mRNA_P-wetherbeei_contig551.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig551.1.1 vs. uniprot
Match: A0A835YNB7_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNB7_9STRA) HSP 1 Score: 161 bits (407), Expect = 1.910e-43 Identity = 71/143 (49.65%), Postives = 94/143 (65.73%), Query Frame = 3
Query: 549 PAEVSKKLYMGVPTACGIDPELPQVGHVLHDPNNRWHDPIFEKHTLGGLDCYPVYMQGALYALSFGLVDYLYSGREELIVFTNEDVTVGAWLHGVDRELVQLGHLGDGSLWRCPCRRASWSPHNNTMPFHHKCKGPRRLRACA 977
P V +K+Y G+PTACG++ P +G V+ DPN++WHD F HTLGGLDCYP Y QGA Y LS LV YL+ GR +L+ FTNEDVT+G+WL GVDRE++ + + LW C C + + +T F H CK +L+ CA
Sbjct: 75 PPAVKEKVYAGIPTACGLESN-PHIGRVIKDPNHKWHDAKFVSHTLGGLDCYPAYHQGAFYLLSEPLVQYLHQGRSKLLTFTNEDVTMGSWLMGVDREMIAFNSISEARLWECTCAKYTKWLKYDTNAFFHNCKSLDQLQKCA 216
BLAST of mRNA_P-wetherbeei_contig551.1.1 vs. uniprot
Match: D7FQB9_ECTSI (Hexosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB9_ECTSI) HSP 1 Score: 153 bits (387), Expect = 3.530e-38 Identity = 71/154 (46.10%), Postives = 96/154 (62.34%), Query Frame = 3
Query: 519 KRCAMPHEQQPAEVSKKLYMGVPTACGIDPELP--QVGHVLHDPNNRWHDPIFEKHTLGGLDCYPVYMQGALYALSFGLVDYLYSGREELIVFTNEDVTVGAWLHGVDRELVQLGHLGDGSLWRCPCRRASWSPHNNTMPFHHKCKGPRRLRAC 974
+R A PA + K+Y G+PTAC + P P +VG V+ D + +W+D + HT+ GLDCYPVYMQGA Y LS+ LV++L G +L+ F NEDVT+G WLHGVDR + L L D +W C C+R +++P + F H CKG LR C
Sbjct: 295 RRTASQMHLVPAHIKPKVYGGIPTACHL-PNNPDDEVGKVIVDMDEKWYDGKYLNHTMNGLDCYPVYMQGAFYILSYPLVEFLNQGSSKLLTFDNEDVTIGLWLHGVDRAIFPLNDLRDARMWECSCKRPNFNPGGDANVFFHGCKGMDDLRGC 447
BLAST of mRNA_P-wetherbeei_contig551.1.1 vs. uniprot
Match: A0A6H5JHW0_9PHAE (Hexosyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHW0_9PHAE) HSP 1 Score: 151 bits (381), Expect = 1.210e-37 Identity = 70/154 (45.45%), Postives = 95/154 (61.69%), Query Frame = 3
Query: 519 KRCAMPHEQQPAEVSKKLYMGVPTACGIDPELPQ--VGHVLHDPNNRWHDPIFEKHTLGGLDCYPVYMQGALYALSFGLVDYLYSGREELIVFTNEDVTVGAWLHGVDRELVQLGHLGDGSLWRCPCRRASWSPHNNTMPFHHKCKGPRRLRAC 974
+R A PA + K+Y G+PTAC + P P VG V+ D +++W+D + HT+ GLDCYPVYMQGA Y LS+ LV++L G +L+ F NEDVT+G WLHGVDR + L L D +W C C+R +++P + F H CK LR C
Sbjct: 255 RRTASQMHLVPAHIKPKVYGGIPTACHL-PNNPNDAVGKVIVDMDDKWYDGKYLNHTMNGLDCYPVYMQGAFYILSYPLVEFLNQGSSKLLTFDNEDVTIGLWLHGVDRAIFPLNDLRDARVWECSCKRPNFNPGGDANVFFHNCKSMDDLRGC 407
BLAST of mRNA_P-wetherbeei_contig551.1.1 vs. uniprot
Match: A0A6H5KLW3_9PHAE (Hexosyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLW3_9PHAE) HSP 1 Score: 145 bits (366), Expect = 1.470e-36 Identity = 73/157 (46.50%), Postives = 100/157 (63.69%), Query Frame = 3
Query: 513 VTKRCAMPHEQQPAEVSKKLYMGVPTACG--IDPELPQVGHVLHDPNNRWHDPIFEKHTLGGLDCYPVYMQGALYALSFGLVDYLYSGREELIVFTNEDVTVGAWLHGVDRELVQLGHLGDGSLWRCPCRRASWSPHNNTMP-FHHKCKGPRRLRAC 974
+T+ +M H+ P E+S K+Y GVPTAC +P+ G V+ +P++RW D + +HTLGGLDC+P YMQGA Y L+ LV++LY G E L FTNEDVT+G+WL GVDRE+V++ +L LW C C R + F H CKG +L+ C
Sbjct: 136 LTRIASMLHDLDP-EISGKVYAGVPTACNQSTNPDY-WNGRVMKNPDHRWFDSKYVQHTLGGLDCFPAYMQGAFYILAQPLVEHLYRGHEHLECFTNEDVTIGSWLMGVDREMVEMYNLHTSHLWDCLCARTQITVKTRRKQMFFHNCKGLSQLKLC 290
BLAST of mRNA_P-wetherbeei_contig551.1.1 vs. uniprot
Match: A0A835YTA1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTA1_9STRA) HSP 1 Score: 146 bits (368), Expect = 8.310e-35 Identity = 69/146 (47.26%), Postives = 88/146 (60.27%), Query Frame = 3
Query: 546 QPAEVSKKLYMGVPTACGIDPELPQVGHVLHDPNNRWHDPIFEKHTLGGLDCYPVYMQGALYALSFGLVDYLYSGREELIVFTNEDVTVGAWLHGVDRELVQLGHLGDGSLWRCPCR---RASWSPHNNTMPFHHKCKGPRRLRAC 974
Q ++LY GVPTACG+ P VG V+ D NRW+DP F HT+GGL CYPVYMQGA Y L+ LV++L GR + F NEDVTVG+WL GVDR++V + + LW C C W+ ++ F H CK +LR C
Sbjct: 422 QTQATQRRLYAGVPTACGVHRNNPNVGRVIMDKTNRWYDPKFVTHTMGGLPCYPVYMQGAFYVLAQPLVEFLNLGRPHWVTFQNEDVTVGSWLLGVDRDIVTIDDITTARLWGCQCSLDTMPQWARKSSV--FFHDCKALEKLRRC 565
BLAST of mRNA_P-wetherbeei_contig551.1.1 vs. uniprot
Match: D8LT07_ECTSI (Beta-1,3-n-acetylglucosaminyltransferase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT07_ECTSI) HSP 1 Score: 144 bits (362), Expect = 9.090e-34 Identity = 72/157 (45.86%), Postives = 100/157 (63.69%), Query Frame = 3
Query: 513 VTKRCAMPHEQQPAEVSKKLYMGVPTACG--IDPELPQVGHVLHDPNNRWHDPIFEKHTLGGLDCYPVYMQGALYALSFGLVDYLYSGREELIVFTNEDVTVGAWLHGVDRELVQLGHLGDGSLWRCPCRRASWSPHNNTMP-FHHKCKGPRRLRAC 974
+T+ +M H+ P E+ K+Y+GVPTAC +P+ G V+ +P++RW D + +HTLGGLDC+P YMQGA Y L+ LV++LY G E L FTNEDVT+G+WL GVDRE+V++ +L LW C C R + F H CKG +L+ C
Sbjct: 472 LTRIASMLHDLDP-EIRGKVYVGVPTACNQSTNPDY-WNGRVMKNPDHRWFDSKYVQHTLGGLDCFPAYMQGAFYILAQPLVEHLYRGHEHLECFTNEDVTIGSWLMGVDREMVEMYNLRTSHLWDCLCARTQITVKTRKKHMFFHNCKGLSQLKLC 626
BLAST of mRNA_P-wetherbeei_contig551.1.1 vs. uniprot
Match: A0A835YWI3_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWI3_9STRA) HSP 1 Score: 138 bits (347), Expect = 4.680e-33 Identity = 66/150 (44.00%), Postives = 88/150 (58.67%), Query Frame = 3
Query: 549 PAEVSKKLYMGVPTACGIDPELPQVGHVLHDPNNRWHDPIFEKHTLGGLDCYPVYMQGALYALSFGLVDYLYSGREELIVFTNEDVTVGAWLHGVDRELVQLGHLGDGSLWRCPCRR------ASWSPHNNTMPFHHKCKGPRRLRACAI 980
P E KK+Y GVPT C + P VG V DP ++W+D + +HT+G ++CYP Y QGA Y LS LV++LY GR+ L+ F NEDVT+G WL GVDR +V L L LW C C A++ ++ F H CK ++ CAI
Sbjct: 233 PEETKKKVYAGVPTHCNM-PGHQMVGRVFSDPTHKWYDERYVEHTMGSMECYPPYHQGAGYILSRSLVEFLYKGRDHLLTFINEDVTMGTWLMGVDRSVVSLRDLDGARLWECTCASYRFAHDAAFHKNHQNNAFFHNCKQAWQMLKCAI 381
BLAST of mRNA_P-wetherbeei_contig551.1.1 vs. uniprot
Match: A0A835Z4X8_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4X8_9STRA) HSP 1 Score: 126 bits (317), Expect = 3.800e-29 Identity = 74/208 (35.58%), Postives = 97/208 (46.63%), Query Frame = 3
Query: 513 VTKRCAMPHEQQPAEVSKKLYMGVPTACGIDPELPQVGHVLHDPNNRWHDPIFEKHTLGGLDCYPVYM----------------------------------------------------QGALYALSFGLVDYLYSGREELIVFTNEDVTVGAWLHGVDRELVQLGHLGDGSLWRCPCRRAS-WSPHNNTMPFHHKCKGPRRLRACA 977
V KR A+ P V ++Y GVPTACG++ G ++ DP ++WHD F HTLGGLDCYP Y QGA Y LS LV +L+ GR +L+ F NEDVTVGAW+ ++RE+V LG L LW C C + W ++ + FHH CK +L+ACA
Sbjct: 141 VAKRMAV----LPPAVQDRVYAGVPTACGLEAHS-DSGRIIRDPTHKWHDAKFVAHTLGGLDCYPAYXXXXXXXXXXXXXXXXXXXXXRQRGLRGGACGQSLLELKLAVHNSLDKYPAYHQGAFYLLSQPLVAHLHRGRAQLVAFANEDVTVGAWMMALNREMVALGSLSAAHLWDCTCATPTKWLRYDPNV-FHHNCKALAQLQACA 342
BLAST of mRNA_P-wetherbeei_contig551.1.1 vs. uniprot
Match: D7G6P0_ECTSI (Hexosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6P0_ECTSI) HSP 1 Score: 127 bits (318), Expect = 1.680e-28 Identity = 62/118 (52.54%), Postives = 75/118 (63.56%), Query Frame = 3
Query: 546 QPAEVSKKLYMGVPTACG--IDPELPQVGHVLHDPNNRWHDPIFEKHTLGGLDCYPVYMQGALYALSFGLVDYLYSGREELIVFTNEDVTVGAWLHGVDRELVQLGHLGDGSLWRCPC 893
QP E K+Y GVPTAC +P + +VG V+ D ++W+D F HTL GLDCYPVYMQGA Y L+ LV++LY GRE F NEDVTVG+WL GVDR L + LW C C
Sbjct: 305 QPEESKDKIYAGVPTACNSPANPSV-KVGRVIKDHKDKWYDQKFVHHTLAGLDCYPVYMQGAFYVLAQPLVEHLYRGREHYDTFINEDVTVGSWLLGVDRALGTIHDFESSRLWNCVC 421
BLAST of mRNA_P-wetherbeei_contig551.1.1 vs. uniprot
Match: UPI00098E1774 (probable beta-1,3-galactosyltransferase 14 isoform X1 n=3 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E1774) HSP 1 Score: 55.5 bits (132), Expect = 9.720e-5 Identity = 40/124 (32.26%), Postives = 65/124 (52.42%), Query Frame = 3
Query: 624 GHVLHDPNNRWHDPIFEKHTLGGLDCYPVYMQGALYALSFGLVDYLYSGREELI-VFTNEDVTVGAWLHGVDRELVQLGHLGDGSLWRCPCRRAS---W--------SPHNNTMPFHHK--CKG 953
G VL DP +W++P + L G + Y Y G++YALS+ +V+ L R +++ +F+NEDVT+GAW+ ++ + H D +L CR +S W +P + H K C+G
Sbjct: 243 GLVLTDPGQKWYEP---RSDLLGHE-YFSYAGGSIYALSYEVVENLVGLRRDVVRLFSNEDVTIGAWMLAMN-----VHHEDDRALCEPECRPSSVAVWDDGCSGLCNPEARMLELHEKEICRG 357 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig551.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig551.1.1 >prot_P-wetherbeei_contig551.1.1 ID=prot_P-wetherbeei_contig551.1.1|Name=mRNA_P-wetherbeei_contig551.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=162bp MPHEQQPAEVSKKLYMGVPTACGIDPELPQVGHVLHDPNNRWHDPIFEKHback to top mRNA from alignment at P-wetherbeei_contig551:3388..5490+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig551.1.1 ID=mRNA_P-wetherbeei_contig551.1.1|Name=mRNA_P-wetherbeei_contig551.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2103bp|location=Sequence derived from alignment at P-wetherbeei_contig551:3388..5490+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig551:3388..5490+ >mRNA_P-wetherbeei_contig551.1.1 ID=mRNA_P-wetherbeei_contig551.1.1|Name=mRNA_P-wetherbeei_contig551.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=486bp|location=Sequence derived from alignment at P-wetherbeei_contig551:3388..5490+ (Phaeothamnion wetherbeei SAG_119_79)back to top |