mRNA_P-wetherbeei_contig5493.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5493.2.1 vs. uniprot
Match: A0A2D2DHJ0_9BURK (Short-chain dehydrogenase n=9 Tax=Massilia TaxID=149698 RepID=A0A2D2DHJ0_9BURK) HSP 1 Score: 274 bits (701), Expect = 7.860e-87 Identity = 148/253 (58.50%), Postives = 181/253 (71.54%), Query Frame = 3
Query: 558 LNPPVASFKGLRVWVVGASTGIGAATARRLLSEGATVAVSSRSHDALAAAFHGRARVVAL--DVTDAAALRAAAEELAAAWGGIDLVLAVAGTYQAMRAWEIDLAQTDRIIDVNLRGVLNLFAAVQPVLVKQGSGGFGIVASVAGYGGLPNSLAYGATKAACINLAQSLYLDLAARGVAVYLVTPGFVETPLTAKNTFPMPFLIGADEAADRIVTGIARGDFEIHFPRAFSLLLKAVNLLPHRLYFWCVRKFT 1310
+NP V +++G RVW++GASTGIG A A LL GA VA S+RS D L G +AL DVTD A++ AA + + AAWGGIDLVL VAG Y MRA IDLA +++ID+NLRG N P+L+KQG+GG GIVASVAGYGGLP +L YG TKAA INL++SLYLDL ARG+AVY + PGFV+TPLTAKN F MP L+ A +AA +V GI RGDF IHFPR F+ ++ LLP+RLYFW + K T
Sbjct: 1 MNPRVKAWRGRRVWMIGASTGIGEAAAHLLLDLGARVAFSARSADKLEQTVAGEPHALALPLDVTDRASVDAACQRIVAAWGGIDLVLIVAGGYNEMRADAIDLAAANQMIDLNLRGAFNCLDVALPLLIKQGAGGIGIVASVAGYGGLPKALVYGPTKAALINLSESLYLDLRARGIAVYQINPGFVDTPLTAKNDFKMPALMSAADAAYAMVEGIERGDFHIHFPRRFTNSMRLARLLPYRLYFWLIHKVT 253
BLAST of mRNA_P-wetherbeei_contig5493.2.1 vs. uniprot
Match: A0A2G8TH32_9BURK (Short-chain dehydrogenase n=1 Tax=Massilia eurypsychrophila TaxID=1485217 RepID=A0A2G8TH32_9BURK) HSP 1 Score: 273 bits (699), Expect = 1.570e-86 Identity = 146/253 (57.71%), Postives = 182/253 (71.94%), Query Frame = 3
Query: 558 LNPPVASFKGLRVWVVGASTGIGAATARRLLSEGATVAVSSRSHDALAAAFHGRARVVAL--DVTDAAALRAAAEELAAAWGGIDLVLAVAGTYQAMRAWEIDLAQTDRIIDVNLRGVLNLFAAVQPVLVKQGSGGFGIVASVAGYGGLPNSLAYGATKAACINLAQSLYLDLAARGVAVYLVTPGFVETPLTAKNTFPMPFLIGADEAADRIVTGIARGDFEIHFPRAFSLLLKAVNLLPHRLYFWCVRKFT 1310
+NP + S+ G RVW++GASTGIGAA A RLL +GA VA+S+R+ L AA G +AL DVTD A++ AA + + AAWGGIDLVL VAG Y MRA DLA + ++D+NLRG N AV PVL++QG+GG GIVASVAG+GGLP +L YG TKAA INLA+SLYLDL RG+AVY + PGFV+TPLTA N FPMP +I ADEAA ++ GI G F +HFPR F+ ++ LLP+R YFW + K T
Sbjct: 1 MNPRIDSWSGKRVWMIGASTGIGAAAAARLLRQGARVALSARNAARLDAAAAGSQNALALPLDVTDHASVLAARDAIVAAWGGIDLVLVVAGGYNEMRADSFDLAAANAMVDLNLRGAFNCLDAVLPVLLRQGAGGIGIVASVAGFGGLPKALVYGPTKAALINLAESLYLDLRPRGIAVYQINPGFVDTPLTAHNDFPMPAIISADEAAAAMLKGIEHGQFHVHFPRRFTNSMRLARLLPYRAYFWLIHKVT 253
BLAST of mRNA_P-wetherbeei_contig5493.2.1 vs. uniprot
Match: A0A3N5WK62_9PROT (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5WK62_9PROT) HSP 1 Score: 272 bits (695), Expect = 6.950e-86 Identity = 151/254 (59.45%), Postives = 183/254 (72.05%), Query Frame = 3
Query: 558 LNPPVASFKGLRVWVVGASTGIGAATARRLLSEGATVAVSSRSHDAL--AAAFHGR-ARVVALDVTDAAALRAAAEELAAAWGGIDLVLAVAGTYQAMRAWEIDLAQTDRIIDVNLRGVLNLFAAVQPVLVKQGSGGFGIVASVAGYGGLPNSLAYGATKAACINLAQSLYLDLAARGVAVYLVTPGFVETPLTAKNTFPMPFLIGADEAADRIVTGIARGDFEIHFPRAFSLLLKAVNLLPHRLYFWCVRKFT 1310
LNPP+ ++G+RVW++GAS+GIGAA + LL+ GA VA+S+RS L AAA HG A + LDVTDAAA+ A + L AWGGID VL AG++Q RAWE D R++DVNL GVLN AV L++Q GG IV+SVAGYGGLP SL YGATKAA INL ++LYLDLA RG+ VYL+ PGFV+TPLT +NTF MP LI ADEAA I+ G+ARG FEIHFPR F+ LK + LLP+R YF V K T
Sbjct: 3 LNPPLRDWRGVRVWIIGASSGIGAAVGQSLLARGARVALSARSRPQLERAAAPHGDDALALPLDVTDAAAVGPALQRLVDAWGGIDFVLLCAGSHQPARAWEFDADAARRLVDVNLNGVLNCLPAVVQQLLRQQCGGIAIVSSVAGYGGLPTSLVYGATKAALINLTETLYLDLAPRGIGVYLINPGFVKTPLTDRNTFRMPALISADEAAAEILAGLARGRFEIHFPRRFTRWLKLLRLLPYRWYFALVHKGT 256
BLAST of mRNA_P-wetherbeei_contig5493.2.1 vs. uniprot
Match: A0A239CI76_9BURK (Short-chain dehydrogenase n=1 Tax=Noviherbaspirillum humi TaxID=1688639 RepID=A0A239CI76_9BURK) HSP 1 Score: 270 bits (691), Expect = 2.520e-85 Identity = 145/253 (57.31%), Postives = 182/253 (71.94%), Query Frame = 3
Query: 558 LNPPVASFKGLRVWVVGASTGIGAATARRLLSEGATVAVSSRSHDALAA--AFHGRARVVALDVTDAAALRAAAEELAAAWGGIDLVLAVAGTYQAMRAWEIDLAQTDRIIDVNLRGVLNLFAAVQPVLVKQGSGGFGIVASVAGYGGLPNSLAYGATKAACINLAQSLYLDLAARGVAVYLVTPGFVETPLTAKNTFPMPFLIGADEAADRIVTGIARGDFEIHFPRAFSLLLKAVNLLPHRLYFWCVRKFT 1310
+NP + S++G RVW++GAS+GIGA TARRL+ GA VAVS+RS AL A A +A + LD+TD A + AA + L A W GIDL L VAG Y MRA DLA R++D+NL GVL+ A+ PVL++QG+GG GIV+SVAGY GLP +L YG TKAA INLA+SLYLDLA RG++VYL+ PGFV+TPLTAKN FPMP L+ +AAD ++ GI G F IHFPR F+ L+ LLP+R YFW + K T
Sbjct: 1 MNPRIGSWRGRRVWIIGASSGIGADTARRLMQAGARVAVSARSAPALQALAALDAQAMALPLDITDHATVLAARDALLAEWQGIDLTLVVAGGYVDMRADSFDLAAAKRLVDLNLGGVLHCLDAILPVLLRQGTGGIGIVSSVAGYSGLPRALVYGPTKAALINLAESLYLDLAPRGISVYLINPGFVDTPLTAKNDFPMPALMTPADAADALLRGIEAGRFHIHFPRRFTNWLRLARLLPYRAYFWLIHKVT 253
BLAST of mRNA_P-wetherbeei_contig5493.2.1 vs. uniprot
Match: UPI001C637F95 (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Massilia sp. PAMC28688 TaxID=2861283 RepID=UPI001C637F95) HSP 1 Score: 270 bits (691), Expect = 2.520e-85 Identity = 150/253 (59.29%), Postives = 178/253 (70.36%), Query Frame = 3
Query: 558 LNPPVASFKGLRVWVVGASTGIGAATARRLLSEGATVAVSSRSHDALAA--AFHGRARVVALDVTDAAALRAAAEELAAAWGGIDLVLAVAGTYQAMRAWEIDLAQTDRIIDVNLRGVLNLFAAVQPVLVKQGSGGFGIVASVAGYGGLPNSLAYGATKAACINLAQSLYLDLAARGVAVYLVTPGFVETPLTAKNTFPMPFLIGADEAADRIVTGIARGDFEIHFPRAFSLLLKAVNLLPHRLYFWCVRKFT 1310
+NP + + G RVWV+GASTGIG ATA L+ GA VA S+RS D L A A RA + LDVTD A++ A + L A WGGIDLVL VAG Y MRA DLA +ID+NLRGV N A V PVL++QGSGG GIV+SVAGY GLP +L YG TKAA INLA+SLYLDL RG+AVY + PGFV+TPLT N F MP L+ A EAA+++V GI RG F IHFPR F+ L+ LLP+RLYFW +RK T
Sbjct: 1 MNPGIDDWAGKRVWVIGASTGIGEATAHLLVDGGALVAFSARSLDKLLATTASAPRALALPLDVTDPASVAAVCQRLVAQWGGIDLVLVVAGGYNEMRADSFDLAAAHGLIDLNLRGVFNCLAPVLPVLLRQGSGGIGIVSSVAGYSGLPKALVYGPTKAALINLAESLYLDLHPRGIAVYQICPGFVDTPLTRNNDFRMPSLMTAQEAAEQLVAGIERGHFHIHFPRRFTNGLRLARLLPYRLYFWLIRKVT 253
BLAST of mRNA_P-wetherbeei_contig5493.2.1 vs. uniprot
Match: UPI00140A4C35 (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Duganella aceris TaxID=2703883 RepID=UPI00140A4C35) HSP 1 Score: 270 bits (690), Expect = 3.330e-85 Identity = 144/253 (56.92%), Postives = 180/253 (71.15%), Query Frame = 3
Query: 558 LNPPVASFKGLRVWVVGASTGIGAATARRLLSEGATVAVSSRSHDALAAAFHGRARVVALDVTDAAALRAAAEELAAAWGGIDLVLAVAGTYQAMRAWEIDLAQTDRIIDVNLRGVLNLFAAVQPVLVKQGSGGFGIVASVAGYGGLPNSLAYGATKAACINLAQSLYLDLAARGVAVYLVTPGFVETPLTAKNTFPMPFLIGADEAADRIVTGIARGDFEIHFPRAFSLLLKAVNLLPHRLYFWCVRKFTRM 1316
+NP V S+ G VW++GASTGIGAATA L S+GA VA+S+R AL R +ALDVTD A++ AA + + AAW IDLVL VAG Y MRA DLA +R+ID+NLRGV N AV P+L+K+GSGG GIV SVAGYGGLP +L YG TKAA INL +SLY DL +G+AVY + PGFV+TPLT N FPMP L+ A +AA +++ G+ RG+F IHFPR F+ L+ LLP+RLYFW + K TR+
Sbjct: 1 MNPVVGSWAGKYVWIIGASTGIGAATANELQSKGAQVAISARRQAALEELSQSRMLPLALDVTDHASVLAARDAILAAWPRIDLVLLVAGGYNEMRADSFDLAAANRLIDLNLRGVFNCLDAVLPMLLKRGSGGIGIVGSVAGYGGLPKALVYGPTKAALINLTESLYFDLRPKGIAVYQINPGFVDTPLTKGNDFPMPELMTAPDAAHQLIRGMERGEFHIHFPRKFTNSLRLARLLPYRLYFWLIAKVTRL 253
BLAST of mRNA_P-wetherbeei_contig5493.2.1 vs. uniprot
Match: A0A6N9R2S7_9RHOO (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Aromatoleum sp. TaxID=2307007 RepID=A0A6N9R2S7_9RHOO) HSP 1 Score: 268 bits (685), Expect = 2.450e-84 Identity = 149/259 (57.53%), Postives = 182/259 (70.27%), Query Frame = 3
Query: 540 MPLLRPLNPPVASFKGLRVWVVGASTGIGAATARRLLSEGATVAVSSRSHDALAAAFHG--RARVVALDVTDAAALRAAAEELAAAWGGIDLVLAVAGTYQAMRAWEIDLAQTDRIIDVNLRGVLNLFAAVQPVLVKQGSGGFGIVASVAGYGGLPNSLAYGATKAACINLAQSLYLDLAARGVAVYLVTPGFVETPLTAKNTFPMPFLIGADEAADRIVTGIARGDFEIHFPRAFSLLLKAVNLLPHRLYFWCVRKFT 1310
M L PLNP +A + +RVWV+GAS GIGAATA+ LL GA VA+S+RS D L A G RA + LD T + + AA E + A WGG DLVL VAGT++ +RAWE++ A+ D +++VNL G + AAV P L+ QG+G GIV+SVAGY GLP +L YGA+KA IN ++LYLDL RG VYL+ PGFV TPLT KN F MP LI ADEAA I+ GI RGDFEIHFPRAF+ LK + LLP+RLYF VRK T
Sbjct: 1 MGLFAPLNPLLAPWPRVRVWVIGASYGIGAATAQELLRAGARVAISARSEDKLRAVAAGDPRALIAPLDFTQGSDVAAAWERIRAEWGGCDLVLIVAGTHKEIRAWELNEAEADALLEVNLNGPIATVAAVLPGLLAQGTGAIGIVSSVAGYRGLPKALIYGASKAGLINFTETLYLDLQPRGFGVYLINPGFVATPLTEKNQFNMPHLITADEAAQEIIAGIERGDFEIHFPRAFTRQLKFLRLLPYRLYFAAVRKAT 259
BLAST of mRNA_P-wetherbeei_contig5493.2.1 vs. uniprot
Match: Q7NT37_CHRVO (Uncharacterized protein n=2 Tax=Chromobacterium group TaxID=90153 RepID=Q7NT37_CHRVO) HSP 1 Score: 274 bits (700), Expect = 3.320e-84 Identity = 187/405 (46.17%), Postives = 232/405 (57.28%), Query Frame = 3
Query: 78 GSLRGREAGARPVPLLRRHG*RLGILRRPLGPRGQALHRCDPRSRRGRPSHPRRGLQLFGRHALEADLGHRAGRAGPLFGHCWRCRWRRRGRLGRQCAALDVRVGPRRRRQDLSCRL*RLDVPPGRGGNVEPLDDEQVRLSPRRIVPIVPEAPLMPLLRPLNPPVASFKGLRVWVVGASTGIGAATARRLLSEGATVAVSSRSHDA---LAAAFHGRARVVALDVTDAAALRAAAEELAAAWGGIDLVLAVAGTYQAMRAWEIDLAQTDRIIDVNLRGVLNLFAAVQPVLVKQGSGGFGIVASVAGYGGLPNSLAYGATKAACINLAQSLYLDLAARGVAVYLVTPGFVETPLTAKNTFPMPFLIGADEAADRIVTGIARGDFEIHFPRAFSLLLKAVNLLPHRL 1283
G LR + A P P R LG + P PRGQALHR R GR + R L L R A + +A R PL RC R R R GRQ AAL + RQ + + RLDVP GR +P DDEQVRL P R ++P+A + LNP +A ++ RVWV+GAS+GIGAA A LL GA V +S+R + LAA G ARV LDVTD AA +AA L AA D V+ A Y+ ++ +T R++D NL GV + V P L +QG GG +VASVAGY GLP ++ YG KAA INLA+ LY +L RGVAVYL+ PGFV TPLTAKN F MP L+ +AA I+ G+ RG FEIHFP F++ LK + LLP+RL
Sbjct: 24 GRLRRQSPAAGPWPFFPRQDRGLGHVPGPARPRGQALHRGHGRRTPGRGAGADRALPLQRRQPPAARMAAQAHRRRPLARPGRRCGRRGRRRDGRQRAALALHAEAAGGRQTVPGAVRRLDVPAGRAQPAQPDDDEQVRLPPGRSHAVLPQAGGQAMTLRLNPAIADWRARRVWVIGASSGIGAALADELLQAGAEVILSARRAEPMRMLAAGCPG-ARVETLDVTDPAAWQAAWSHLEAAGALPDFVVFCAADYRPQTCLDLYAEETRRLLDTNLLGVYHGLEVVLPTLARQGRGGVALVASVAGYAGLPGAVVYGPGKAALINLAEILYTELRPRGVAVYLINPGFVATPLTAKNHFTMPALLTPRQAARHIMRGLERGAFEIHFPLRFTVWLKLLRLLPYRL 427
BLAST of mRNA_P-wetherbeei_contig5493.2.1 vs. uniprot
Match: A0A1I4N1X5_9BURK (Short-chain dehydrogenase n=1 Tax=Rugamonas rubra TaxID=758825 RepID=A0A1I4N1X5_9BURK) HSP 1 Score: 266 bits (679), Expect = 1.610e-83 Identity = 145/255 (56.86%), Postives = 178/255 (69.80%), Query Frame = 3
Query: 558 LNPPVASFKGLRVWVVGASTGIGAATARRLLSEGATVAVSSRSHDALAAAFHGR--ARVVALDVTDAAALRAAAEELAAAWGGIDLVLAVAGTYQAMRAWEIDLAQTDRIIDVNLRGVLNLFAAVQPVLVKQGSGGFGIVASVAGYGGLPNSLAYGATKAACINLAQSLYLDLAARGVAVYLVTPGFVETPLTAKNTFPMPFLIGADEAADRIVTGIARGDFEIHFPRAFSLLLKAVNLLPHRLYFWCVRKFTRM 1316
+NPP+ ++G VW++GAS+GIGAATAR LL GA VA+S+R DAL G A + LDVTD A++R A E L AW +DLVL VAG Y MRA DLA + +ID+NLRGV N V P+L++QG GG GIVASVAGYGGLP +L YG TKAA INL++SLY DL +G+AVY + PGFV+TPLTA N F MP L+ D AA ++ GI RG F IHFPR FS L+ LLP+RLYFW +RK TR+
Sbjct: 1 MNPPLDDWRGRHVWIIGASSGIGAATARLLLERGAHVALSARRRDALEQVAAGAPLALLAPLDVTDHASVRGARELLLTAWPRLDLVLLVAGGYNEMRADSFDLAAANALIDLNLRGVYNCLDLVLPLLLRQGGGGLGIVASVAGYGGLPKALVYGPTKAALINLSESLYFDLRPKGIAVYQINPGFVDTPLTAANDFAMPALMQPDAAARALLRGIERGQFHIHFPRRFSNSLRLARLLPYRLYFWLLRKVTRL 255
BLAST of mRNA_P-wetherbeei_contig5493.2.1 vs. uniprot
Match: A0A2U2HGR5_9BURK (Short-chain dehydrogenase n=1 Tax=Massilia glaciei TaxID=1524097 RepID=A0A2U2HGR5_9BURK) HSP 1 Score: 265 bits (676), Expect = 4.540e-83 Identity = 142/253 (56.13%), Postives = 179/253 (70.75%), Query Frame = 3
Query: 558 LNPPVASFKGLRVWVVGASTGIGAATARRLLSEGATVAVSSRSHDAL--AAAFHGRARVVALDVTDAAALRAAAEELAAAWGGIDLVLAVAGTYQAMRAWEIDLAQTDRIIDVNLRGVLNLFAAVQPVLVKQGSGGFGIVASVAGYGGLPNSLAYGATKAACINLAQSLYLDLAARGVAVYLVTPGFVETPLTAKNTFPMPFLIGADEAADRIVTGIARGDFEIHFPRAFSLLLKAVNLLPHRLYFWCVRKFT 1310
+NP + +KG RVW++GASTGIG A + LL GA VA S+R + L AA RA +ALDVTD ++ A + L AAWGGIDLVL VAG Y MRA DLAQ ++++D+NLRGV N AV P L+KQG+GG GIVASVAG+GGLP +L YG TKAA INL++SLYLDL RG+ VY + PGFV+TPLTAKN F MP L+ A++A ++ GI RG F IHFP+ F+ ++ LLP+ LYFW +RK T
Sbjct: 1 MNPKIGDWKGKRVWLIGASTGIGEAAGQYLLELGAQVAFSARRIEVLERVAAGSTRAFPIALDVTDPGSVARACKTLVAAWGGIDLVLVVAGGYNEMRADSFDLAQANKMLDLNLRGVFNCLDAVLPQLLKQGAGGIGIVASVAGFGGLPKALVYGPTKAALINLSESLYLDLHPRGIGVYQINPGFVDTPLTAKNDFHMPALMSAEDAGAAMIDGIERGQFHIHFPKRFTNSMRLARLLPYPLYFWLIRKVT 253 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5493.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5493.2.1 >prot_P-wetherbeei_contig5493.2.1 ID=prot_P-wetherbeei_contig5493.2.1|Name=mRNA_P-wetherbeei_contig5493.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=260bp MPLLRPLNPPVASFKGLRVWVVGASTGIGAATARRLLSEGATVAVSSRSHback to top mRNA from alignment at P-wetherbeei_contig5493:1341..2659+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5493.2.1 ID=mRNA_P-wetherbeei_contig5493.2.1|Name=mRNA_P-wetherbeei_contig5493.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1319bp|location=Sequence derived from alignment at P-wetherbeei_contig5493:1341..2659+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5493:1341..2659+ >mRNA_P-wetherbeei_contig5493.2.1 ID=mRNA_P-wetherbeei_contig5493.2.1|Name=mRNA_P-wetherbeei_contig5493.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=780bp|location=Sequence derived from alignment at P-wetherbeei_contig5493:1341..2659+ (Phaeothamnion wetherbeei SAG_119_79)back to top |