mRNA_P-wetherbeei_contig55052.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig55052.1.1
Unique NamemRNA_P-wetherbeei_contig55052.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig55052.1.1 vs. uniprot
Match: UPI00190C577B (Gfo/Idh/MocA family oxidoreductase n=1 Tax=Bradyrhizobium diazoefficiens TaxID=1355477 RepID=UPI00190C577B)

HSP 1 Score: 151 bits (382), Expect = 1.880e-42
Identity = 72/116 (62.07%), Postives = 89/116 (76.72%), Query Frame = 1
Query:    1 QGGQYRLTLSSVIGHAPNRGEAYIFGDKGTLAFITPLQGDEHLLLAKKGGSGLSPLAIDPGKRGAWRVEEEFINAIRGREPITHTDFVTATKYMEWTDAVAQSMRTRAEVALPLQI 348
            QGGQYRL +SS IGH  +R EA+  G+KGTLA+  P +G+ +L +AK GG+ + PLAIDP KRGAWRVEEEF+NA+RG E +THTDF+T  KYMEWTDAV  S+  R EV LPL +
Sbjct:  237 QGGQYRLIVSSTIGHTTSRSEAWFHGEKGTLAYCIPHEGEPYLQVAKMGGA-IGPLAIDPAKRGAWRVEEEFVNAVRGCEQVTHTDFLTGVKYMEWTDAVNLSLCERREVQLPLHL 351          
BLAST of mRNA_P-wetherbeei_contig55052.1.1 vs. uniprot
Match: A0A2S6U2G0_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium MarineAlpha4_Bin1 TaxID=2013074 RepID=A0A2S6U2G0_9PROT)

HSP 1 Score: 131 bits (329), Expect = 2.680e-35
Identity = 61/114 (53.51%), Postives = 77/114 (67.54%), Query Frame = 1
Query:    1 QGGQYRLTLSSVIGHAPNRGEAYIFGDKGTLAFITPLQGDEHLLLAKKGGSGLSPLAIDPGKRGAWRVEEEFINAIRGREPITHTDFVTATKYMEWTDAVAQSMRTRAEVALPL 342
            QGGQ R  +S+V+GHAP   + +IFG +GTL       G   L   ++GG  ++ + +DP KRG WRVE EFINAIRG EP+THTDF TA +YMEWTDAV  S+R    +ALPL
Sbjct:  159 QGGQMRFNVSTVLGHAPANADIWIFGTQGTLNLHEDRTGKMTLHAGQRGGDAMAAVTVDPAKRGGWRVEAEFINAIRGAEPVTHTDFATALRYMEWTDAVTLSIRRGERIALPL 272          
BLAST of mRNA_P-wetherbeei_contig55052.1.1 vs. uniprot
Match: A0A6A7KRT0_9PROT (GFO_IDH_MocA domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6A7KRT0_9PROT)

HSP 1 Score: 131 bits (330), Expect = 1.040e-34
Identity = 65/114 (57.02%), Postives = 77/114 (67.54%), Query Frame = 1
Query:    1 QGGQYRLTLSSVIGHAPNRGEAYIFGDKGTLAFITPLQGDEHLLLAKKGGSGLSPLAIDPGKRGAWRVEEEFINAIRGREPITHTDFVTATKYMEWTDAVAQSMRTRAEVALPL 342
            QGGQ R + S+V+G AP + EA IFG +GT+       G   L   K+G S L  +AIDP KRG WRVEEEFINAIRGREP+THTD  T  KYMEWTDAV  ++R+   V LPL
Sbjct:  238 QGGQMRFSFSTVLGLAPMQAEASIFGTEGTICLRQDKAGKMSLWSGKRGDSDLKEVAIDPAKRGGWRVEEEFINAIRGREPVTHTDLATGVKYMEWTDAVTLALRSGNAVRLPL 351          
BLAST of mRNA_P-wetherbeei_contig55052.1.1 vs. uniprot
Match: A0A2D7CMV9_9PROT (Uncharacterized protein n=2 Tax=Rhodospirillaceae TaxID=41295 RepID=A0A2D7CMV9_9PROT)

HSP 1 Score: 128 bits (322), Expect = 1.580e-33
Identity = 64/114 (56.14%), Postives = 76/114 (66.67%), Query Frame = 1
Query:    1 QGGQYRLTLSSVIGHAPNRGEAYIFGDKGTLAFITPLQGDEHLLLAKKGGSGLSPLAIDPGKRGAWRVEEEFINAIRGREPITHTDFVTATKYMEWTDAVAQSMRTRAEVALPL 342
            QGGQ RLT+S+VIG +P   + +IFG KGTL  +     D  L    K  S L  + I+P K+G WRVE+EF+NAIRG E ITHTDF T  KYMEWTDAV  SM+TR  V LPL
Sbjct:  236 QGGQMRLTVSTVIGLSPTEVDLFIFGTKGTLRVLQKKDADIELFAGDKNASQLERIMIEPDKKGKWRVEDEFVNAIRGIEEITHTDFTTGAKYMEWTDAVTISMQTRELVPLPL 349          
BLAST of mRNA_P-wetherbeei_contig55052.1.1 vs. uniprot
Match: A0A2E5PGZ2_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E5PGZ2_9PROT)

HSP 1 Score: 126 bits (317), Expect = 7.990e-33
Identity = 57/112 (50.89%), Postives = 77/112 (68.75%), Query Frame = 1
Query:    4 GGQYRLTLSSVIGHAPNRGEAYIFGDKGTLAFITPLQGDEHLLLAKKGGSGLSPLAIDPGKRGAWRVEEEFINAIRGREPITHTDFVTATKYMEWTDAVAQSMRTRAEVALP 339
            GGQ R ++SSV GHAP+  + Y+FG +GTL       G+  L    +G +GL+ +++DP K G WRVEEEF++ IRG+E +THTDFVT  KYM+WTDAV +S+R    V LP
Sbjct:  239 GGQMRFSISSVSGHAPSNADIYLFGTEGTLMLQMDKSGEFTLYAGARGDNGLNEVSVDPAKVGGWRVEEEFVSVIRGQEQVTHTDFVTGVKYMDWTDAVTRSVREGVAVTLP 350          
BLAST of mRNA_P-wetherbeei_contig55052.1.1 vs. uniprot
Match: A0A2E9UXU5_9PROT (GFO_IDH_MocA domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E9UXU5_9PROT)

HSP 1 Score: 125 bits (314), Expect = 2.510e-32
Identity = 64/114 (56.14%), Postives = 76/114 (66.67%), Query Frame = 1
Query:    1 QGGQYRLTLSSVIGHAPNRGEAYIFGDKGTLAFITPLQGDEHLLLAKKGGSGLSPLAIDPGKRGAWRVEEEFINAIRGREPITHTDFVTATKYMEWTDAVAQSMRTRAEVALPL 342
            QGGQ RLT+S+VIG +P   + +IFG KGTL  +     +  L    K  + L P+ I+P K+G WRVEEEFINAIRG E ITHTDF TA KYMEWTDAV  S +T   V LPL
Sbjct:  236 QGGQMRLTVSNVIGLSPTEVDLFIFGTKGTLRVVQTKDTEIELFAGDKKATQLEPVNIEPEKKGKWRVEEEFINAIRGLEEITHTDFTTAXKYMEWTDAVTISXQTXKLVPLPL 349          
BLAST of mRNA_P-wetherbeei_contig55052.1.1 vs. uniprot
Match: A0A2E9Y6D7_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E9Y6D7_9PROT)

HSP 1 Score: 124 bits (312), Expect = 4.600e-32
Identity = 63/114 (55.26%), Postives = 74/114 (64.91%), Query Frame = 1
Query:    1 QGGQYRLTLSSVIGHAPNRGEAYIFGDKGTLAFITPLQGDEHLLLAKKGGSGLSPLAIDPGKRGAWRVEEEFINAIRGREPITHTDFVTATKYMEWTDAVAQSMRTRAEVALPL 342
            QGGQ R  +S+V+GH P   +  IFG  GTL           L   ++G  GL+P+ I+  KRG WRVEEEFINAIRG E +THTD  TA KYMEWTDAV QS+RT   VALPL
Sbjct:  238 QGGQIRFNVSTVLGHVPAGVDVCIFGTDGTLRLYQGGSDPMTLFAGQRGEDGLAPVDINADKRGGWRVEEEFINAIRGVEEVTHTDLTTAVKYMEWTDAVTQSLRTGQVVALPL 351          
BLAST of mRNA_P-wetherbeei_contig55052.1.1 vs. uniprot
Match: A0A1Z9S7L9_9PROT (GFO_IDH_MocA domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TMED256 TaxID=1986865 RepID=A0A1Z9S7L9_9PROT)

HSP 1 Score: 123 bits (309), Expect = 1.290e-31
Identity = 62/114 (54.39%), Postives = 76/114 (66.67%), Query Frame = 1
Query:    1 QGGQYRLTLSSVIGHAPNRGEAYIFGDKGTLAFITPLQGDEHLLLAKKGGSGLSPLAIDPGKRGAWRVEEEFINAIRGREPITHTDFVTATKYMEWTDAVAQSMRTRAEVALPL 342
            QGGQ RL +++V G +    + +IFG +GTL    P  G+  L   K+G + L  + I   KRGAWRVEEEFINAIRG+E +THTDF TA KYMEWTDAV  S+R R  V LPL
Sbjct:  238 QGGQMRLNVTTVAGLSAYPVDIHIFGTEGTLRLYQPRGGEMALAAGKRGDAKLKDVKIAKSKRGAWRVEEEFINAIRGKEEVTHTDFATAVKYMEWTDAVTMSLRRREVVKLPL 351          
BLAST of mRNA_P-wetherbeei_contig55052.1.1 vs. uniprot
Match: A0A2E2YC85_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E2YC85_9PROT)

HSP 1 Score: 122 bits (306), Expect = 3.320e-31
Identity = 63/115 (54.78%), Postives = 76/115 (66.09%), Query Frame = 1
Query:    1 QGGQYRLTLSSVIGHAPNRGEAYIFGDKGTLAFITPLQGDEHLLLAKKGGSGLSPLAIDPGKRGAWRVEEEFINAIRGREPITHTDFVTATKYMEWTDAVAQSMRTRAEVALPLQ 345
            QGGQ RL++SSVIG+  N  + YI G KGTL       G + L  A KG   L  + I    RG WRVEEEFINAI+G+E I+HTDF TA KYMEWTDAV +S++T   V LPL+
Sbjct:  236 QGGQMRLSVSSVIGNMENIVDIYICGTKGTLRLCEKKDGKKRLYGASKGSDKLEQIIIKDENRGMWRVEEEFINAIQGKEDISHTDFSTAVKYMEWTDAVTKSLKTGCVVQLPLR 350          
BLAST of mRNA_P-wetherbeei_contig55052.1.1 vs. uniprot
Match: A0A2P5VLX7_9PROT (1,5-anhydro-D-fructose reductase n=1 Tax=Alphaproteobacteria bacterium MarineAlpha1_Bin1 TaxID=2013065 RepID=A0A2P5VLX7_9PROT)

HSP 1 Score: 121 bits (303), Expect = 9.020e-31
Identity = 59/112 (52.68%), Postives = 75/112 (66.96%), Query Frame = 1
Query:    1 QGGQYRLTLSSVIGHAPNRGEAYIFGDKGTLAFITPLQGDEHLLLAKKGGSGLSPLAIDPGKRGAWRVEEEFINAIRGREPITHTDFVTATKYMEWTDAVAQSMRTRAEVAL 336
            QGGQ R  +S+V+G+AP R +  IFG +GTL  +    G   L    +G  GL  + IDP K+G WRVEEEFINAIRG E +THTDF TA KYMEW+DAV +S R+   V++
Sbjct:  237 QGGQLRFNVSTVLGNAPARTDVCIFGTEGTLRLLQVGDGSLTLYSGSRGVEGLKVVEIDPAKKGGWRVEEEFINAIRGVEAVTHTDFTTAVKYMEWSDAVTRSWRSGISVSV 348          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig55052.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00190C577B1.880e-4262.07Gfo/Idh/MocA family oxidoreductase n=1 Tax=Bradyrh... [more]
A0A2S6U2G0_9PROT2.680e-3553.51Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A6A7KRT0_9PROT1.040e-3457.02GFO_IDH_MocA domain-containing protein n=1 Tax=Alp... [more]
A0A2D7CMV9_9PROT1.580e-3356.14Uncharacterized protein n=2 Tax=Rhodospirillaceae ... [more]
A0A2E5PGZ2_9PROT7.990e-3350.89Uncharacterized protein n=1 Tax=Rhodospirillaceae ... [more]
A0A2E9UXU5_9PROT2.510e-3256.14GFO_IDH_MocA domain-containing protein n=1 Tax=Rho... [more]
A0A2E9Y6D7_9PROT4.600e-3255.26Uncharacterized protein n=1 Tax=Rhodospirillaceae ... [more]
A0A1Z9S7L9_9PROT1.290e-3154.39GFO_IDH_MocA domain-containing protein n=1 Tax=Rho... [more]
A0A2E2YC85_9PROT3.320e-3154.78Uncharacterized protein n=1 Tax=Rhodospirillaceae ... [more]
A0A2P5VLX7_9PROT9.020e-3152.681,5-anhydro-D-fructose reductase n=1 Tax=Alphaprot... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig55052contigP-wetherbeei_contig55052:3..362 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1469245.JFBG01000097_gene1355
PFAMsGFO_IDH_MocA
Model size360
Max annot lvl2|Bacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.61e-26
EggNOG OGsCOG0673@1|root,COG0673@2|Bacteria
Descriptioninositol 2-dehydrogenase activity
Cds size360
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186821.2948067-CDS-P-wetherbeei_contig55052:2..3621683186821.2948067-CDS-P-wetherbeei_contig55052:2..362Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig55052 3..362 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig55052.1.1prot_P-wetherbeei_contig55052.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig55052 3..362 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig55052.1.1

>prot_P-wetherbeei_contig55052.1.1 ID=prot_P-wetherbeei_contig55052.1.1|Name=mRNA_P-wetherbeei_contig55052.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=120bp
QGGQYRLTLSSVIGHAPNRGEAYIFGDKGTLAFITPLQGDEHLLLAKKGG
SGLSPLAIDPGKRGAWRVEEEFINAIRGREPITHTDFVTATKYMEWTDAV
AQSMRTRAEVALPLQIAAA*
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mRNA from alignment at P-wetherbeei_contig55052:3..362+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig55052.1.1 ID=mRNA_P-wetherbeei_contig55052.1.1|Name=mRNA_P-wetherbeei_contig55052.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=360bp|location=Sequence derived from alignment at P-wetherbeei_contig55052:3..362+ (Phaeothamnion wetherbeei SAG_119_79)
CAGGGCGGCCAGTATCGCCTGACCCTGTCCTCGGTGATCGGCCACGCGCC GAACCGCGGCGAGGCCTATATCTTCGGCGACAAGGGCACGCTGGCCTTCA TCACGCCGCTCCAAGGCGACGAGCATCTGCTCCTCGCCAAGAAGGGCGGC AGCGGCCTCAGTCCCCTTGCCATCGACCCCGGCAAGCGCGGCGCCTGGCG CGTCGAGGAAGAATTCATCAACGCGATAAGAGGCCGTGAGCCCATCACCC ACACCGACTTCGTGACCGCCACCAAGTACATGGAGTGGACGGACGCGGTC GCGCAGTCGATGCGCACGCGCGCCGAGGTCGCCCTGCCCTTGCAGATCGC AGCGGCGTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig55052:3..362+

>mRNA_P-wetherbeei_contig55052.1.1 ID=mRNA_P-wetherbeei_contig55052.1.1|Name=mRNA_P-wetherbeei_contig55052.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=360bp|location=Sequence derived from alignment at P-wetherbeei_contig55052:3..362+ (Phaeothamnion wetherbeei SAG_119_79)
CAGGGCGGCCAGTATCGCCTGACCCTGTCCTCGGTGATCGGCCACGCGCC
GAACCGCGGCGAGGCCTATATCTTCGGCGACAAGGGCACGCTGGCCTTCA
TCACGCCGCTCCAAGGCGACGAGCATCTGCTCCTCGCCAAGAAGGGCGGC
AGCGGCCTCAGTCCCCTTGCCATCGACCCCGGCAAGCGCGGCGCCTGGCG
CGTCGAGGAAGAATTCATCAACGCGATAAGAGGCCGTGAGCCCATCACCC
ACACCGACTTCGTGACCGCCACCAAGTACATGGAGTGGACGGACGCGGTC
GCGCAGTCGATGCGCACGCGCGCCGAGGTCGCCCTGCCCTTGCAGATCGC
AGCGGCGTAA
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