mRNA_P-wetherbeei_contig5505.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5505.1.1
Unique NamemRNA_P-wetherbeei_contig5505.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5505.1.1 vs. uniprot
Match: A0A6H5JRL4_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRL4_9PHAE)

HSP 1 Score: 363 bits (932), Expect = 8.100e-122
Identity = 181/233 (77.68%), Postives = 208/233 (89.27%), Query Frame = 1
Query:    1 PSLKEEENAYINIFQTSTPGVVQISTFIAQRDAFSMNVLEVPSGTGSGFVWDSDGHIVTNFHVIRQAQSAQIRVTQGDGTQVTYQSRVRGFDPDKDVAVLEIDGLPKERLQPLPLGTSAEVRVGQLALAIGNPFGLDHTLTTGVVSGLGREVRAPSGRPISNVIQTDAAINPGNSGGPLLDSSGRVIGMNTAIYSPSGASAGIGFAIPIDTLKSIVGQIIATGRVRRPLIGIT 699
            PSL ++E  YI+IF+ STPGVV I+TF+ QRDAFSMNVLEVP+GTGSGFVWD  G+IVTNFHVIR+AQSAQ+R+T GDGTQ T+Q++V+G+DPDKDVAVL+ID  P E L+P+ LG S  ++VGQLALAIGNPFGLDHTLT GVVSGLGREV++PSGRPISNVIQTDAAINPGNSGGPLLDS GR+IGMNTAIYSPSG SAGIGFAIPIDTLK++VG II  GRV RP+IGIT
Sbjct:  142 PSLMQDEKGYISIFEKSTPGVVYINTFVNQRDAFSMNVLEVPAGTGSGFVWDDQGNIVTNFHVIREAQSAQVRLTLGDGTQKTFQAQVKGYDPDKDVAVLKIDA-PSELLRPIGLGASNALKVGQLALAIGNPFGLDHTLTMGVVSGLGREVKSPSGRPISNVIQTDAAINPGNSGGPLLDSVGRIIGMNTAIYSPSGGSAGIGFAIPIDTLKTVVGTIIQKGRVSRPIIGIT 373          
BLAST of mRNA_P-wetherbeei_contig5505.1.1 vs. uniprot
Match: A0A836C9K9_9STRA (Serine type protease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9K9_9STRA)

HSP 1 Score: 352 bits (902), Expect = 6.080e-119
Identity = 174/228 (76.32%), Postives = 203/228 (89.04%), Query Frame = 1
Query:   19 ENAYINIFQTSTPGVVQISTFIAQRDAFSMNVLEVPSGTGSGFVWDSDGHIVTNFHVIRQAQSAQIRVTQ-GDGTQVTYQSRVRGFDPDKDVAVLEIDGLPKERLQPLPLGTSAEVRVGQLALAIGNPFGLDHTLTTGVVSGLGREVRAPSGRPISNVIQTDAAINPGNSGGPLLDSSGRVIGMNTAIYSPSGASAGIGFAIPIDTLKSIVGQIIATGRVRRPLIGIT 699
            EN  I +F+ STPGVV ISTF+ QRDAFSMN+LEVP+GTGSGFVWD +GHIVTNFHVIR A +AQ+R+T    G Q +Y +RV+G+DPDKDVAVL+ID  P E+LQP+PLG+SA ++VGQLALAIGNPFGLDHTLTTGV+SGLGREVR+PSGRPISNV+QTDAAINPGNSGGPLL+S+G++ GMNTAIYSPSGASAGIGFAIPIDT+K+IVG II TG V RP+IGIT
Sbjct:    9 ENGLIKVFEQSTPGVVYISTFVNQRDAFSMNILEVPAGTGSGFVWDKEGHIVTNFHVIRSANTAQVRITDPSTGKQASYAARVQGYDPDKDVAVLKIDA-PPEQLQPIPLGSSAVLKVGQLALAIGNPFGLDHTLTTGVISGLGREVRSPSGRPISNVVQTDAAINPGNSGGPLLNSAGQITGMNTAIYSPSGASAGIGFAIPIDTIKTIVGMIIETGSVTRPVIGIT 235          
BLAST of mRNA_P-wetherbeei_contig5505.1.1 vs. uniprot
Match: K8YVK1_NANGC (PDZ domain-containing protein (Fragment) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YVK1_NANGC)

HSP 1 Score: 331 bits (848), Expect = 1.690e-109
Identity = 163/227 (71.81%), Postives = 196/227 (86.34%), Query Frame = 1
Query:   19 ENAYINIFQTSTPGVVQISTFIAQRDAFSMNVLEVPSGTGSGFVWDSDGHIVTNFHVIRQAQSAQIRVTQGDGTQVTYQSRVRGFDPDKDVAVLEIDGLPKERLQPLPLGTSAEVRVGQLALAIGNPFGLDHTLTTGVVSGLGREVRAPSGRPISNVIQTDAAINPGNSGGPLLDSSGRVIGMNTAIYSPSGASAGIGFAIPIDTLKSIVGQIIATGRVRRPLIGIT 699
            E + I IFQ +TP V  I+TF+ QRDAFSMNV+EVP+GTGSGFVW+  G+IVTN+HVIR A+SAQ+ +T  DG Q TY++ +RGFDPDKDVAVL ++  P   L+P+P+G+S+ ++VGQ ALAIGNPFGLDHTLT+GV+SGLGREVR+PSGRPISNVIQTDAAINPGNSGGPLLDS+GR++GMNTAIYSPSGASAGIGFAIP+DTLK +V  II  G+V RPLIGIT
Sbjct:  113 ETSRIGIFQEATPSVANINTFVEQRDAFSMNVMEVPAGTGSGFVWNDKGYIVTNYHVIRSAESAQVTLTDRDGHQSTYKALLRGFDPDKDVAVLRVEA-PPASLRPIPVGSSSTLKVGQAALAIGNPFGLDHTLTSGVISGLGREVRSPSGRPISNVIQTDAAINPGNSGGPLLDSAGRLVGMNTAIYSPSGASAGIGFAIPVDTLKFVVETIIKDGKVVRPLIGIT 338          
BLAST of mRNA_P-wetherbeei_contig5505.1.1 vs. uniprot
Match: W7TLQ5_9STRA (Serine-type peptidase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TLQ5_9STRA)

HSP 1 Score: 331 bits (848), Expect = 8.160e-109
Identity = 163/227 (71.81%), Postives = 196/227 (86.34%), Query Frame = 1
Query:   19 ENAYINIFQTSTPGVVQISTFIAQRDAFSMNVLEVPSGTGSGFVWDSDGHIVTNFHVIRQAQSAQIRVTQGDGTQVTYQSRVRGFDPDKDVAVLEIDGLPKERLQPLPLGTSAEVRVGQLALAIGNPFGLDHTLTTGVVSGLGREVRAPSGRPISNVIQTDAAINPGNSGGPLLDSSGRVIGMNTAIYSPSGASAGIGFAIPIDTLKSIVGQIIATGRVRRPLIGIT 699
            E + I IFQ +TP V  I+TF+ QRDAFSMNV+EVP+GTGSGFVW+  G+IVTN+HVIR A+SAQ+ +T  DG Q TY++ +RGFDPDKDVAVL ++  P   L+P+P+G+S+ ++VGQ ALAIGNPFGLDHTLT+GV+SGLGREVR+PSGRPISNVIQTDAAINPGNSGGPLLDS+GR++GMNTAIYSPSGASAGIGFAIP+DTLK +V  II  G+V RPLIGIT
Sbjct:  234 ETSRIGIFQEATPSVANINTFVEQRDAFSMNVMEVPAGTGSGFVWNDKGYIVTNYHVIRSAESAQVTLTDRDGHQSTYKALLRGFDPDKDVAVLRVEA-PPASLRPIPVGSSSTLKVGQAALAIGNPFGLDHTLTSGVISGLGREVRSPSGRPISNVIQTDAAINPGNSGGPLLDSAGRLVGMNTAIYSPSGASAGIGFAIPVDTLKFVVETIIKDGKVVRPLIGIT 459          
BLAST of mRNA_P-wetherbeei_contig5505.1.1 vs. uniprot
Match: A0A7S2G6Y9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G6Y9_9STRA)

HSP 1 Score: 316 bits (809), Expect = 2.070e-102
Identity = 158/235 (67.23%), Postives = 194/235 (82.55%), Query Frame = 1
Query:    7 LKEEENAYINIFQTSTPGVVQISTFIAQRDAFSMNVLEVPSGTGSGFVWDSDGHIVTNFHVIRQAQSAQIRVTQGDGTQVTYQSRVRGFDPDKDVAVLEIDGLPKE----RLQPLPLGTSAEVRVGQLALAIGNPFGLDHTLTTGVVSGLGREVRAPSGRPISNVIQTDAAINPGNSGGPLLDSSGRVIGMNTAIYSPSGASAGIGFAIPIDTLKSIVGQIIATGRVRRPLIGIT 699
            L+ +E+  I +F+++TP VV I+TF+ + D FS+NVLE P GTG+GFVWD++GHIVTNFHVIR +++A I VT  +G Q TY++ +RGFDPDKDVAVL+I+   K      LQP+ LGTS  ++VGQ ALAIGNPFGLDHTLTTGV+SGLGREVR+PSGRPISNVIQTDAAINPGNSGGPLLDS G+++GMNTAIYSPSGAS GIGFAIP+DTLK +V  II  G+V RP IG++
Sbjct:   73 LRTKEDETIQLFESTTPSVVFINTFVDKVDTFSLNVLETPLGTGTGFVWDNEGHIVTNFHVIRNSEAASIVVTDKNGAQGTYRATLRGFDPDKDVAVLKIEPQLKNGTRLNLQPVNLGTSTGLKVGQSALAIGNPFGLDHTLTTGVISGLGREVRSPSGRPISNVIQTDAAINPGNSGGPLLDSKGKLVGMNTAIYSPSGASVGIGFAIPVDTLKVVVDSIIKLGKVIRPAIGVS 307          
BLAST of mRNA_P-wetherbeei_contig5505.1.1 vs. uniprot
Match: A0A7S2D2Z2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D2Z2_9STRA)

HSP 1 Score: 310 bits (793), Expect = 1.800e-100
Identity = 152/235 (64.68%), Postives = 190/235 (80.85%), Query Frame = 1
Query:    7 LKEEENAYINIFQTSTPGVVQISTFIAQRDAFSMNVLEVPSGTGSGFVWDSDGHIVTNFHVIRQAQSAQIRVTQGDGTQVTYQSRVRGFDPDKDVAVLEIDGLPKERLQ----PLPLGTSAEVRVGQLALAIGNPFGLDHTLTTGVVSGLGREVRAPSGRPISNVIQTDAAINPGNSGGPLLDSSGRVIGMNTAIYSPSGASAGIGFAIPIDTLKSIVGQIIATGRVRRPLIGIT 699
            L+  E++ I +F+++TP VV I+TFI +RD+ SMNVLE P GTGSGF+WD+ G++VTNFHVIR ++SAQ+ VT  +G Q TY + +RGFD DKD+AVL+I  +          P+ +GTS  ++VGQ ALAIGNPFGLDHTLT GV+SGLGREVR+PSGRPI+NVIQTDAAINPGNSGGPLLDSSGR++GMNTAI+SPSGAS GIGFAIP+DTLK +V  II  G+V RP IG++
Sbjct:  101 LRVRESSTIRLFESATPAVVYINTFIEKRDSLSMNVLETPQGTGSGFLWDNSGYVVTNFHVIRNSESAQVTVTDSNGDQSTYNATLRGFDADKDIAVLKITNISATAKSTPFVPVKIGTSTGLKVGQSALAIGNPFGLDHTLTVGVISGLGREVRSPSGRPITNVIQTDAAINPGNSGGPLLDSSGRLVGMNTAIFSPSGASVGIGFAIPVDTLKVVVDSIIRLGKVVRPAIGVS 335          
BLAST of mRNA_P-wetherbeei_contig5505.1.1 vs. uniprot
Match: A0A7S0BST8_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BST8_9RHOD)

HSP 1 Score: 303 bits (777), Expect = 3.560e-100
Identity = 148/231 (64.07%), Postives = 190/231 (82.25%), Query Frame = 1
Query:    7 LKEEENAYINIFQTSTPGVVQISTFIAQRDAFSMNVLEVPSGTGSGFVWDSDGHIVTNFHVIRQAQSAQIRVTQGDGTQVTYQSRVRGFDPDKDVAVLEIDGLPKERLQPLPLGTSAEVRVGQLALAIGNPFGLDHTLTTGVVSGLGREVRAPSGRPISNVIQTDAAINPGNSGGPLLDSSGRVIGMNTAIYSPSGASAGIGFAIPIDTLKSIVGQIIATGRVRRPLIGIT 699
            L  +E+A I++FQ +TP V  ++TF   R  FSMN++E+PSGTGSGFVWD+DGHIVTNFHVI+ A++A+I +      Q  + + + G+D DKDVAVL+ID   K++L+P+ +GTS  + VGQ   AIGNPFGLDHTLTTGVVSGLGRE+R+P+GRPI+NVIQTDAAINPGNSGGPLLDS G++IGMNT+IYSPSGAS+G+GFAIPIDTLK+IV ++I  GR+ RP+IGI+
Sbjct:   74 LNTQESAVISLFQDTTPSVAYVTTFAGGRTPFSMNIMEIPSGTGSGFVWDNDGHIVTNFHVIKSAEAARITLN----NQEVFNAELVGYDADKDVAVLQIDA-DKKKLKPISIGTSKNLIVGQSTYAIGNPFGLDHTLTTGVVSGLGREMRSPTGRPITNVIQTDAAINPGNSGGPLLDSQGKIIGMNTSIYSPSGASSGVGFAIPIDTLKTIVNELIRNGRIVRPVIGIS 299          
BLAST of mRNA_P-wetherbeei_contig5505.1.1 vs. uniprot
Match: A0A8J2SZR3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZR3_9STRA)

HSP 1 Score: 301 bits (770), Expect = 2.480e-98
Identity = 144/232 (62.07%), Postives = 190/232 (81.90%), Query Frame = 1
Query:    4 SLKEEENAYINIFQTSTPGVVQISTFIAQRDAFSMNVLEVPSGTGSGFVWDSDGHIVTNFHVIRQAQSAQIRVTQGDGTQVTYQSRVRGFDPDKDVAVLEIDGLPKERLQPLPLGTSAEVRVGQLALAIGNPFGLDHTLTTGVVSGLGREVRAPSGRPISNVIQTDAAINPGNSGGPLLDSSGRVIGMNTAIYSPSGASAGIGFAIPIDTLKSIVGQIIATGRVRRPLIGIT 699
            +L++ E   I +F+ +T  VV I TF  QR+A SMN ++VP GTGSGFVWD  GHIVTN+HVIR A +A + +    GT+++ ++++RG DPDKD+AVL +D +P+++L+ + +GTS+ +RVG    A+GNPFGLDHTLT GV+SGLGREVR+P+GRPI+NVIQTDAAINPGNSGGPLLDSSGR+IGMNTAIYSPSGAS+G+GFAIP+DTL ++V  ++  GRVRRP++GIT
Sbjct:   39 ALRQAELETIQLFEKATKSVVFIDTFAEQREAVSMN-MDVPQGTGSGFVWDDRGHIVTNYHVIRNAAAADVTLLVDGGTKLSRKAQLRGVDPDKDIAVLTVDDIPRDKLRKIAVGTSSNLRVGASVFAVGNPFGLDHTLTQGVISGLGREVRSPTGRPITNVIQTDAAINPGNSGGPLLDSSGRLIGMNTAIYSPSGASSGVGFAIPVDTLSTVVKALVDDGRVRRPVLGIT 269          
BLAST of mRNA_P-wetherbeei_contig5505.1.1 vs. uniprot
Match: M2XTQ8_GALSU (Serine-type peptidase (DEGP1) n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XTQ8_GALSU)

HSP 1 Score: 300 bits (769), Expect = 2.490e-97
Identity = 151/232 (65.09%), Postives = 188/232 (81.03%), Query Frame = 1
Query:    4 SLKEEENAYINIFQTSTPGVVQISTFIAQRDAFSMNVLEVPSGTGSGFVWDSDGHIVTNFHVIRQAQSAQIRVTQGDGTQVTYQSRVRGFDPDKDVAVLEIDGLPKERLQPLPLGTSAEVRVGQLALAIGNPFGLDHTLTTGVVSGLGREVRAPSGRPISNVIQTDAAINPGNSGGPLLDSSGRVIGMNTAIYSPSGASAGIGFAIPIDTLKSIVGQIIATGRVRRPLIGIT 699
            +LK++E   I +FQ +TP VV  +TF+ + D  S N++E+P+G GSGF+WD+DGHIVTNFHVIR A SA+I +  G      Y +++ G DPDKDVAVL+ID  PK  L+P+PLG S+++ VGQ A AIGNPFGLDHTLTTGVVSGLGR +R+P+G+PISNVIQTDAAINPGNSGG LLDSSGR+IGMNT+IYSPSGASAG+GFAIP+DTLK IV  +I  G+V RP+IGI+
Sbjct:  143 TLKQQEKDVIELFQNATPSVVFATTFVERLDFLSPNIMELPAGQGSGFIWDTDGHIVTNFHVIRSATSAKITLYNGH----IYDAKLVGVDPDKDVAVLKIDA-PKNELRPIPLGHSSDLIVGQSAYAIGNPFGLDHTLTTGVVSGLGRTMRSPTGKPISNVIQTDAAINPGNSGGTLLDSSGRLIGMNTSIYSPSGASAGVGFAIPVDTLKPIVSSLIKYGKVIRPVIGIS 369          
BLAST of mRNA_P-wetherbeei_contig5505.1.1 vs. uniprot
Match: A0A7S0EJU7_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EJU7_9CRYP)

HSP 1 Score: 294 bits (752), Expect = 1.670e-95
Identity = 141/232 (60.78%), Postives = 188/232 (81.03%), Query Frame = 1
Query:    4 SLKEEENAYINIFQTSTPGVVQISTFIAQRDAFSMNVLEVPSGTGSGFVWDSDGHIVTNFHVIRQAQSAQIRVTQGDGTQVTYQSRVRGFDPDKDVAVLEIDGLPKERLQPLPLGTSAEVRVGQLALAIGNPFGLDHTLTTGVVSGLGREVRAPSGRPISNVIQTDAAINPGNSGGPLLDSSGRVIGMNTAIYSPSGASAGIGFAIPIDTLKSIVGQIIATGRVRRPLIGIT 699
            +L+  E   IN+F+ +TP VV ISTF  ++D F++++ E+P GTGSGFVWD  GHIVTNFHVIR A SAQ+ ++   G Q  Y++ + G DPD D+AVL+I+  P   L+P+ +GTS++++VGQ ALAIGNPFGLDH+LT GVVSGLGRE ++P+GRPISNVIQTDAAINPGNSGG LL+S G++IGMNTAIYSPSGA++G+GFAIP+DT+K +V ++I+ G + RP+IGI+
Sbjct:   82 ALEPSEVRTINLFRENTPSVVFISTFTERQDFFTLDMEEIPQGTGSGFVWDKQGHIVTNFHVIRSANSAQVALSDAKGKQTMYKATLTGIDPDNDIAVLKIEA-PPAALRPIEVGTSSDLQVGQTALAIGNPFGLDHSLTIGVVSGLGRETKSPTGRPISNVIQTDAAINPGNSGGALLNSQGKLIGMNTAIYSPSGANSGVGFAIPVDTIKYVVKKLISDGSITRPIIGIS 312          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5505.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRL4_9PHAE8.100e-12277.68PDZ domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836C9K9_9STRA6.080e-11976.32Serine type protease n=1 Tax=Tribonema minus TaxID... [more]
K8YVK1_NANGC1.690e-10971.81PDZ domain-containing protein (Fragment) n=2 Tax=M... [more]
W7TLQ5_9STRA8.160e-10971.81Serine-type peptidase n=1 Tax=Nannochloropsis gadi... [more]
A0A7S2G6Y9_9STRA2.070e-10267.23Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2D2Z2_9STRA1.800e-10064.68Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S0BST8_9RHOD3.560e-10064.07Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A8J2SZR3_9STRA2.480e-9862.07Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
M2XTQ8_GALSU2.490e-9765.09Serine-type peptidase (DEGP1) n=1 Tax=Galdieria su... [more]
A0A7S0EJU7_9CRYP1.670e-9560.78Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5505contigP-wetherbeei_contig5505:1486..3659 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FK95
PFAMsPDZ_2,Trypsin_2
Model size702
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons7
Evalue1.49e-123
EggNOG OGsCOG0265@1|root,KOG1320@2759|Eukaryota
Descriptionserine-type endopeptidase activity
Cds size702
COG categoryO
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5505.1.1prot_P-wetherbeei_contig5505.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5505 1486..3659 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186821.205021-CDS-P-wetherbeei_contig5505:1485..15431683186821.205021-CDS-P-wetherbeei_contig5505:1485..1543Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5505 1486..1543 +
1683186821.2155783-CDS-P-wetherbeei_contig5505:1767..17991683186821.2155783-CDS-P-wetherbeei_contig5505:1767..1799Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5505 1768..1799 +
1683186821.226427-CDS-P-wetherbeei_contig5505:1994..21471683186821.226427-CDS-P-wetherbeei_contig5505:1994..2147Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5505 1995..2147 +
1683186821.2364135-CDS-P-wetherbeei_contig5505:2518..26591683186821.2364135-CDS-P-wetherbeei_contig5505:2518..2659Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5505 2519..2659 +
1683186821.2462826-CDS-P-wetherbeei_contig5505:2820..29351683186821.2462826-CDS-P-wetherbeei_contig5505:2820..2935Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5505 2821..2935 +
1683186821.2633243-CDS-P-wetherbeei_contig5505:3209..33211683186821.2633243-CDS-P-wetherbeei_contig5505:3209..3321Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5505 3210..3321 +
1683186821.2719953-CDS-P-wetherbeei_contig5505:3568..36591683186821.2719953-CDS-P-wetherbeei_contig5505:3568..3659Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5505 3569..3659 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5505.1.1

>prot_P-wetherbeei_contig5505.1.1 ID=prot_P-wetherbeei_contig5505.1.1|Name=mRNA_P-wetherbeei_contig5505.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=234bp
PSLKEEENAYINIFQTSTPGVVQISTFIAQRDAFSMNVLEVPSGTGSGFV
WDSDGHIVTNFHVIRQAQSAQIRVTQGDGTQVTYQSRVRGFDPDKDVAVL
EIDGLPKERLQPLPLGTSAEVRVGQLALAIGNPFGLDHTLTTGVVSGLGR
EVRAPSGRPISNVIQTDAAINPGNSGGPLLDSSGRVIGMNTAIYSPSGAS
AGIGFAIPIDTLKSIVGQIIATGRVRRPLIGIT*
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mRNA from alignment at P-wetherbeei_contig5505:1486..3659+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5505.1.1 ID=mRNA_P-wetherbeei_contig5505.1.1|Name=mRNA_P-wetherbeei_contig5505.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2174bp|location=Sequence derived from alignment at P-wetherbeei_contig5505:1486..3659+ (Phaeothamnion wetherbeei SAG_119_79)
CCGAGCTTGAAAGAGGAAGAAAATGCTTACATTAACATCTTCCAGACAAG CACGCCCGGTGAGCAAACACCACCATTGAAGTTACGCTCTTCTTTATCAA AAATGGTGGAAATTCCGACCATTTTGATGTCGGAATAGCGTTGATAACAG GATACACTGATAGGCTCGCTGCCACGTGTAGTACATAATGTTTTCATTGT CTTATGTGCATGGGTAGCCGTAGATGCAGGAATCTGATCGTATGCTTACA CGGGAAGCTGCATTCGCCCCTTCGAGACGCAGGCGTGGTGCAGATCTCGA CTTTTATAGCCCAGGTGACTGCAACGAGGAGGATGGTGGTTGTATTGGAG ACATGCAAGCAACTCTTGACTCAAAGTGTGATCCATGCAGCTGTGTCAGA ATCGTCGGAGACGCAAAAATTACTTCAATAACCCTTGTCCCCACACCTGA TCCGCTTTTGTCGCTGCATTCTCCAAACGACCGTTCCCGCCCGCCTGAAT CCTCTCCAGCGCGATGCCTTTTCCATGAATGTCCTGGAGGTGCCATCGGG CACGGGCTCAGGCTTTGTGTGGGATAGCGATGGGCACATCGTGACTAACT TCCACGTCATCCGGCAGGCGCAGTCGGCGCAGATCCGTGTCACGCAGGGC GACGGCACGCAGGTGGACTAGTGCAGCGGCGACGGATCGTTGTTGCAGCG CGGACCGATTCCCATAACAGGAAGATCGGACAGTTTGGTCCGGCTGCCGG CTGCCTGCCACCGCTATGGTTTGTTGGCCAAAGTGGACGCCTCTTGAAGG CGTCAATGACTCTTCTTCCCTCCGGACTGCCCTTCCGTCTTCTTACATGC TGCAGCATCCTCCTTGCAGCATTTCCGTTTCCCCCCTCCTATTTTCCTCC TTTCGTCTCTTCTTCCTTCCGCTTTTTCGCCTGTCCGAACCATCAAACAA ACGCACAAACAAACGAAACGAATCGAACGAGACGAATCGAAACGAACGGA AACACCCTTTGCGGCGATACTGTGGCGGCGCAGGTGACTTACCAGTCGCG GGTTCGGGGCTTCGACCCTGACAAGGACGTGGCGGTGCTTGAGATCGATG GCCTGCCGAAGGAGCGCCTCCAGCCGCTGCCGCTCGGCACGTCGGCCGAG GTGCGGGTTGGGCAGCTGGCGCTGGTAAGTGAACGTCTCGGTGGAGTTTC ACTGACTAGAATTTCAGTACTTGTCACCGTTACCAGAGGTACGTAGCGCG TTTCCCGGTGGAATCCTTCCCCCCAAGTCTAATTTCTTATGAATCTGGAA GACTTCCGTACCCTCTCATTTCGCTTTTTCGTCAGGCCATCGGGAACCCG TTCGGGCTGGACCATACGCTGACGACGGGGGTGGTATCGGGGCTGGGCAG GGAGGTGCGGGCGCCGAGCGGACGTCCGATCAGCAACGTCATCCAGACCG GTGGGTGCGTCTGTTTTTGCACGTGCGTGCCGGTGTGATGTAGCGGTGGC TTCGGGCTGGAATTTGGAAGGAATGGCAAGAGTCGGCGCGGACACTTTTG TCGTTACATGTGGGAGACTGAGATTATCGGCAGCCACCTGGCTTTGCGGC GATGAATTGAAAGTTTTTACACCTTCTTATATAATGTGGCGATAGCTGGC TCGCCATCTTTGATCGGAGACAGAGCTTGAGGTCGATCAACCGTTTCCTC TTTCCCTCTCCTGCCTCGCCGCAGACGCGGCGATCAATCCGGGTAACTCA GGAGGACCACTGCTCGACTCGTCTGGGCGTGTCATCGGCATGAATACCGC CATCTACAGCCCCTCGGGGGCGTCGGCGGGCATAGGGTGAGGCGGTCAAA ATGGTGGGCAGGGTGCAGTACTCCTGGCAGCTTTTGAAGAACTGGTTGCG CATCTCTCTCGCTAGCTATTTTAGCCTTGTAGAACCTGGCTGGACGAGGA AAGCGCTGTCCTTCGTTCCTAAACTTAAAGGCTAGTCTGAGGTGTCTGAA CCTTTTCTGCTTCGTGCGTTTGTTTTCGTCCCGTTGCCCCTTATGTCCAT CGCCGCGGCTCCATCTGCTGGCCGGTGCTATAGCTTTGCGATTCCAATCG ACACGCTGAAGAGCATTGTGGGGCAAATCATCGCGACCGGGAGGGTACGC CGGCCCCTCATTGGCATCACGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5505:1486..3659+

>mRNA_P-wetherbeei_contig5505.1.1 ID=mRNA_P-wetherbeei_contig5505.1.1|Name=mRNA_P-wetherbeei_contig5505.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=702bp|location=Sequence derived from alignment at P-wetherbeei_contig5505:1486..3659+ (Phaeothamnion wetherbeei SAG_119_79)
CCGAGCTTGAAAGAGGAAGAAAATGCTTACATTAACATCTTCCAGACAAG
CACGCCCGGCGTGGTGCAGATCTCGACTTTTATAGCCCAGCGCGATGCCT
TTTCCATGAATGTCCTGGAGGTGCCATCGGGCACGGGCTCAGGCTTTGTG
TGGGATAGCGATGGGCACATCGTGACTAACTTCCACGTCATCCGGCAGGC
GCAGTCGGCGCAGATCCGTGTCACGCAGGGCGACGGCACGCAGGTGACTT
ACCAGTCGCGGGTTCGGGGCTTCGACCCTGACAAGGACGTGGCGGTGCTT
GAGATCGATGGCCTGCCGAAGGAGCGCCTCCAGCCGCTGCCGCTCGGCAC
GTCGGCCGAGGTGCGGGTTGGGCAGCTGGCGCTGGCCATCGGGAACCCGT
TCGGGCTGGACCATACGCTGACGACGGGGGTGGTATCGGGGCTGGGCAGG
GAGGTGCGGGCGCCGAGCGGACGTCCGATCAGCAACGTCATCCAGACCGA
CGCGGCGATCAATCCGGGTAACTCAGGAGGACCACTGCTCGACTCGTCTG
GGCGTGTCATCGGCATGAATACCGCCATCTACAGCCCCTCGGGGGCGTCG
GCGGGCATAGGCTTTGCGATTCCAATCGACACGCTGAAGAGCATTGTGGG
GCAAATCATCGCGACCGGGAGGGTACGCCGGCCCCTCATTGGCATCACGT
GA
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