mRNA_P-wetherbeei_contig54972.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig54972.1.1
Unique NamemRNA_P-wetherbeei_contig54972.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig54972.1.1 vs. uniprot
Match: A0A7C4UE48_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A7C4UE48_9BACT)

HSP 1 Score: 269 bits (687), Expect = 2.800e-85
Identity = 122/180 (67.78%), Postives = 144/180 (80.00%), Query Frame = 1
Query:    1 LFEIHPAVEVQLFTTDVDGTPTTGRYTFKDKAGRVYPPKAKRLAPDFFFQDQVYRHNGDSVLLPPGELTMVAGRGPEYLMEERKVTVPAQG-----PASIQVALKRWINPVDYGYYSGDHHIHAAGCSHYTNPTEGVLAEDMFLHVKGEGLHVGCNLTWGPCYDYQRQFFEPTANAVSEP 525
            LF + PA+ V+L  TD DG PT GR+TFKD+ GRVYP +  RLAPDFFFQDQVYR +G +VLLPPGELTM  GRGPEY+ +E+K+ V   G     P  + V L+RWIN  DYG+YSGDHHIHAAGC+HYT PTEGV AEDMFLHVKGEGL+VGCNLTWGPC+++QRQFFEPT + +SEP
Sbjct:  237 LFSVKPAIPVKLRITDYDGKPTVGRFTFKDRLGRVYPLRPNRLAPDFFFQDQVYRPDGGTVLLPPGELTMTYGRGPEYVQKEKKIVVAGTGNDGVGPMELAVKLERWINASDYGWYSGDHHIHAAGCAHYTVPTEGVTAEDMFLHVKGEGLNVGCNLTWGPCFEFQRQFFEPTVSKLSEP 416          
BLAST of mRNA_P-wetherbeei_contig54972.1.1 vs. uniprot
Match: A0A2V5XZZ8_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5XZZ8_9BACT)

HSP 1 Score: 262 bits (670), Expect = 1.230e-83
Identity = 114/175 (65.14%), Postives = 138/175 (78.86%), Query Frame = 1
Query:    1 LFEIHPAVEVQLFTTDVDGTPTTGRYTFKDKAGRVYPPKAKRLAPDFFFQDQVYRHNGDSVLLPPGELTMVAGRGPEYLMEERKVTVPAQGPASIQVALKRWINPVDYGYYSGDHHIHAAGCSHYTNPTEGVLAEDMFLHVKGEGLHVGCNLTWGPCYDYQRQFFEPTANAVSEP 525
            L ++ PA+ V+L   D DG P+ GR+TF+DK G VYPP+AKRLAPD FFQ Q+YR +GD VLLPPGE  M + RGPEY ++ER V +PAQGPA + V L+RW+NP  YGY+SGDHHIHAAGC+HYT PTEGVL  DMFL VKGEGL+VGC LTWGPC+ +Q QFFEP  + +SEP
Sbjct:  237 LLDVRPAIPVKLSVKDYDGQPSCGRFTFRDKTGHVYPPQAKRLAPDLFFQRQIYRADGDIVLLPPGEFIMQSSRGPEYHLQERTVKIPAQGPAHLDVQLQRWVNPAQYGYFSGDHHIHAAGCAHYTIPTEGVLGRDMFLQVKGEGLNVGCILTWGPCFQFQHQFFEPAPDKISEP 411          
BLAST of mRNA_P-wetherbeei_contig54972.1.1 vs. uniprot
Match: A0A2G4FQV0_9PLAN (EF-hand domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2G4FQV0_9PLAN)

HSP 1 Score: 266 bits (679), Expect = 1.340e-81
Identity = 117/175 (66.86%), Postives = 141/175 (80.57%), Query Frame = 1
Query:    1 LFEIHPAVEVQLFTTDVDGTPTTGRYTFKDKAGRVYPPKAKRLAPDFFFQDQVYRHNGDSVLLPPGELTMVAGRGPEYLMEERKVTVPAQGPASIQVALKRWINPVDYGYYSGDHHIHAAGCSHYTNPTEGVLAEDMFLHVKGEGLHVGCNLTWGPCYDYQRQFFEPTANAVSEP 525
            LF+I PA+EV+L   D +G PT G + F+DKAG V+P + KRLAPDFFFQ Q+YR +G  VLLP GE TM++GRGPEY    RKV +P +GP +I+V L+RWI+   +G+YSGDHHIHAAGC+HYTNPTEGV A+DMFLHVKGEGL+VGCNLTWGPCYD+QRQFFEP  N  SEP
Sbjct:  211 LFKIRPAIEVKLKVLDENGKPTVGSFVFRDKAGHVFPSQIKRLAPDFFFQKQIYRADGGMVLLPSGEYTMISGRGPEYFQGSRKVVIPEKGPYAIEVKLERWIDAAKFGFYSGDHHIHAAGCAHYTNPTEGVFADDMFLHVKGEGLNVGCNLTWGPCYDFQRQFFEPGINKKSEP 385          
BLAST of mRNA_P-wetherbeei_contig54972.1.1 vs. uniprot
Match: A0A2H6AFP9_9BACT (EF-hand domain-containing protein n=1 Tax=bacterium HR36 TaxID=2035431 RepID=A0A2H6AFP9_9BACT)

HSP 1 Score: 263 bits (673), Expect = 1.390e-80
Identity = 115/175 (65.71%), Postives = 142/175 (81.14%), Query Frame = 1
Query:    1 LFEIHPAVEVQLFTTDVDGTPTTGRYTFKDKAGRVYPPKAKRLAPDFFFQDQVYRHNGDSVLLPPGELTMVAGRGPEYLMEERKVTVPAQGPASIQVALKRWINPVDYGYYSGDHHIHAAGCSHYTNPTEGVLAEDMFLHVKGEGLHVGCNLTWGPCYDYQRQFFEPTANAVSEP 525
            LF + PA+ V++   D DG PT GR+TFKD  GRVYPP+AKRLAPDFFFQ+Q+YR +G  V LPPG L M  GRGPEY +  R++ VP +G   ++V L+RWIN +++GYY GDHHIHAAGC+HYTNPTEGVLA+DMFLHVKGEGL+VGCNLTWGPC+++QRQFFEP  + +SEP
Sbjct:  217 LFTVRPAIPVRVRVRDWDGQPTVGRFTFKDALGRVYPPQAKRLAPDFFFQEQIYRPDGGVVYLPPGRLIMEYGRGPEYRVLRREIVVPEKGELELEVRLQRWINMMEHGYYCGDHHIHAAGCAHYTNPTEGVLAQDMFLHVKGEGLNVGCNLTWGPCFEFQRQFFEPHPHKISEP 391          
BLAST of mRNA_P-wetherbeei_contig54972.1.1 vs. uniprot
Match: A0A2V5XVV7_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5XVV7_9BACT)

HSP 1 Score: 255 bits (651), Expect = 1.810e-80
Identity = 112/175 (64.00%), Postives = 138/175 (78.86%), Query Frame = 1
Query:    1 LFEIHPAVEVQLFTTDVDGTPTTGRYTFKDKAGRVYPPKAKRLAPDFFFQDQVYRHNGDSVLLPPGELTMVAGRGPEYLMEERKVTVPAQGPASIQVALKRWINPVDYGYYSGDHHIHAAGCSHYTNPTEGVLAEDMFLHVKGEGLHVGCNLTWGPCYDYQRQFFEPTANAVSEP 525
            LF+I PAV+V+L   D DG PT  R+ F+D+AG V+PP+AKRLAPDF+FQ Q+YR +GD VLLPPG LTM   RGPEY    R VT+P++  A ++V L+RWINP+DYG+YSGDHHIH AGC+HYT+PTEGV  EDMFL V GEGL+VGC LTWGPC+DYQR+FF P  + +S P
Sbjct:  231 LFDIRPAVQVRLRVKDDDGKPTAARFIFRDEAGHVFPPQAKRLAPDFYFQPQIYRRDGDVVLLPPGRLTMQYDRGPEYRQLRRDVTIPSRASAEVEVKLERWINPMDYGFYSGDHHIHGAGCAHYTSPTEGVTPEDMFLQVNGEGLNVGCVLTWGPCFDYQRRFFTPAVHQLSGP 405          
BLAST of mRNA_P-wetherbeei_contig54972.1.1 vs. uniprot
Match: A0A2V9R4N9_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9R4N9_9BACT)

HSP 1 Score: 250 bits (639), Expect = 2.240e-80
Identity = 113/175 (64.57%), Postives = 138/175 (78.86%), Query Frame = 1
Query:    1 LFEIHPAVEVQLFTTDVDGTPTTGRYTFKDKAGRVYPPKAKRLAPDFFFQDQVYRHNGDSVLLPPGELTMVAGRGPEYLMEERKVTVPAQGPASIQVALKRWINPVDYGYYSGDHHIHAAGCSHYTNPTEGVLAEDMFLHVKGEGLHVGCNLTWGPCYDYQRQFFEPTANAVSEP 525
            LF I P V V+L   D DG  TTGR+TF D+AG VYPP+ KRLAPD FFQ Q+YRH+GD+VLLPPG+ TM  GRGPEY   +R VT+P+QG  +IQV L+RW++P+ YGYYSGDHHIHAAGC+HYT+PTEGV+  +MFL VKGEGL+VG  LTWG  ++YQRQFF P  + +SEP
Sbjct:   80 LFNIRPVVPVRLSIRDHDGKQTTGRFTFFDRAGHVYPPQVKRLAPDLFFQKQIYRHDGDTVLLPPGKFTMFYGRGPEYRWLQRSVTIPSQGEPTIQVQLERWVHPMAYGYYSGDHHIHAAGCAHYTSPTEGVVPREMFLQVKGEGLNVGSILTWGYGFNYQRQFFSPGVDRISEP 254          
BLAST of mRNA_P-wetherbeei_contig54972.1.1 vs. uniprot
Match: A0A8J7Q6W0_9BACT (CehA/McbA family metallohydrolase n=1 Tax=Zavarzinella sp. TaxID=1914240 RepID=A0A8J7Q6W0_9BACT)

HSP 1 Score: 260 bits (665), Expect = 2.840e-80
Identity = 115/175 (65.71%), Postives = 141/175 (80.57%), Query Frame = 1
Query:    1 LFEIHPAVEVQLFTTDVDGTPTTGRYTFKDKAGRVYPPKAKRLAPDFFFQDQVYRHNGDSVLLPPGELTMVAGRGPEYLMEERKVTVPAQGPASIQVALKRWINPVDYGYYSGDHHIHAAGCSHYTNPTEGVLAEDMFLHVKGEGLHVGCNLTWGPCYDYQRQFFEPTANAVSEP 525
            LFE+ PAV V+L   D +G P  GR+TF D AG VYPP+AKR+APDFFFQ+QVYR +G +V+LPPGE TM  GRGPEY ++ +KV VPA G A I V L+RW++P  +G+YSGDHHIHAAGC+HYT+PTEGV  EDMFLHVKGEGL+VGC LTWGPC+++QR FFEP  N ++EP
Sbjct:  122 LFEVKPAVSVKLGIKDENGKPAVGRFTFTDAAGHVYPPRAKRVAPDFFFQNQVYRPDGGTVVLPPGEFTMEYGRGPEYRLKTQKVKVPADGEAKIDVTLERWVDPTQFGWYSGDHHIHAAGCAHYTSPTEGVYPEDMFLHVKGEGLNVGCCLTWGPCFEFQRTFFEPGPNKLTEP 296          
BLAST of mRNA_P-wetherbeei_contig54972.1.1 vs. uniprot
Match: A0A7V1Z7D0_9BACT (EF-hand domain-containing protein n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A7V1Z7D0_9BACT)

HSP 1 Score: 261 bits (668), Expect = 7.460e-80
Identity = 116/175 (66.29%), Postives = 140/175 (80.00%), Query Frame = 1
Query:    1 LFEIHPAVEVQLFTTDVDGTPTTGRYTFKDKAGRVYPPKAKRLAPDFFFQDQVYRHNGDSVLLPPGELTMVAGRGPEYLMEERKVTVPAQGPASIQVALKRWINPVDYGYYSGDHHIHAAGCSHYTNPTEGVLAEDMFLHVKGEGLHVGCNLTWGPCYDYQRQFFEPTANAVSEP 525
            LF I PA+ V+L   D DG PT GR+TFKD  GRVYPP+AKRLAPDFFFQ+Q+YR +G  V LPPG L M  GRGPEY +  R++ VP +G   ++V L+RWIN + +GYY GDHHIHAAGC+HYTNPTEGV A+DMFLHVKGEGL+VGCNLTWGPC+++QRQFFEP  + +SEP
Sbjct:  217 LFTIRPAIPVRLRIRDWDGQPTVGRFTFKDALGRVYPPQAKRLAPDFFFQEQIYRPDGGVVYLPPGRLIMEYGRGPEYRVLRREIVVPEKGELELEVRLERWINMMAHGYYCGDHHIHAAGCAHYTNPTEGVFAQDMFLHVKGEGLNVGCNLTWGPCFEFQRQFFEPHPHKISEP 391          
BLAST of mRNA_P-wetherbeei_contig54972.1.1 vs. uniprot
Match: A0A7V8VDR1_9BACT (CehA/McbA family metallohydrolase n=2 Tax=Gemmataceae TaxID=1914233 RepID=A0A7V8VDR1_9BACT)

HSP 1 Score: 260 bits (665), Expect = 1.730e-79
Identity = 114/175 (65.14%), Postives = 140/175 (80.00%), Query Frame = 1
Query:    1 LFEIHPAVEVQLFTTDVDGTPTTGRYTFKDKAGRVYPPKAKRLAPDFFFQDQVYRHNGDSVLLPPGELTMVAGRGPEYLMEERKVTVPAQGPASIQVALKRWINPVDYGYYSGDHHIHAAGCSHYTNPTEGVLAEDMFLHVKGEGLHVGCNLTWGPCYDYQRQFFEPTANAVSEP 525
            LFE+ PA+EV+L   D DGTPT GR+TF DK G VYPP+ KRLAPDFFFQ Q+YR +G +VLLPPGE  +  GRGPEY ++ +++ +P +GP  +   L+RWI+P  +G+YSGDHHIHAAGC+HYTNPTEGVL +DMFLHVKGEGL+VGC LTWGPCY+YQRQFFE    + SEP
Sbjct:  218 LFEVRPAIEVRLKVRDFDGTPTVGRFTFTDKWGHVYPPQPKRLAPDFFFQRQIYRADGGTVLLPPGEFEVEYGRGPEYRLKRQRIVIPDKGPVELSFTLERWIHPAAWGWYSGDHHIHAAGCAHYTNPTEGVLPQDMFLHVKGEGLNVGCCLTWGPCYEYQRQFFEARPWSRSEP 392          
BLAST of mRNA_P-wetherbeei_contig54972.1.1 vs. uniprot
Match: UPI001260BBEB (CehA/McbA family metallohydrolase n=2 Tax=Tautonia TaxID=2680020 RepID=UPI001260BBEB)

HSP 1 Score: 258 bits (659), Expect = 2.370e-78
Identity = 112/175 (64.00%), Postives = 143/175 (81.71%), Query Frame = 1
Query:    1 LFEIHPAVEVQLFTTDVDGTPTTGRYTFKDKAGRVYPPKAKRLAPDFFFQDQVYRHNGDSVLLPPGELTMVAGRGPEYLMEERKVTVPAQGPASIQVALKRWINPVDYGYYSGDHHIHAAGCSHYTNPTEGVLAEDMFLHVKGEGLHVGCNLTWGPCYDYQRQFFEPTANAVSEP 525
            LFE+ PA+ V L   D+DG+PTT R TF D++G+VYPP+AKR+APD FFQ Q+YR +GD VLLPPG LTM++ RGPEY    R+VT+P QG  +++V L+RWI P  +G+YSGDHHIHAAGC+HYT+PT+G++ ED+FL V+GEGL+VGC LTWGPCYDYQR FFEPT + +SEP
Sbjct:  236 LFEVRPAIPVTLHIRDLDGSPTTARLTFLDRSGQVYPPQAKRVAPDLFFQRQIYRKDGDVVLLPPGRLTMISTRGPEYRELSREVTLPEQGEVTLEVPLERWIEPSRFGFYSGDHHIHAAGCAHYTDPTQGIVPEDVFLQVQGEGLNVGCVLTWGPCYDYQRGFFEPTVHGLSEP 410          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54972.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C4UE48_9BACT2.800e-8567.78Uncharacterized protein (Fragment) n=1 Tax=Gemmata... [more]
A0A2V5XZZ8_9BACT1.230e-8365.14Uncharacterized protein (Fragment) n=1 Tax=Verruco... [more]
A0A2G4FQV0_9PLAN1.340e-8166.86EF-hand domain-containing protein n=1 Tax=Planctom... [more]
A0A2H6AFP9_9BACT1.390e-8065.71EF-hand domain-containing protein n=1 Tax=bacteriu... [more]
A0A2V5XVV7_9BACT1.810e-8064.00Uncharacterized protein (Fragment) n=1 Tax=Verruco... [more]
A0A2V9R4N9_9BACT2.240e-8064.57Uncharacterized protein (Fragment) n=1 Tax=Acidoba... [more]
A0A8J7Q6W0_9BACT2.840e-8065.71CehA/McbA family metallohydrolase n=1 Tax=Zavarzin... [more]
A0A7V1Z7D0_9BACT7.460e-8066.29EF-hand domain-containing protein n=1 Tax=Gemmatac... [more]
A0A7V8VDR1_9BACT1.730e-7965.14CehA/McbA family metallohydrolase n=2 Tax=Gemmatac... [more]
UPI001260BBEB2.370e-7864.00CehA/McbA family metallohydrolase n=2 Tax=Tautonia... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig54972contigP-wetherbeei_contig54972:3..527 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1210884.HG799462_gene7825
Model size525
Max annot lvl203682|Planctomycetes
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.33e-74
EggNOG OGsCOG0613@1|root,COG0613@2|Bacteria,2IY27@203682|Planctomycetes
DescriptionPHP domain protein
Cds size525
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186819.750325-CDS-P-wetherbeei_contig54972:2..5271683186819.750325-CDS-P-wetherbeei_contig54972:2..527Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig54972 3..527 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig54972.1.1prot_P-wetherbeei_contig54972.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig54972 3..527 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig54972.1.1

>prot_P-wetherbeei_contig54972.1.1 ID=prot_P-wetherbeei_contig54972.1.1|Name=mRNA_P-wetherbeei_contig54972.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=175bp
LFEIHPAVEVQLFTTDVDGTPTTGRYTFKDKAGRVYPPKAKRLAPDFFFQ
DQVYRHNGDSVLLPPGELTMVAGRGPEYLMEERKVTVPAQGPASIQVALK
RWINPVDYGYYSGDHHIHAAGCSHYTNPTEGVLAEDMFLHVKGEGLHVGC
NLTWGPCYDYQRQFFEPTANAVSEP
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mRNA from alignment at P-wetherbeei_contig54972:3..527-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig54972.1.1 ID=mRNA_P-wetherbeei_contig54972.1.1|Name=mRNA_P-wetherbeei_contig54972.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=525bp|location=Sequence derived from alignment at P-wetherbeei_contig54972:3..527- (Phaeothamnion wetherbeei SAG_119_79)
CTGTTTGAGATCCATCCCGCGGTGGAAGTTCAACTGTTCACGACCGATGT GGACGGCACGCCGACGACTGGCCGGTACACCTTCAAGGACAAGGCGGGCC GGGTCTATCCGCCCAAGGCCAAGCGCCTGGCCCCGGACTTTTTCTTTCAG GATCAGGTTTACCGCCACAACGGTGACAGTGTGCTGTTGCCGCCTGGCGA GTTGACGATGGTTGCCGGGCGCGGGCCGGAATATCTGATGGAGGAGCGCA AGGTGACCGTGCCCGCGCAGGGGCCTGCCTCGATCCAGGTTGCGCTCAAG CGCTGGATCAACCCGGTGGATTACGGCTACTACAGCGGCGACCACCATAT TCACGCGGCCGGCTGCTCTCACTACACCAACCCAACGGAAGGTGTGCTGG CCGAGGATATGTTCTTGCATGTGAAGGGCGAGGGGCTGCATGTCGGTTGC AACCTGACCTGGGGCCCCTGTTACGACTATCAGCGGCAGTTCTTCGAGCC AACGGCCAACGCGGTGAGCGAGCCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig54972:3..527-

>mRNA_P-wetherbeei_contig54972.1.1 ID=mRNA_P-wetherbeei_contig54972.1.1|Name=mRNA_P-wetherbeei_contig54972.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=525bp|location=Sequence derived from alignment at P-wetherbeei_contig54972:3..527- (Phaeothamnion wetherbeei SAG_119_79)
CTGTTTGAGATCCATCCCGCGGTGGAAGTTCAACTGTTCACGACCGATGT
GGACGGCACGCCGACGACTGGCCGGTACACCTTCAAGGACAAGGCGGGCC
GGGTCTATCCGCCCAAGGCCAAGCGCCTGGCCCCGGACTTTTTCTTTCAG
GATCAGGTTTACCGCCACAACGGTGACAGTGTGCTGTTGCCGCCTGGCGA
GTTGACGATGGTTGCCGGGCGCGGGCCGGAATATCTGATGGAGGAGCGCA
AGGTGACCGTGCCCGCGCAGGGGCCTGCCTCGATCCAGGTTGCGCTCAAG
CGCTGGATCAACCCGGTGGATTACGGCTACTACAGCGGCGACCACCATAT
TCACGCGGCCGGCTGCTCTCACTACACCAACCCAACGGAAGGTGTGCTGG
CCGAGGATATGTTCTTGCATGTGAAGGGCGAGGGGCTGCATGTCGGTTGC
AACCTGACCTGGGGCCCCTGTTACGACTATCAGCGGCAGTTCTTCGAGCC
AACGGCCAACGCGGTGAGCGAGCCG
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