mRNA_P-wetherbeei_contig55124.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig55124.1.1 vs. uniprot
Match: A0A5C7NNQ6_9PROT (Ferric uptake regulation protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A5C7NNQ6_9PROT) HSP 1 Score: 116 bits (290), Expect = 9.050e-32 Identity = 52/73 (71.23%), Postives = 63/73 (86.30%), Query Frame = 1
Query: 1 LHQFTEVGMLREVVIEPGRSYFDTNVSNHHHFYLEEDGALMDIPGEHIALAELPAPPAGLKVSRVDVVVRVTR 219
LHQFT+ G+LREVVIEPGRSYFDTNV++HHHF+ E+DG L DIPG+ IALA +P P+G VSRVDV+VRVT+
Sbjct: 65 LHQFTQAGLLREVVIEPGRSYFDTNVTDHHHFFFEDDGQLQDIPGDEIALARVPTAPSGTHVSRVDVIVRVTK 137
BLAST of mRNA_P-wetherbeei_contig55124.1.1 vs. uniprot
Match: UPI0004BA812B (transcriptional repressor n=3 Tax=Rhodovibrio TaxID=85274 RepID=UPI0004BA812B) HSP 1 Score: 114 bits (285), Expect = 7.540e-31 Identity = 51/73 (69.86%), Postives = 62/73 (84.93%), Query Frame = 1
Query: 1 LHQFTEVGMLREVVIEPGRSYFDTNVSNHHHFYLEEDGALMDIPGEHIALAELPAPPAGLKVSRVDVVVRVTR 219
L+QFTEVG+LREVV+EPGRSYFDTN+ +HHHFY ++DG+L DIPGE + LAELP P G +V RVDV+VRV R
Sbjct: 77 LNQFTEVGLLREVVVEPGRSYFDTNIHDHHHFYYQDDGSLQDIPGEQVRLAELPQAPDGTRVDRVDVIVRVRR 149
BLAST of mRNA_P-wetherbeei_contig55124.1.1 vs. uniprot
Match: A0A4R6WTA4_9PROT (Ferric uptake regulation protein n=1 Tax=Dongia mobilis TaxID=578943 RepID=A0A4R6WTA4_9PROT) HSP 1 Score: 112 bits (279), Expect = 4.370e-30 Identity = 50/71 (70.42%), Postives = 60/71 (84.51%), Query Frame = 1
Query: 1 LHQFTEVGMLREVVIEPGRSYFDTNVSNHHHFYLEEDGALMDIPGEHIALAELPAPPAGLKVSRVDVVVRV 213
LHQFT G+LREVV+EPGRSYFDTN HHHF++E G LMDIP + +ALA LPAPPAG+KV+RVDV+VR+
Sbjct: 65 LHQFTAAGLLREVVVEPGRSYFDTNTRPHHHFFVEGSGRLMDIPADDVALAHLPAPPAGMKVARVDVIVRL 135
BLAST of mRNA_P-wetherbeei_contig55124.1.1 vs. uniprot
Match: UPI001872BB3D (transcriptional repressor n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI001872BB3D) HSP 1 Score: 111 bits (277), Expect = 9.860e-30 Identity = 49/71 (69.01%), Postives = 58/71 (81.69%), Query Frame = 1
Query: 1 LHQFTEVGMLREVVIEPGRSYFDTNVSNHHHFYLEEDGALMDIPGEHIALAELPAPPAGLKVSRVDVVVRV 213
LHQFTE G+LREVV+E GRSYFDTNV++HHHFY E+ G L DIPGE + L LP PP G KV+RVDV++RV
Sbjct: 68 LHQFTEAGLLREVVVESGRSYFDTNVTDHHHFYFEDSGRLQDIPGEMVQLENLPTPPVGAKVARVDVIIRV 138
BLAST of mRNA_P-wetherbeei_contig55124.1.1 vs. uniprot
Match: A0A3S2Z8D3_9PROT (Ferric uptake regulation protein n=1 Tax=Hwanghaeella grinnelliae TaxID=2500179 RepID=A0A3S2Z8D3_9PROT) HSP 1 Score: 110 bits (276), Expect = 1.180e-29 Identity = 49/72 (68.06%), Postives = 58/72 (80.56%), Query Frame = 1
Query: 1 LHQFTEVGMLREVVIEPGRSYFDTNVSNHHHFYLEEDGALMDIPGEHIALAELPAPPAGLKVSRVDVVVRVT 216
LHQF E G+LREVV+EPGRSYFDTN+ NHHHFY + G L+DIP H+ LA LP PP+G KV RVDVVVR++
Sbjct: 63 LHQFKEAGLLREVVVEPGRSYFDTNIDNHHHFYDPQTGELIDIPSSHVTLASLPTPPSGKKVDRVDVVVRLS 134
BLAST of mRNA_P-wetherbeei_contig55124.1.1 vs. uniprot
Match: UPI000E5CDBC6 (transcriptional repressor n=1 Tax=Algihabitans albus TaxID=2164067 RepID=UPI000E5CDBC6) HSP 1 Score: 110 bits (276), Expect = 1.360e-29 Identity = 48/71 (67.61%), Postives = 58/71 (81.69%), Query Frame = 1
Query: 1 LHQFTEVGMLREVVIEPGRSYFDTNVSNHHHFYLEEDGALMDIPGEHIALAELPAPPAGLKVSRVDVVVRV 213
LHQFT+ G+LREVV+E GRSYFDTNV +HHHFY E+DG L DIPG+H+ LAELP P G + RVDV++RV
Sbjct: 69 LHQFTDAGLLREVVVESGRSYFDTNVDDHHHFYFEDDGRLQDIPGDHVRLAELPDAPEGAAIRRVDVIIRV 139
BLAST of mRNA_P-wetherbeei_contig55124.1.1 vs. uniprot
Match: UPI0003B6E7EA (transcriptional repressor n=2 Tax=Fodinicurvata TaxID=1121829 RepID=UPI0003B6E7EA) HSP 1 Score: 110 bits (276), Expect = 1.360e-29 Identity = 47/72 (65.28%), Postives = 60/72 (83.33%), Query Frame = 1
Query: 1 LHQFTEVGMLREVVIEPGRSYFDTNVSNHHHFYLEEDGALMDIPGEHIALAELPAPPAGLKVSRVDVVVRVT 216
L+QFTE G+LREVV+EPGRSYFDTN+ +HHHF+ EE G L+DIPGE + L+ +P PP G KV RVDV++RV+
Sbjct: 69 LNQFTEAGLLREVVVEPGRSYFDTNIGDHHHFFFEESGKLVDIPGEEVQLSSVPTPPEGAKVQRVDVIIRVS 140
BLAST of mRNA_P-wetherbeei_contig55124.1.1 vs. uniprot
Match: A0A831XVS2_9GAMM (Ferric uptake regulation protein n=1 Tax=Halothiobacillaceae bacterium TaxID=2268194 RepID=A0A831XVS2_9GAMM) HSP 1 Score: 110 bits (276), Expect = 1.480e-29 Identity = 50/71 (70.42%), Postives = 58/71 (81.69%), Query Frame = 1
Query: 1 LHQFTEVGMLREVVIEPGRSYFDTNVSNHHHFYLEEDGALMDIPGEHIALAELPAPPAGLKVSRVDVVVRV 213
LHQFTE G+LREVV+EPGRSYFDTN S+HHHF+ EE G L DIPGE IA+ +LP PP G V RVD++VRV
Sbjct: 66 LHQFTEAGLLREVVVEPGRSYFDTNTSDHHHFFHEETGDLQDIPGEAIAVGQLPLPPEGTSVQRVDIIVRV 136
BLAST of mRNA_P-wetherbeei_contig55124.1.1 vs. uniprot
Match: A0A8I1S0A0_9PROT (Ferric uptake regulation protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A8I1S0A0_9PROT) HSP 1 Score: 110 bits (276), Expect = 1.800e-29 Identity = 51/73 (69.86%), Postives = 62/73 (84.93%), Query Frame = 1
Query: 1 LHQFTEVGMLREVVIEPGRSYFDTNVSNHHHFYLEEDGALMDIPGEHIALAELPAPPAGLKVSRVDVVVRVTR 219
LHQFTE G+LR+VV++ GRSYFDTNV +H HF+LEE+G L+DIPGE IA++ +PAPP GL V RVDVVVRV R
Sbjct: 79 LHQFTEAGLLRQVVVDAGRSYFDTNVGDHQHFFLEEEGYLIDIPGETIAVSNVPAPPEGLAVDRVDVVVRVKR 151
BLAST of mRNA_P-wetherbeei_contig55124.1.1 vs. uniprot
Match: UPI001423E480 (transcriptional repressor n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI001423E480) HSP 1 Score: 109 bits (273), Expect = 4.340e-29 Identity = 48/72 (66.67%), Postives = 59/72 (81.94%), Query Frame = 1
Query: 1 LHQFTEVGMLREVVIEPGRSYFDTNVSNHHHFYLEEDGALMDIPGEHIALAELPAPPAGLKVSRVDVVVRVT 216
LHQFT G+LREVV+EPGRSYFDTNVS+HHHFY E+ G L DIPGE + L LP PP G +V+R+DV+VR++
Sbjct: 68 LHQFTGAGLLREVVVEPGRSYFDTNVSDHHHFYFEDGGRLQDIPGEQVHLEGLPTPPEGTRVARIDVIVRLS 139 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig55124.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig55124.1.1 >prot_P-wetherbeei_contig55124.1.1 ID=prot_P-wetherbeei_contig55124.1.1|Name=mRNA_P-wetherbeei_contig55124.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=67bp MLREVVIEPGRSYFDTNVSNHHHFYLEEDGALMDIPGEHIALAELPAPPAback to top mRNA from alignment at P-wetherbeei_contig55124:2..226+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig55124.1.1 ID=mRNA_P-wetherbeei_contig55124.1.1|Name=mRNA_P-wetherbeei_contig55124.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=225bp|location=Sequence derived from alignment at P-wetherbeei_contig55124:2..226+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig55124:2..226+ >mRNA_P-wetherbeei_contig55124.1.1 ID=mRNA_P-wetherbeei_contig55124.1.1|Name=mRNA_P-wetherbeei_contig55124.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=201bp|location=Sequence derived from alignment at P-wetherbeei_contig55124:2..226+ (Phaeothamnion wetherbeei SAG_119_79)back to top |