mRNA_P-wetherbeei_contig549.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig549.2.1
Unique NamemRNA_P-wetherbeei_contig549.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig549.2.1 vs. uniprot
Match: D8LIX4_ECTSI (Probable methionone aminopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIX4_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 2.670e-42
Identity = 70/110 (63.64%), Postives = 80/110 (72.73%), Query Frame = 1
Query:    1 RPGACLTEIGGAVHDVADASGFGTVRDYCGHGIARDFHIPPNVFHCRNDMKMELLPGMIFTIEPILTESRSARVLVWRDKWTVATRDGGRAAQFEHCVLVTEGAPEILTV 330
            RPGACLTEIG A+H VAD  GF TVR YCGHG+   FH+ P V H RN+ ++E++PGM FTIEPI TE   A  L W D WTV T DGGRAAQFEH VL+TE   E+LTV
Sbjct:   73 RPGACLTEIGSAIHAVADRYGFDTVRKYCGHGVGSSFHMLPFVEHFRNNRRLEMVPGMTFTIEPIFTEGSEATTL-WPDAWTVQTVDGGRAAQFEHVVLITEEGHEVLTV 181          
BLAST of mRNA_P-wetherbeei_contig549.2.1 vs. uniprot
Match: A0A1E7ERF1_9STRA (Creatinase/aminopeptidase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ERF1_9STRA)

HSP 1 Score: 144 bits (362), Expect = 2.030e-40
Identity = 70/109 (64.22%), Postives = 81/109 (74.31%), Query Frame = 1
Query:    4 PGACLTEIGGAVHDVADASGFGTVRDYCGHGIARDFHIPPNVFHCRNDMKMELLPGMIFTIEPILTESRSARVLVWRDKWTVATRDGGRAAQFEHCVLVTEGAPEILTV 330
            PG+CLT+IG AV DVAD+ G+ TV  Y GHGI+ DFH PP V H RND K+EL+PGMIFTIEP+L E  +     W D+WTVAT DGG AAQFEH VL+TE   EILTV
Sbjct:  158 PGSCLTDIGAAVQDVADSYGYSTVEKYRGHGISSDFHRPPFVKHYRNDDKLELVPGMIFTIEPMLVEG-AGECFEWSDQWTVATTDGGMAAQFEHTVLITESGVEILTV 265          
BLAST of mRNA_P-wetherbeei_contig549.2.1 vs. uniprot
Match: A0A7S2PRI4_9STRA (Methionine aminopeptidase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PRI4_9STRA)

HSP 1 Score: 142 bits (357), Expect = 5.070e-40
Identity = 67/110 (60.91%), Postives = 85/110 (77.27%), Query Frame = 1
Query:    1 RPGACLTEIGGAVHDVADASGFGTVRDYCGHGIARDFHIPPNVFHCRNDMKMELLPGMIFTIEPILTESRSARVLVWRDKWTVATRDGGRAAQFEHCVLVTEGAPEILTV 330
            RPGACLT++G A+H V D  G+ TVR+Y GHGIA +FH  P V H RN+ K++L PGMIFTIEP++TE+++  VL W D WTVAT+DGGRAAQFE  VL+T+   EILT+
Sbjct:  126 RPGACLTDVGAAIHQVCDRYGYDTVREYRGHGIASEFHCAPFVKHFRNNDKLKLQPGMIFTIEPMVTENKADNVL-WEDGWTVATKDGGRAAQFEDTVLITDTGVEILTL 234          
BLAST of mRNA_P-wetherbeei_contig549.2.1 vs. uniprot
Match: B8C096_THAPS (Methionine aminopeptidase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C096_THAPS)

HSP 1 Score: 141 bits (355), Expect = 1.510e-39
Identity = 68/110 (61.82%), Postives = 81/110 (73.64%), Query Frame = 1
Query:    1 RPGACLTEIGGAVHDVADASGFGTVRDYCGHGIARDFHIPPNVFHCRNDMKMELLPGMIFTIEPILTESRSARVLVWRDKWTVATRDGGRAAQFEHCVLVTEGAPEILTV 330
            +PG CL++IG A+H VADA G+ TVR Y GHGI+ DFH  P V H RN+  MEL+PGMIFTIEP+LTE   A    W D WTV T+DGGRAAQFEH VL+T+   E+LTV
Sbjct:  142 KPGGCLSDIGSAIHAVADAYGYDTVRHYRGHGISSDFHCAPYVKHYRNNEGMELIPGMIFTIEPMLTEGM-AECDEWSDNWTVVTKDGGRAAQFEHTVLITDTGVEVLTV 250          
BLAST of mRNA_P-wetherbeei_contig549.2.1 vs. uniprot
Match: A0A7S4EPP3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EPP3_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.450e-37
Identity = 68/109 (62.39%), Postives = 79/109 (72.48%), Query Frame = 1
Query:    4 PGACLTEIGGAVHDVADASGFGTVRDYCGHGIARDFHIPPNVFHCRNDMKMELLPGMIFTIEPILTESRSARVLVWRDKWTVATRDGGRAAQFEHCVLVTEGAPEILTV 330
            PG+CLT+IG AV DVAD+ G+ TV  Y GHGI  DFH PP V H RN+ K+ELLPGM+FTIEP+L E  +     W DKWTVAT DGG AAQFEH +L+ E   EILTV
Sbjct:  305 PGSCLTDIGAAVQDVADSYGYSTVEKYRGHGIGADFHRPPFVRHNRNNEKLELLPGMVFTIEPMLVEG-AGDCFEWSDKWTVATSDGGMAAQFEHTILIREDGVEILTV 412          
BLAST of mRNA_P-wetherbeei_contig549.2.1 vs. uniprot
Match: A0A7S1D638_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D638_CYCTE)

HSP 1 Score: 130 bits (327), Expect = 7.690e-37
Identity = 64/109 (58.72%), Postives = 76/109 (69.72%), Query Frame = 1
Query:    4 PGACLTEIGGAVHDVADASGFGTVRDYCGHGIARDFHIPPNVFHCRNDMKMELLPGMIFTIEPILTESRSARVLVWRDKWTVATRDGGRAAQFEHCVLVTEGAPEILTV 330
            PG+CL+ IG A+HD+AD+ G+ TV+ Y GHGIA  FH PP V H RN  K+ L PGMIFTIEP+LTE   +    W D WTV T DG  AAQFEH VL+TE   EILT+
Sbjct:   18 PGSCLSSIGSAIHDIADSYGYDTVQKYRGHGIADVFHCPPFVKHFRNTDKLTLEPGMIFTIEPMLTEGEGS-CREWADDWTVVTIDGSLAAQFEHTVLITEDGAEILTI 125          
BLAST of mRNA_P-wetherbeei_contig549.2.1 vs. uniprot
Match: F0Y974_AURAN (Methionine aminopeptidase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y974_AURAN)

HSP 1 Score: 134 bits (338), Expect = 1.670e-36
Identity = 67/110 (60.91%), Postives = 76/110 (69.09%), Query Frame = 1
Query:    1 RPGACLTEIGGAVHDVADASGFGTVRDYCGHGIARDFHIPPNVFHCRNDMKMELLPGMIFTIEPILTESRSARVLVWRDKWTVATRDGGRAAQFEHCVLVTEGAPEILTV 330
            +PGACLT IG A  D A    +G VR YCGHGI R FH PP V HCRN     L+PG +FTIEP+LTE RS  + V  D WTV TRDGGRAAQFEH VLVT+   E+LT+
Sbjct:  187 KPGACLTAIGDACADAAATRDYGVVRQYCGHGIGRVFHAPPLVQHCRNRDAFTLVPGHVFTIEPMLTE-RSPELYVADDGWTVVTRDGGRAAQFEHTVLVTDDGHEVLTL 295          
BLAST of mRNA_P-wetherbeei_contig549.2.1 vs. uniprot
Match: A0A7S2W584_9STRA (Methionine aminopeptidase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W584_9STRA)

HSP 1 Score: 136 bits (342), Expect = 3.050e-36
Identity = 68/111 (61.26%), Postives = 77/111 (69.37%), Query Frame = 1
Query:    1 RPGACLTEIGGAVHDVADASGFGTVRDYCGHGIARDFHIPPNVFHCRNDMKMELLPGMIFTIEPILTESRSARVLVW-RDKWTVATRDGGRAAQFEHCVLVTEGAPEILTV 330
            RPG+CLT +G A+HDVADA G+ TVR Y GHGI   FH PP V H RN   +EL  GMIFTIEP+LTE  +     W  D WTV T DGGRAAQFEH VL+T+   EILTV
Sbjct:  276 RPGSCLTHVGNAIHDVADAYGYDTVRKYRGHGIGSQFHCPPFVKHFRNSDYLELQEGMIFTIEPMLTEGDAQDCHEWLEDGWTVTTSDGGRAAQFEHTVLITKDGVEILTV 386          
BLAST of mRNA_P-wetherbeei_contig549.2.1 vs. uniprot
Match: A0A448ZAN6_9STRA (Peptidase_M24 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZAN6_9STRA)

HSP 1 Score: 135 bits (339), Expect = 1.070e-35
Identity = 67/109 (61.47%), Postives = 77/109 (70.64%), Query Frame = 1
Query:    4 PGACLTEIGGAVHDVADASGFGTVRDYCGHGIARDFHIPPNVFHCRNDMKMELLPGMIFTIEPILTESRSARVLVWRDKWTVATRDGGRAAQFEHCVLVTEGAPEILTV 330
            PG+CLT+IG AV DVAD+ G+ TV  Y GHGI  DFH PP V H RN  K+ELLPGM+FTIEP++ E  S     W D WTVAT DGG +AQFEH VL+ E   EILTV
Sbjct:  299 PGSCLTDIGAAVQDVADSYGYSTVAKYRGHGIGTDFHRPPFVKHYRNYDKLELLPGMVFTIEPMIVEGASD-CFEWSDHWTVATSDGGMSAQFEHTVLIKEDGVEILTV 406          
BLAST of mRNA_P-wetherbeei_contig549.2.1 vs. uniprot
Match: A0A7S2UT99_9STRA (Methionine aminopeptidase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UT99_9STRA)

HSP 1 Score: 130 bits (326), Expect = 2.310e-34
Identity = 64/109 (58.72%), Postives = 77/109 (70.64%), Query Frame = 1
Query:    4 PGACLTEIGGAVHDVADASGFGTVRDYCGHGIARDFHIPPNVFHCRNDMKMELLPGMIFTIEPILTESRSARVLVWRDKWTVATRDGGRAAQFEHCVLVTEGAPEILTV 330
            PG CL+ IG A+  VAD+ G+ +VR YCGHGI   FH+ P V H RND ++EL PGMIFTIEP++TE     VL   D WTV TRDG RAAQFEH VL+TE   E++TV
Sbjct:  227 PGKCLSSIGHAIEAVADSYGYQSVRAYCGHGIGTGFHMLPFVQHFRNDDRLELRPGMIFTIEPMITEGSQESVLA-EDNWTVYTRDGKRAAQFEHTVLITEDGVEVITV 334          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig549.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIX4_ECTSI2.670e-4263.64Probable methionone aminopeptidase n=1 Tax=Ectocar... [more]
A0A1E7ERF1_9STRA2.030e-4064.22Creatinase/aminopeptidase n=1 Tax=Fragilariopsis c... [more]
A0A7S2PRI4_9STRA5.070e-4060.91Methionine aminopeptidase n=1 Tax=Leptocylindrus d... [more]
B8C096_THAPS1.510e-3961.82Methionine aminopeptidase (Fragment) n=1 Tax=Thala... [more]
A0A7S4EPP3_9STRA1.450e-3762.39Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S1D638_CYCTE7.690e-3758.72Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
F0Y974_AURAN1.670e-3660.91Methionine aminopeptidase n=1 Tax=Aureococcus anop... [more]
A0A7S2W584_9STRA3.050e-3661.26Methionine aminopeptidase n=1 Tax=Eucampia antarct... [more]
A0A448ZAN6_9STRA1.070e-3561.47Peptidase_M24 domain-containing protein n=1 Tax=Ps... [more]
A0A7S2UT99_9STRA2.310e-3458.72Methionine aminopeptidase n=1 Tax=Fibrocapsa japon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig549contigP-wetherbeei_contig549:6671..7393 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LIX4
Preferred nameMAP1D
PFAMsPeptidase_M24
Model size345
Max annot lvl2759|Eukaryota
KEGG rclassRC00105
KEGG koko:K00029,ko:K01265
KEGG ReactionR00216
KEGG Pathwayko00620,ko00710,ko01100,ko01120,ko01200,map00620,map00710,map01100,map01120,map01200
KEGG ModuleM00169,M00172
Hectar predicted targeting categoryother localisation
GOsGO:0001101,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009507,GO:0009536,GO:0009719,GO:0009725,GO:0009737,GO:0009987,GO:0010033,GO:0019538,GO:0031365,GO:0033993,GO:0036211,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0071704,GO:0097305,GO:1901564,GO:1901700
Exons2
Evalue4.37e-43
EggNOG OGsCOG0024@1|root,KOG2738@2759|Eukaryota
Ec32 ortholog descriptionPeptidase M24, structural domain
Ec32 orthologEc-20_001930.1
EC1.1.1.40,3.4.11.18
Descriptionmetalloexopeptidase activity
Cds size345
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000,ko01002
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186818.8723092-CDS-P-wetherbeei_contig549:6670..68391683186818.8723092-CDS-P-wetherbeei_contig549:6670..6839Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig549 6671..6839 +
1683186818.8877394-CDS-P-wetherbeei_contig549:7217..73931683186818.8877394-CDS-P-wetherbeei_contig549:7217..7393Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig549 7218..7393 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig549.2.1prot_P-wetherbeei_contig549.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig549 6671..7393 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig549.2.1

>prot_P-wetherbeei_contig549.2.1 ID=prot_P-wetherbeei_contig549.2.1|Name=mRNA_P-wetherbeei_contig549.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=115bp
RPGACLTEIGGAVHDVADASGFGTVRDYCGHGIARDFHIPPNVFHCRNDM
KMELLPGMIFTIEPILTESRSARVLVWRDKWTVATRDGGRAAQFEHCVLV
TEGAPEILTVDHCQ*
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mRNA from alignment at P-wetherbeei_contig549:6671..7393+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig549.2.1 ID=mRNA_P-wetherbeei_contig549.2.1|Name=mRNA_P-wetherbeei_contig549.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=723bp|location=Sequence derived from alignment at P-wetherbeei_contig549:6671..7393+ (Phaeothamnion wetherbeei SAG_119_79)
AGGCCCGGCGCCTGCCTGACGGAGATCGGCGGGGCGGTGCACGACGTCGC GGACGCCAGCGGCTTCGGGACGGTGCGCGACTACTGCGGCCACGGCATCG CTCGGGACTTCCATATCCCGCCAAATGTCTTTCACTGCCGCAACGACATG AAGATGGAGCTGCTGCCAGGTGTGTCCTGTCTTCGCGGGACGGAGCAGAG CTTTCTGCGCCGCGTTTGACTAACATCGAGGCGTTTTTGCGTAGGCGGAA CGGAAAGTTTCCTGCGTCTCGCTTGATTCACACCTTCATATCCTTGGCTT TCCCTAAAGTCGTTGCGATAGCTTTCGAGCGGATTACGCTTGGCAGATGT TGATAAAAGCGGTGCCGTCGTCTCTATTCTTCGACTTTGATTTCTCTCTT TCTTCATTAGTCGGTTGCCCGCTTTATTCCTTCCGTGCTTTTGACGGTTG GGAAGTCATTTGCGCGCGTTTATTGCGAAAGAACTTCCTCGGTGAACCAA ATTGCACGCTCTCGCTTCCTTCCCTCTTCCACCTGTGTATACCCCAGGCA TGATCTTCACCATCGAGCCGATCCTGACGGAGAGCCGGTCGGCCAGGGTG CTGGTTTGGCGGGACAAATGGACGGTCGCCACGCGAGACGGCGGCCGTGC CGCTCAGTTTGAGCACTGCGTCCTCGTGACGGAGGGCGCTCCCGAGATCT TGACGGTTGACCACTGCCAATAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig549:6671..7393+

>mRNA_P-wetherbeei_contig549.2.1 ID=mRNA_P-wetherbeei_contig549.2.1|Name=mRNA_P-wetherbeei_contig549.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=345bp|location=Sequence derived from alignment at P-wetherbeei_contig549:6671..7393+ (Phaeothamnion wetherbeei SAG_119_79)
AGGCCCGGCGCCTGCCTGACGGAGATCGGCGGGGCGGTGCACGACGTCGC
GGACGCCAGCGGCTTCGGGACGGTGCGCGACTACTGCGGCCACGGCATCG
CTCGGGACTTCCATATCCCGCCAAATGTCTTTCACTGCCGCAACGACATG
AAGATGGAGCTGCTGCCAGGCATGATCTTCACCATCGAGCCGATCCTGAC
GGAGAGCCGGTCGGCCAGGGTGCTGGTTTGGCGGGACAAATGGACGGTCG
CCACGCGAGACGGCGGCCGTGCCGCTCAGTTTGAGCACTGCGTCCTCGTG
ACGGAGGGCGCTCCCGAGATCTTGACGGTTGACCACTGCCAATAA
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