mRNA_P-wetherbeei_contig54992.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54992.1.1 vs. uniprot
Match: UPI001C219689 (alpha/beta hydrolase n=1 Tax=Nocardioides sp. G188 TaxID=2849501 RepID=UPI001C219689) HSP 1 Score: 78.6 bits (192), Expect = 7.860e-16 Identity = 38/63 (60.32%), Postives = 47/63 (74.60%), Query Frame = 1
Query: 25 TYASAVDGLPIAVYDWHATAPAAIVVISHGAAEHALRYDRFARALNAAGFTVRAPDQRGHGAS 213
++ S VDGL +A Y+WH +V ++HG AEH+ RYDRFARALN AG+TVRA D RGHGAS
Sbjct: 7 SFTSPVDGLELAGYEWHVADARGVVQVAHGLAEHSARYDRFARALNEAGYTVRALDHRGHGAS 69
BLAST of mRNA_P-wetherbeei_contig54992.1.1 vs. uniprot
Match: UPI0015531F43 (alpha/beta hydrolase n=1 Tax=Nocardioides sp. zg-1230 TaxID=2736601 RepID=UPI0015531F43) HSP 1 Score: 78.2 bits (191), Expect = 1.100e-15 Identity = 38/63 (60.32%), Postives = 47/63 (74.60%), Query Frame = 1
Query: 25 TYASAVDGLPIAVYDWHATAPAAIVVISHGAAEHALRYDRFARALNAAGFTVRAPDQRGHGAS 213
T+ S VD L +A Y+W + P +V ++HG AEH+ RYDRFARALN AG+TVRA D RGHGAS
Sbjct: 7 TFTSPVDDLELATYEWDVSDPRGVVQVAHGLAEHSARYDRFARALNDAGYTVRAIDHRGHGAS 69
BLAST of mRNA_P-wetherbeei_contig54992.1.1 vs. uniprot
Match: A0A7W0IY30_9DELT (Lysophospholipase n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A7W0IY30_9DELT) HSP 1 Score: 73.9 bits (180), Expect = 4.350e-14 Identity = 39/67 (58.21%), Postives = 47/67 (70.15%), Query Frame = 1
Query: 13 DKSWTYASAVDGLPIAVYDWHATAPAAIVVISHGAAEHALRYDRFARALNAAGFTVRAPDQRGHGAS 213
D + + S VD L I Y W A P A++VI+HGAAEHALRY+RFAR+LNA+G V A D RGHG S
Sbjct: 3 DNMFRFDSEVDALSIQTYVWQAENPKAMMVIAHGAAEHALRYERFARSLNASGIEVWAMDHRGHGQS 69
BLAST of mRNA_P-wetherbeei_contig54992.1.1 vs. uniprot
Match: A0A0Q4RUV9_9BURK (Alpha/beta hydrolase n=4 Tax=Burkholderiales TaxID=80840 RepID=A0A0Q4RUV9_9BURK) HSP 1 Score: 72.8 bits (177), Expect = 1.280e-13 Identity = 41/71 (57.75%), Postives = 45/71 (63.38%), Query Frame = 1
Query: 1 LAGMDKSWTYASAVDGLPIAVYDWHATA--PAAIVVISHGAAEHALRYDRFARALNAAGFTVRAPDQRGHG 207
L S ++ SA DG IA Y W A PA +V ISHG AEH RYDRFA+ALNAAGF V A D RGHG
Sbjct: 4 LISSSSSSSFPSAADGTQIATYTWANVAGKPAGVVQISHGLAEHGERYDRFAKALNAAGFVVHAVDHRGHG 74
BLAST of mRNA_P-wetherbeei_contig54992.1.1 vs. uniprot
Match: A0A1H0HWP3_9ACTN (Lysophospholipase, alpha-beta hydrolase superfamily n=2 Tax=Geodermatophilaceae TaxID=85030 RepID=A0A1H0HWP3_9ACTN) HSP 1 Score: 70.9 bits (172), Expect = 6.280e-13 Identity = 39/70 (55.71%), Postives = 45/70 (64.29%), Query Frame = 1
Query: 10 MDKSWTYASAVDGLPIAVYDWHATA--PAAIVVISHGAAEHALRYDRFARALNAAGFTVRAPDQRGHGAS 213
M + ++ S DGL IA Y+W P +V + HG AEH RYDRFARALNAAGF V A D RGHGAS
Sbjct: 1 MPTTASFPSPADGLAIATYEWDDVTGGPVGVVQLVHGLAEHGPRYDRFARALNAAGFLVSAADNRGHGAS 70
BLAST of mRNA_P-wetherbeei_contig54992.1.1 vs. uniprot
Match: A0A1Y5U059_9PROT (Phospholipase YtpA n=1 Tax=Oceanibacterium hippocampi TaxID=745714 RepID=A0A1Y5U059_9PROT) HSP 1 Score: 70.9 bits (172), Expect = 7.280e-13 Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = 1
Query: 16 KSWTYASAVDGLPIAVYDWHATAPAAIVVISHGAAEHALRYDRFARALNAAGFTVRAPDQRGHGAS 213
+S+++A DGL I +W AP A+V+++HG AEHA RY+ FARALN AG+ V APD RGHG S
Sbjct: 5 RSFSFAGE-DGLDIQTVEWPLDAPRAVVIVAHGMAEHASRYEGFARALNGAGYAVYAPDHRGHGRS 69
BLAST of mRNA_P-wetherbeei_contig54992.1.1 vs. uniprot
Match: A0A1H0EE04_9ACTN (Lysophospholipase, alpha-beta hydrolase superfamily n=1 Tax=Klenkia soli TaxID=1052260 RepID=A0A1H0EE04_9ACTN) HSP 1 Score: 70.1 bits (170), Expect = 1.190e-12 Identity = 39/65 (60.00%), Postives = 42/65 (64.62%), Query Frame = 1
Query: 25 TYASAVDGLPIAVYDWHATA--PAAIVVISHGAAEHALRYDRFARALNAAGFTVRAPDQRGHGAS 213
T+ S DGLPIA Y W P +V + HG AEH RYDRFARAL AAGF V A D RGHGAS
Sbjct: 4 TFPSPADGLPIATYTWDDVPGEPVGVVQLVHGLAEHGPRYDRFARALVAAGFVVSAADNRGHGAS 68
BLAST of mRNA_P-wetherbeei_contig54992.1.1 vs. uniprot
Match: UPI001E4AD4E2 (alpha/beta hydrolase n=1 Tax=Propioniciclava soli TaxID=2775081 RepID=UPI001E4AD4E2) HSP 1 Score: 69.3 bits (168), Expect = 2.280e-12 Identity = 36/68 (52.94%), Postives = 45/68 (66.18%), Query Frame = 1
Query: 10 MDKSWTYASAVDGLPIAVYDWHATAPAAIVVISHGAAEHALRYDRFARALNAAGFTVRAPDQRGHGAS 213
M ++ + S D + +A Y W AP +V I+HG AEH+ RYDR ARALNAAG+ V A D RGHGAS
Sbjct: 1 MQRTDAFVSPSDQIALARYAWPVDAPRGVVQIAHGLAEHSARYDRLARALNAAGYAVAAIDHRGHGAS 68
BLAST of mRNA_P-wetherbeei_contig54992.1.1 vs. uniprot
Match: A0A1G4XRE1_9ACTN (Lysophospholipase, alpha-beta hydrolase superfamily n=1 Tax=Klenkia marina TaxID=1960309 RepID=A0A1G4XRE1_9ACTN) HSP 1 Score: 69.3 bits (168), Expect = 2.290e-12 Identity = 39/65 (60.00%), Postives = 42/65 (64.62%), Query Frame = 1
Query: 25 TYASAVDGLPIAVYDWH--ATAPAAIVVISHGAAEHALRYDRFARALNAAGFTVRAPDQRGHGAS 213
T+ S DGL IA Y W P +V + HG AEH RYDRFARALNAAGF V A D RGHGAS
Sbjct: 4 TFPSPADGLLIATYLWDDVPAEPVGVVQVVHGLAEHGPRYDRFARALNAAGFVVSAADNRGHGAS 68
BLAST of mRNA_P-wetherbeei_contig54992.1.1 vs. uniprot
Match: UPI001C453C09 (alpha/beta hydrolase n=2 Tax=Acidovorax TaxID=12916 RepID=UPI001C453C09) HSP 1 Score: 69.3 bits (168), Expect = 2.370e-12 Identity = 37/65 (56.92%), Postives = 43/65 (66.15%), Query Frame = 1
Query: 19 SWTYASAVDGLPIAVYDWHATA--PAAIVVISHGAAEHALRYDRFARALNAAGFTVRAPDQRGHG 207
S ++ S+ DG+P+ Y W T P V ISHG AEH RYDRFA+ALNAAGF V A D RGHG
Sbjct: 6 SSSFLSSADGIPVITYTWAETPGKPVGAVQISHGLAEHGERYDRFAKALNAAGFIVHAVDHRGHG 70 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54992.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54992.1.1 >prot_P-wetherbeei_contig54992.1.1 ID=prot_P-wetherbeei_contig54992.1.1|Name=mRNA_P-wetherbeei_contig54992.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=68bp MDKSWTYASAVDGLPIAVYDWHATAPAAIVVISHGAAEHALRYDRFARALback to top mRNA from alignment at P-wetherbeei_contig54992:301..513+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54992.1.1 ID=mRNA_P-wetherbeei_contig54992.1.1|Name=mRNA_P-wetherbeei_contig54992.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=213bp|location=Sequence derived from alignment at P-wetherbeei_contig54992:301..513+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54992:301..513+ >mRNA_P-wetherbeei_contig54992.1.1 ID=mRNA_P-wetherbeei_contig54992.1.1|Name=mRNA_P-wetherbeei_contig54992.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=204bp|location=Sequence derived from alignment at P-wetherbeei_contig54992:301..513+ (Phaeothamnion wetherbeei SAG_119_79)back to top |