRL +DG +L I
Sbjct: 44 PVMCDFWETVLFQAGLYKGNAFNVHLEVHTQVPLTAMHFQRWLDIWEATVDDLFAGDRAIQAKVQAGRIAGSIRRRLERTSDGEVLAI 131
BLAST of mRNA_P-wetherbeei_contig55251.1.1 vs. uniprot
Match: A0A354SBZ0_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A354SBZ0_9ACTN) HSP 1 Score: 104 bits (259), Expect = 1.070e-26 Identity = 47/89 (52.81%), Postives = 58/89 (65.17%), Query Frame = 1
Query: 1 PIMCDFWEKVLFQRGTYGRDAFTVHARIHAVEPLTRRHFQAWEDLWHETVDDLFAGEKANLAKLHGSRMAGSIQRRLANATDGNLLQIR 267
PIMCDFWE VLF+ G Y R+A VH +H PLT HF W +LW TVDD+F GEKA+LAKL SR+A S+ RRL + + I+
Sbjct: 44 PIMCDFWETVLFRAGIYKRNALRVHTALHQKSPLTSEHFSRWLELWTGTVDDMFVGEKADLAKLQASRIAWSMSRRLMGESGSEFITIK 132
BLAST of mRNA_P-wetherbeei_contig55251.1.1 vs. uniprot
Match: E3IW89_FRAIE (Uncharacterized protein n=2 Tax=Frankia TaxID=1854 RepID=E3IW89_FRAIE) HSP 1 Score: 103 bits (258), Expect = 1.880e-26 Identity = 49/88 (55.68%), Postives = 59/88 (67.05%), Query Frame = 1
Query: 1 PIMCDFWEKVLFQRGTYGRDAFTVHARIHAVEPLTRRHFQAWEDLWHETVDDLFAGEKANLAKLHGSRMAGSIQRRLANATDGNLLQI 264
PIMCDFWE VLFQ G Y R+A VHA IHA PL +HF W +LW T+DDL+ GE+A AKL +R+AGS+ RRLA L+ I
Sbjct: 53 PIMCDFWETVLFQAGAYHRNALHVHAAIHAKAPLGPQHFARWLELWAGTIDDLYQGERAERAKLQATRIAGSLCRRLAGEPASELVTI 140
BLAST of mRNA_P-wetherbeei_contig55251.1.1 vs. uniprot
Match: UPI001931CAF6 (group III truncated hemoglobin n=1 Tax=unclassified Frankia TaxID=2632575 RepID=UPI001931CAF6) HSP 1 Score: 103 bits (258), Expect = 1.880e-26 Identity = 48/88 (54.55%), Postives = 59/88 (67.05%), Query Frame = 1
Query: 1 PIMCDFWEKVLFQRGTYGRDAFTVHARIHAVEPLTRRHFQAWEDLWHETVDDLFAGEKANLAKLHGSRMAGSIQRRLANATDGNLLQI 264
PIMCDFWE VLF+ GTY R+A HA +HA PLT HF W +LW T+DDL+ GE A AKL +R+AGS++RRLA L+ I
Sbjct: 53 PIMCDFWETVLFRAGTYHRNALRAHAALHARSPLTPPHFARWLELWAGTIDDLYQGELAERAKLQATRIAGSLRRRLAGEPASELVTI 140
BLAST of mRNA_P-wetherbeei_contig55251.1.1 vs. uniprot
Match: A0A2U1FIQ3_9PSEU (Hemoglobin n=1 Tax=Actinomycetospora cinnamomea TaxID=663609 RepID=A0A2U1FIQ3_9PSEU) HSP 1 Score: 102 bits (254), Expect = 6.100e-26 Identity = 47/88 (53.41%), Postives = 54/88 (61.36%), Query Frame = 1
Query: 1 PIMCDFWEKVLFQRGTYGRDAFTVHARIHAVEPLTRRHFQAWEDLWHETVDDLFAGEKANLAKLHGSRMAGSIQRRLANATDGNLLQI 264
PIMCDFWE VLF+ G Y R+A H +HA+ PLT HF W LW TVDD FAGEKA LAK R+A SI+RRL + I
Sbjct: 45 PIMCDFWETVLFRAGLYRRNALRAHQDLHALSPLTTEHFDRWLSLWSATVDDFFAGEKAELAKTQAIRIASSIRRRLLGGAGSEFVTI 132
BLAST of mRNA_P-wetherbeei_contig55251.1.1 vs. uniprot
Match: UPI0016790A0B (group III truncated hemoglobin n=1 Tax=Streptomyces fructofermentans TaxID=152141 RepID=UPI0016790A0B) HSP 1 Score: 102 bits (253), Expect = 8.410e-26 Identity = 45/89 (50.56%), Postives = 57/89 (64.04%), Query Frame = 1
Query: 1 PIMCDFWEKVLFQRGTYGRDAFTVHARIHAVEPLTRRHFQAWEDLWHETVDDLFAGEKANLAKLHGSRMAGSIQRRLANATDGNLLQIR 267
P+MCDFWE VLF+ G Y R+A VH ++H + PL +HF W LW TVDDLF GEKA LAK R+AGS+ RR+ L+ I+
Sbjct: 47 PVMCDFWETVLFRAGLYRRNALQVHVQLHRLAPLEAQHFSRWLSLWSGTVDDLFTGEKAELAKRQAERIAGSLLRRVNGTDSSELITIQ 135
BLAST of mRNA_P-wetherbeei_contig55251.1.1 vs. uniprot
Match: A0A7G6YES5_9MICO (Group III truncated hemoglobin n=2 Tax=Leifsonia shinshuensis TaxID=150026 RepID=A0A7G6YES5_9MICO) HSP 1 Score: 102 bits (254), Expect = 9.670e-26 Identity = 47/81 (58.02%), Postives = 57/81 (70.37%), Query Frame = 1
Query: 1 PIMCDFWEKVLFQRGTYGRDAFTVHARIHAVEPLTRRHFQAWEDLWHETVDDLFAGEKANLAKLHGSRMAGSIQRRLANAT 243
PIMCDFWE VLF+ G Y R+A VH +HA+ PL HF W +W+ VDDLFAGEKA LAK+ R+AGSI RRLA ++
Sbjct: 61 PIMCDFWETVLFRAGVYRRNALQVHRDLHALTPLLPEHFDRWLLVWNGAVDDLFAGEKAQLAKVQADRIAGSIGRRLAGSS 141
BLAST of mRNA_P-wetherbeei_contig55251.1.1 vs. uniprot
Match: A0A7K0R1X0_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A7K0R1X0_9ACTN) HSP 1 Score: 100 bits (250), Expect = 2.270e-25 Identity = 47/89 (52.81%), Postives = 58/89 (65.17%), Query Frame = 1
Query: 1 PIMCDFWEKVLFQRGTYGRDAFTVHARIHAVEPLTRRHFQAWEDLWHETVDDLFAGEKANLAKLHGSRMAGSIQRRLANATDGNLLQIR 267
PIMCDFWE VLF+ G Y R+A VHA +H LT HF W D+W TVD +FAGEKA+LAKL +R+A S+ RRL + + IR
Sbjct: 45 PIMCDFWETVLFRAGKYQRNALQVHAALHRKSALTPEHFGRWLDIWTATVDAMFAGEKADLAKLQATRIAWSMSRRLMGESGSEFVTIR 133
BLAST of mRNA_P-wetherbeei_contig55251.1.1 vs. uniprot
Match: A0A4R8UGX9_9MICO (Group III truncated hemoglobin n=1 Tax=Cryobacterium sp. Sr47 TaxID=1259199 RepID=A0A4R8UGX9_9MICO) HSP 1 Score: 100 bits (250), Expect = 3.410e-25 Identity = 48/90 (53.33%), Postives = 57/90 (63.33%), Query Frame = 1
Query: 1 PIMCDFWEKVLFQRGTYGRDAFTVHARIHAVEPLTRRHFQAWEDLWHETVDDLFAGEKANLAKLHGSRMAGSIQRRLANATDGNLLQIRV 270
PI+CDFWE VLFQ G Y R+A VH ++A PL HF+ W LW TVD FAGEKA LAK G R+AGSIQRRL + + +R
Sbjct: 48 PIICDFWETVLFQAGLYRRNALQVHLSLNARAPLGAPHFERWLALWSATVDSNFAGEKAELAKTQGGRIAGSIQRRLQGGSGSDFESLRT 137
BLAST of mRNA_P-wetherbeei_contig55251.1.1 vs. uniprot
Match: UPI0010AB06E8 (group III truncated hemoglobin n=1 Tax=Agromyces sp. H66 TaxID=2529859 RepID=UPI0010AB06E8) HSP 1 Score: 99.4 bits (246), Expect = 9.940e-25 Identity = 46/77 (59.74%), Postives = 52/77 (67.53%), Query Frame = 1
Query: 1 PIMCDFWEKVLFQRGTYGRDAFTVHARIHAVEPLTRRHFQAWEDLWHETVDDLFAGEKANLAKLHGSRMAGSIQRRL 231
PIMCDFWE VLF G Y R+A VH ++A PL HF W +LW TVDDLF GEKA LAKL R+AGSI RR+
Sbjct: 46 PIMCDFWETVLFNAGLYRRNALQVHLALNARHPLLPEHFARWLELWVRTVDDLFRGEKAELAKLQAERIAGSISRRM 122 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig55251.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig55251.1.1 >prot_P-wetherbeei_contig55251.1.1 ID=prot_P-wetherbeei_contig55251.1.1|Name=mRNA_P-wetherbeei_contig55251.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=91bp MCDFWEKVLFQRGTYGRDAFTVHARIHAVEPLTRRHFQAWEDLWHETVDDback to top mRNA from alignment at P-wetherbeei_contig55251:246..524- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig55251.1.1 ID=mRNA_P-wetherbeei_contig55251.1.1|Name=mRNA_P-wetherbeei_contig55251.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=279bp|location=Sequence derived from alignment at P-wetherbeei_contig55251:246..524- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig55251:246..524- >mRNA_P-wetherbeei_contig55251.1.1 ID=mRNA_P-wetherbeei_contig55251.1.1|Name=mRNA_P-wetherbeei_contig55251.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=273bp|location=Sequence derived from alignment at P-wetherbeei_contig55251:246..524- (Phaeothamnion wetherbeei SAG_119_79)back to top |