mRNA_P-wetherbeei_contig5483.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5483.2.1
Unique NamemRNA_P-wetherbeei_contig5483.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5483.2.1 vs. uniprot
Match: D7FZN1_ECTSI (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZN1_ECTSI)

HSP 1 Score: 405 bits (1041), Expect = 3.580e-132
Identity = 229/408 (56.13%), Postives = 274/408 (67.16%), Query Frame = 1
Query:    1 DVSECLRTVFGHTGFRDGQAK--------------------------VTSLLLARQSCAAVFPTGLGKSLCYQLPAVLLARRGLGMTLVVSPLVALMKDQVEALQARGVACARLDGTLDAEQVQDTLKAAHSGDLALLYVSPERFNNERFLRMLSKSPVAVFVVDEAHCISEWGHNFRPDYLRLSEFARAAGAPLRLALTATATPKVAADMAERLAIPPDNVVRLLSHRPNLRLLSVLAPDGPEERFAFLAQRLRLPDRPQR---------PILVYVTLQATAEAAAAALVAEGFETRAYHAGMAAADREDVQNWFMQPRADGAQPVVVGTLAFGMGIDKSDIGGVYHLNLPRSLEEYAQGVGRSGRDGRPAVCEALVSPADVPILKALVYGNMPSPAAVAGLLEAVF 1119
            D  E LR++FGH  FRDGQAK                          V + LLA +SCA VFPTG GKS+CYQLP  L+AR+GLG+TLVVSPL+ALMKDQ +AL A GV CA+LD TL+A +V D  +   +G +ALLYVSPERFNNERF+R L    VA+FVVDEAHCISEWGHNFRPDYLRL++FA+AA A  RLALTATATPKVA D+A RL IPP NV R   +RP L L +V APD  EER   LA  L   +  Q+           +VYVTLQ TA   A AL A G + R YHAG+    RE+ Q+WFM    D   PVVVGT+AFGMG+DK ++  V+H NLPRS E+ AQ VGR+GRDG  A C  LVS AD+P+L++++YG  PS AAV GLL A+F
Sbjct:   44 DAREALRSLFGHDDFRDGQAKDQHSRRWYALVYKPGLSFQTSTKEEEVVAKLLAGESCAGVFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQTDALIAAGVPCAKLDSTLEAHEVYDIYEQIRAGSVALLYVSPERFNNERFVRTLKGIKVALFVVDEAHCISEWGHNFRPDYLRLADFAKAARANARLALTATATPKVAVDIANRLDIPPSNVNRTPFYRPMLTLGAVRAPDDQEERARLLADILLRGEHHQQGRGTAAGSGAAVVYVTLQKTAVEVAQALAAAGIDARPYHAGLPPLQREETQDWFMNA-PDDESPVVVGTIAFGMGLDKKNVRRVFHFNLPRSPEDLAQQVGRAGRDGERASCTTLVSAADLPVLRSMIYGGTPSEAAVRGLLRAIF 450          
BLAST of mRNA_P-wetherbeei_contig5483.2.1 vs. uniprot
Match: A0A835Z8G9_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G9_9STRA)

HSP 1 Score: 401 bits (1030), Expect = 7.830e-130
Identity = 235/425 (55.29%), Postives = 272/425 (64.00%), Query Frame = 1
Query:    1 DVSECLRTVFGHTGFRDGQAKVTSLLLARQSCAAVFPTGLGKSLCYQLPAVLLARRGLGMTLVVSPLVALMKDQVEALQARGVACARLDGTLDAEQVQDTLKAAHSGDLALLYVSPERFNNERF------------------------------------LRMLSKSPVAVFVVDEAHCISEWGHNFRPDYLRLSEFARAAGAPLRLALTATATPKVAADMAERLAIPPDNVVRLLSHRPNLRLLSVLAPDGPEERFAFLAQRLRLPDRPQRPILVYVTLQATAEAAAAALVAEGFETRAYHAGMAAADREDVQNWFMQPRADGAQP----------------VVVGTLAFGMGIDKSDIGGVYHLNLPRSLEEYAQGVGRSGRDGRPAVCEALVSPADVPILKALVYGNMPSPAAVAGLLEAVF 1119
            DV   L+  FG+  FRDGQ +V  LLL ++S AA+ PTG GKSLCYQLP ++LAR G G T+VVSPL+ALMKDQ +AL ARG+ CARLD +LDA   +D       G   LLYVSPERFNNERF                                    L  LSK+ VA+FVVDEAHCISEWGHNFRPDYLRL+ FARAAGA   LALTATATP+VAADM  RLAI   +VVR   HR  L L +  APD  EER A LA RLR   R     +VY  LQ TA  AAA L A G   RAYHAG+ AA+R+DVQ+WFM    +G                   VVVGT+AFGMG+DK D+  VYHLNLPRS+E Y Q VGR+GRDGRP++CEALVSPADVP L+A+VY N P  AAV GLL+ +F
Sbjct:   50 DVHAALKYYFGYDEFRDGQEEVVRLLLQQRSAAAILPTGAGKSLCYQLPGLVLARAGRGTTVVVSPLIALMKDQAQALAARGLPCARLDSSLDAAVARDAYDMVRRGRAGLLYVSPERFNNERFASAFKGALVHFARWAQLRTVERRGAAARARISSEAGLGALSKARVALFVVDEAHCISEWGHNFRPDYLRLAAFARAAGAAATLALTATATPRVAADMCARLAIAQHDVVRTPLHRAELALRAARAPDALEERVAALAARLRA--RAPGATIVYAMLQQTATDAAAMLTAAGIPARAYHAGLRAAERDDVQDWFMAGAGEGDVQGARARGGAGRWPDDARVVVGTIAFGMGLDKGDVRYVYHLNLPRSIEGYCQEVGRAGRDGRPSLCEALVSPADVPTLRAMVYSNTPGAAAVRGLLDTMF 472          
BLAST of mRNA_P-wetherbeei_contig5483.2.1 vs. uniprot
Match: UPI00193AF2E4 (RecQ family ATP-dependent DNA helicase n=1 Tax=Archangium violaceum TaxID=83451 RepID=UPI00193AF2E4)

HSP 1 Score: 360 bits (923), Expect = 4.690e-116
Identity = 202/370 (54.59%), Postives = 249/370 (67.30%), Query Frame = 1
Query:    7 SECLRTVFGHTGFRDGQAKVTSLLLARQSCAAVFPTGLGKSLCYQLPAVLLARRGLGMTLVVSPLVALMKDQVEALQARGVACARLDGTLDAEQVQDTLKAAHSGDLALLYVSPERFNNERFLRMLSKSPVAVFVVDEAHCISEWGHNFRPDYLRLSEFARAAGAPLRLALTATATPKVAADMAERLAIPPDNVVRLLSHRPNLRLLSVLAPDGPEERFAFLAQRLRLPDRPQRPILVYVTLQATAEAAAAALVAEGFETRAYHAGMAAADREDVQNWFMQPRADGAQPVVVGTLAFGMGIDKSDIGGVYHLNLPRSLEEYAQGVGRSGRDGRPAVCEALVSPADVPILKALVYGNMPSPAAVAGLLEAV 1116
            S  L +VFG +GFR+GQ  V S LL  +S  A+FPTG GKSLCYQLPA++L     G+TLVVSPL+ALMKDQ++ L +RG+  ARLD TL  E+++       +G L LLY++PER  NERFL+ L +  +A+  VDEAHCISEWGHNFRPDY++L+  AR  G    LALTATATP VA D+A    I P+N+++   HRPNL L  V    G +ER   L  RLR   RP+ P +VYVTLQ TAE  A+ L   GF  RAYHAGM A  R  VQ+WFM      A  VVV T+AFGMGIDK DI  VYH NLP+SLE YAQ +GR+GRDG P+ CE L +  DV +L+   YG+ P+P AVAG+L  V
Sbjct:    5 SHLLGSVFGFSGFREGQEAVVSRLLHSRSVLAIFPTGAGKSLCYQLPALMLD----GVTLVVSPLIALMKDQIDFLTSRGIPAARLDSTLGPEELRQLYSDLRAGTLRLLYIAPERLANERFLQTLRRLRIAMLAVDEAHCISEWGHNFRPDYMKLASLARTLGVGRVLALTATATPSVARDIAAAFDITPENIIQTGFHRPNLSL-HVTPTRGGDERRELLLSRLR--SRPRGPTIVYVTLQRTAEETASFLEEHGFAARAYHAGMDAEVRHQVQDWFM----GSADAVVVATIAFGMGIDKRDIRSVYHFNLPKSLENYAQEIGRAGRDGEPSTCELLAALEDVTVLENFTYGDTPTPQAVAGVLRHV 363          
BLAST of mRNA_P-wetherbeei_contig5483.2.1 vs. uniprot
Match: UPI000AB9CF76 (RecQ family ATP-dependent DNA helicase n=3 Tax=Candidatus Thiosymbion oneisti TaxID=589554 RepID=UPI000AB9CF76)

HSP 1 Score: 358 bits (920), Expect = 1.830e-115
Identity = 205/373 (54.96%), Postives = 250/373 (67.02%), Query Frame = 1
Query:    1 DVSECLRTVFGHTGFRDGQAKVTSLLLARQSCAAVFPTGLGKSLCYQLPAVLLARRGLGMTLVVSPLVALMKDQVEALQARGVACARLDGTLDAEQVQDTLKAAHSGDLALLYVSPERFNNERFLRMLSKSPVAVFVVDEAHCISEWGHNFRPDYLRLSEFARAAGAPLRLALTATATPKVAADMAERLAIPPDNVVRLLSHRPNLRLLSVLAPDGPEERFAFLAQRLRLPDRPQRPILVYVTLQATAEAAAAALVAEGFETRAYHAGMAAADREDVQNWFMQPRADGAQPVVVGTLAFGMGIDKSDIGGVYHLNLPRSLEEYAQGVGRSGRDGRPAVCEALVSPADVPILKALVYGNMPSPAAVAGLLEAVF 1119
            DV   L+  FG   FR GQ  V + L+A  S AAVFPTG GKSLCYQLPA+LL     G+TLVVSPL+ALMKDQ++AL  RG+A ARLD TLDA   +  ++    G L LLYV+PERFNNERF   ++   +++F VDEAHCISEWGHNFRPDYL+L+ FARA GA   LALTATAT +V AD+ + LAI  +  VR   +RPNL L   + P    ER   L   LR    P  P +VYVTLQ TAE  A  LVA G E RAYHAGM    R ++Q+WFM       Q +VV T+AFGMGIDK++I  VYH NLP+SLE Y+Q +GR+GRDG PA+C  LV P D+ +L+  VYG+ P P AV GL+  +F
Sbjct:    4 DVQAALKRHFGFETFRPGQEAVVAHLMAGHSAAAVFPTGGGKSLCYQLPALLLP----GLTLVVSPLIALMKDQIDALTRRGIAAARLDSTLDAAAHRTVMEQVRKGTLRLLYVAPERFNNERFREAITPVRISLFAVDEAHCISEWGHNFRPDYLKLAGFARACGAERVLALTATATERVLADICDGLAIDAERAVRTGFYRPNLSL--TMTPVSAAERDGSLLTALRA--NPPGPTIVYVTLQRTAEELAERLVAAGCEARAYHAGMQDVLRAEIQDWFMA----SDQAIVVATIAFGMGIDKANIRYVYHYNLPKSLENYSQEIGRAGRDGEPAICHLLVCPDDLNVLENFVYGDTPHPHAVRGLIRDIF 364          
BLAST of mRNA_P-wetherbeei_contig5483.2.1 vs. uniprot
Match: UPI001951ACB3 (RecQ family ATP-dependent DNA helicase n=1 Tax=Archangium violaceum TaxID=83451 RepID=UPI001951ACB3)

HSP 1 Score: 352 bits (902), Expect = 6.040e-113
Identity = 200/370 (54.05%), Postives = 244/370 (65.95%), Query Frame = 1
Query:    7 SECLRTVFGHTGFRDGQAKVTSLLLARQSCAAVFPTGLGKSLCYQLPAVLLARRGLGMTLVVSPLVALMKDQVEALQARGVACARLDGTLDAEQVQDTLKAAHSGDLALLYVSPERFNNERFLRMLSKSPVAVFVVDEAHCISEWGHNFRPDYLRLSEFARAAGAPLRLALTATATPKVAADMAERLAIPPDNVVRLLSHRPNLRLLSVLAPDGPEERFAFLAQRLRLPDRPQRPILVYVTLQATAEAAAAALVAEGFETRAYHAGMAAADREDVQNWFMQPRADGAQPVVVGTLAFGMGIDKSDIGGVYHLNLPRSLEEYAQGVGRSGRDGRPAVCEALVSPADVPILKALVYGNMPSPAAVAGLLEAV 1116
            S+ L +VFG   FR+GQ  V S LL  +S  AVFPTG GKSLCYQLPA++L     G+TLV+SPL+ALMKDQ++ L  RG+  ARLD TL  E+++       +G L LLYV+PER  NERFL+ L +  +A+  VDEAHCISEWGHNFRPDY++L+  AR       LALTATATP VA D+A    I   +V++   HRPNL L  V    G +ER   L  RLR   RP+ P +VYVTLQ TAE  A  L   GF  RAYHAGM    R  VQ+WFM      A  VVV T+AFGMGIDKSDI  VYH NLP+SLE YAQ +GR+GRDG+P+ CE L +  DV +L+   YG+ P+P AVAG+L  V
Sbjct:    5 SQVLHSVFGFPDFREGQEAVVSRLLESRSVLAVFPTGAGKSLCYQLPALMLE----GVTLVISPLIALMKDQIDFLTRRGIPAARLDSTLGPEEIRQLYSDLRAGTLKLLYVAPERLANERFLQTLRRLRIAMLAVDEAHCISEWGHNFRPDYMKLASLARTLKVERVLALTATATPSVARDIAAAFDIAAGDVIQTGFHRPNLSL-HVTPTQGGDERRELLLSRLR--SRPRGPTIVYVTLQRTAEETADFLSGNGFAARAYHAGMEPEVRHQVQDWFM----GSADAVVVATIAFGMGIDKSDIRSVYHCNLPKSLENYAQEIGRAGRDGKPSTCELLAAMEDVTVLENFTYGDTPTPEAVAGVLRHV 363          
BLAST of mRNA_P-wetherbeei_contig5483.2.1 vs. uniprot
Match: A0A369BQI3_9GAMM (RecQ-like ATP-dependent DNA helicase n=1 Tax=Thioalbus denitrificans TaxID=547122 RepID=A0A369BQI3_9GAMM)

HSP 1 Score: 351 bits (901), Expect = 8.300e-113
Identity = 202/364 (55.49%), Postives = 245/364 (67.31%), Query Frame = 1
Query:   28 FGHTGFRDGQAKVTSLLLARQSCAAVFPTGLGKSLCYQLPAVLLARRGLGMTLVVSPLVALMKDQVEALQARGVACARLDGTLDAEQVQDTLKAAHSGDLALLYVSPERFNNERFLRMLSKSPVAVFVVDEAHCISEWGHNFRPDYLRLSEFARAAGAPLRLALTATATPKVAADMAERLAIPPDNVVRLLSHRPNLRLLSVLAPDGPEERFAFLAQRLRLPDRPQRPILVYVTLQATAEAAAAALVAEGFETRAYHAGMAAADREDVQNWFMQPRADGAQPVVVGTLAFGMGIDKSDIGGVYHLNLPRSLEEYAQGVGRSGRDGRPAVCEALVSPADVPILKALVYGNMPSPAAVAGLLEAVF 1119
            FGH   R GQA V   LLA +S AAVFPTG GKSLCYQLPA+LL     G+TLVVSPL+ALMKDQ++AL ARG+A  RLD TL AE  ++ ++    G L LLYV+PERFNNERF   +++  V++F VDEAHCISEWGHNFRPDYL+L+EFAR  GA   LALTATATP+V  D+     I P   VR   +RPNL LL+   P   + R   L   LR  +RP+ P +VYVTLQ TAE  A  L   G   RAYHAG+   +R  VQ WFM    DG   +VV T+AFGMG+DK+DI  VYH N P+SLE YAQ +GR+GRDG PA+C  L+   D+ +L+  VYG+ P   AV GLL A+F
Sbjct:   13 FGHAELRPGQAPVMEHLLAGRSAAAVFPTGGGKSLCYQLPALLLP----GLTLVVSPLIALMKDQIDALAARGIAARRLDSTLGAEGHREVMERVRDGSLRLLYVAPERFNNERFRAAIARVRVSLFAVDEAHCISEWGHNFRPDYLKLAEFAREFGAERILALTATATPRVLEDICAAFRIAPGCAVRTGFYRPNLHLLTT--PVAADRRDGKLLGLLR--ERPRGPTIVYVTLQRTAETLAGRLAGAGLPARAYHAGLKEEERTRVQEWFMAS-GDG---IVVATIAFGMGVDKADIRYVYHYNPPKSLENYAQEIGRAGRDGEPAICHLLLCADDLNVLENFVYGDTPDVGAVRGLLGALF 364          
BLAST of mRNA_P-wetherbeei_contig5483.2.1 vs. uniprot
Match: S9QJM9_9DELT (ATP-dependent DNA helicase, RecQ family n=3 Tax=Cystobacter TaxID=42 RepID=S9QJM9_9DELT)

HSP 1 Score: 347 bits (890), Expect = 3.890e-111
Identity = 195/367 (53.13%), Postives = 244/367 (66.49%), Query Frame = 1
Query:   16 LRTVFGHTGFRDGQAKVTSLLLARQSCAAVFPTGLGKSLCYQLPAVLLARRGLGMTLVVSPLVALMKDQVEALQARGVACARLDGTLDAEQVQDTLKAAHSGDLALLYVSPERFNNERFLRMLSKSPVAVFVVDEAHCISEWGHNFRPDYLRLSEFARAAGAPLRLALTATATPKVAADMAERLAIPPDNVVRLLSHRPNLRLLSVLAPDGPEERFAFLAQRLRLPDRPQRPILVYVTLQATAEAAAAALVAEGFETRAYHAGMAAADREDVQNWFMQPRADGAQPVVVGTLAFGMGIDKSDIGGVYHLNLPRSLEEYAQGVGRSGRDGRPAVCEALVSPADVPILKALVYGNMPSPAAVAGLLEAV 1116
            L++VFG +GFR+GQ  V S LL  +S  A+FPTG GKSLCYQLPA++L     G+TLV+SPL+ALMKDQ++ LQ RG+  ARLD TL  E+++       +G L LLY++PER  NERFL+ L    +++  VDEAHC+SEWGHNFRPDY++L+  AR       LALTATATP VA D+A    I P +VV+   HRPNL L     P G   R   L+   RL  RP+   +VYVTLQ TAE  A  L   G   RAYHAG+A   R +VQ+WFM      A  VVV T+AFGMGIDKSDI  VYH NLP+SLE YAQ +GR+GRDG+P+ CE L +  DV +L+   YG+ P+P AV G+LE V
Sbjct:    8 LQSVFGFSGFREGQEPVVSRLLEARSVLAIFPTGAGKSLCYQLPALMLE----GLTLVISPLIALMKDQIDFLQGRGIPAARLDSTLGPEELRQLYADLKAGTLKLLYIAPERLANERFLQTLRGVRISMLAVDEAHCMSEWGHNFRPDYMKLAPLARTLKVERVLALTATATPSVARDIAGAFGIAPGDVVQTGFHRPNLTLHVSPTPGGDARRELLLS---RLRSRPRGATIVYVTLQRTAEETARFLTDHGLSARAYHAGLAPEVRHEVQDWFM----GSADAVVVATIAFGMGIDKSDIRAVYHCNLPKSLENYAQEIGRAGRDGQPSDCELLAAREDVVVLENFTYGDTPTPEAVTGVLEHV 363          
BLAST of mRNA_P-wetherbeei_contig5483.2.1 vs. uniprot
Match: A0A2M7Q472_9PROT (RecQ family ATP-dependent DNA helicase n=1 Tax=Zetaproteobacteria bacterium CG_4_10_14_0_8_um_filter_49_80 TaxID=1974111 RepID=A0A2M7Q472_9PROT)

HSP 1 Score: 346 bits (887), Expect = 1.090e-110
Identity = 197/373 (52.82%), Postives = 249/373 (66.76%), Query Frame = 1
Query:    1 DVSECLRTVFGHTGFRDGQAKVTSLLLARQSCAAVFPTGLGKSLCYQLPAVLLARRGLGMTLVVSPLVALMKDQVEALQARGVACARLDGTLDAEQVQDTLKAAHSGDLALLYVSPERFNNERFLRMLSKSPVAVFVVDEAHCISEWGHNFRPDYLRLSEFARAAGAPLRLALTATATPKVAADMAERLAIPPDNVVRLLSHRPNLRLLSVLAPDGPEERFAFLAQRLRLPDRPQRPILVYVTLQATAEAAAAALVAEGFETRAYHAGMAAADREDVQNWFMQPRADGAQPVVVGTLAFGMGIDKSDIGGVYHLNLPRSLEEYAQGVGRSGRDGRPAVCEALVSPADVPILKALVYGNMPSPAAVAGLLEAVF 1119
            ++ E L+  FG   F  GQ  V   LLA  S  A+FPTG GKSLCYQLPA+LL     G+TLVVSPL+ALMKDQ++ALQ RG+A ARLD +L A++ ++    A SG L +LYV+PERFNNERF   ++  P+A+  +DEAHCISEWGHNFRPDYL+L E+A++  A   LALTATAT  V  D+    +I  D  +R   +RPNL LLS     G  ER A L  R+R   R   P++VYVTLQ TAE  AA L   GF  R YHAGM    R + Q WFMQ  AD A  +VV T+AFGMG+DKS+I  VYH NL +SLE YAQ +GR+GRDG P++CE LV   D+ +L+  +YG+ P+ AA+  LL+ +F
Sbjct:    5 NIDETLQRYFGFRAFNPGQRAVIEQLLAGHSALAIFPTGGGKSLCYQLPALLLP----GLTLVVSPLIALMKDQIDALQQRGIAAARLDSSLSADEYREVFNQARSGALKMLYVAPERFNNERFRATIAGLPIALLAIDEAHCISEWGHNFRPDYLKLPEYAQSFAAERVLALTATATRAVEDDICRAFSIQSDCAIRTGFYRPNLTLLSSAVSAG--ERDATLLARIR--SRASGPVIVYVTLQRTAEEVAARLAEAGFSARPYHAGMKNELRAETQEWFMQ--ADDA--IVVATIAFGMGVDKSNIRYVYHYNLAKSLENYAQEIGRAGRDGEPSICEMLVCMDDLNVLENFIYGDTPTQAALQSLLDDLF 365          
BLAST of mRNA_P-wetherbeei_contig5483.2.1 vs. uniprot
Match: A0A4V1UMY5_9BACT (ATP-dependent DNA helicase RecQ (Fragment) n=1 Tax=bacterium TaxID=1869227 RepID=A0A4V1UMY5_9BACT)

HSP 1 Score: 335 bits (860), Expect = 3.790e-110
Identity = 190/366 (51.91%), Postives = 241/366 (65.85%), Query Frame = 1
Query:   16 LRTVFGHTGFRDGQAKVTSLLLARQSCAAVFPTGLGKSLCYQLPAVLLARRGLGMTLVVSPLVALMKDQVEALQARGVACARLDGTLDAEQVQDTLKAAHSGDLALLYVSPERFNNERFLRMLSKSPVAVFVVDEAHCISEWGHNFRPDYLRLSEFARAAGAPLRLALTATATPKVAADMAERLAIPPDNVVRLLSHRPNLRLLSVLAPDGPEERFAFLAQRLRLPDRPQRPILVYVTLQATAEAAAAALVAEGFETRAYHAGMAAADREDVQNWFM-QPRADGAQPVVVGTLAFGMGIDKSDIGGVYHLNLPRSLEEYAQGVGRSGRDGRPAVCEALVSPADVPILKALVYGNMPSPAAVAGLLE 1110
            L+  FG  GFR GQA+    +L   +  AVFPTG GKSLCYQLP++++     G+T+VVSPL+ALMKDQ++ L  RGV  ARLD T+ A++ +       SG+L LLYV+PERFNNERFL  L ++ + +F VDEAHCISEWGHNFRPDYL+L+E ARA GA   LALTATATP V  D+     IP   V     +RPNL L  ++ P  P+ER A L +R+R   RP    +VYVTLQ TAE  AA L AEG   RAYHAGM   +R   Q+W+M  P A     VVV T+AFGMGIDK+D+  VYH NLP+SLE Y+Q +GR+GRDG+ +  E L    D+P L    YG+ P P+++  L+ 
Sbjct:    8 LKERFGFDGFRPGQAQAIEAVLRDGAALAVFPTGGGKSLCYQLPSLVVE----GITVVVSPLLALMKDQIDFLTRRGVPAARLDSTMSADEARSVSARVRSGELKLLYVAPERFNNERFLAELGRTEIGLFAVDEAHCISEWGHNFRPDYLKLAETARALGAKRVLALTATATPTVVRDVCTAFGIPDTGVALTGFYRPNLNL--IVTPCTPQERLAKLVERIR--KRPPGTTIVYVTLQKTAEQVAARLAAEGLNARAYHAGMEPEERTATQDWWMADPTA-----VVVATIAFGMGIDKADVRYVYHYNLPKSLESYSQEMGRAGRDGQASTVETLACACDLPTLANFAYGDTPEPSSLRALVS 360          
BLAST of mRNA_P-wetherbeei_contig5483.2.1 vs. uniprot
Match: N6YUJ8_9RHOO (ATP-dependent DNA helicase RecQ n=1 Tax=Thauera phenylacetica B4P TaxID=1234382 RepID=N6YUJ8_9RHOO)

HSP 1 Score: 344 bits (882), Expect = 7.000e-110
Identity = 198/370 (53.51%), Postives = 250/370 (67.57%), Query Frame = 1
Query:   16 LRTVFGHTGFRDGQAKVTSLLLARQSCAAVFPTGLGKSLCYQLPAVLLARRGLGMTLVVSPLVALMKDQVEALQARGVACARLDGTLDAEQVQDTLKAAHSGDLALLYVSPERFNNERFLRMLSKSPVAVFVVDEAHCISEWGHNFRPDYLRLSEFARAAGAPLRLALTATATPKVAADMAERLAIPPDNVVRLLSHRPNLRLL--SVLAPDGPEERFAFLAQRLRLPDRPQRPILVYVTLQATAEAAAAALVAEGFETRAYHAGMAAADREDVQNWFMQPRADGAQPVVVGTLAFGMGIDKSDIGGVYHLNLPRSLEEYAQGVGRSGRDGRPAVCEALVSPADVPILKALVYGNMPSPAAVAGLLEAVF 1119
            L+  FGH+ FR GQ  V   L+A +S AAVFPTG GKSLCYQLPA+LL     G+T+VVSPL+ALMKDQ++AL ARG+A  RLD TL  ++ +  + A   G L LLYV+PERFNNERF   +++  +++F VDEAHCISEWGHNFRPDYL+L+ FARA GA   LALTATATP V  D+    A+ P+  VR   +RPNL+LL  +V A    E     LAQR         P +VYV+LQ TAEA AA L A  +  RAYHAGM   +R  VQ WFM   +D A  +VV T+AFGMG+DK+DI  VYH NLP+SLE YAQ +GR+GRDG P+ C  L+   D+ +L+  +YG+ P  AA+  LL+ +F
Sbjct:   11 LQKHFGHSRFRPGQEAVIEHLMAGRSAAAVFPTGGGKSLCYQLPALLLP----GVTVVVSPLIALMKDQIDALAARGIAAGRLDSTLGTDEYRALMAALRDGSLRLLYVAPERFNNERFRAAIARVRISLFAVDEAHCISEWGHNFRPDYLKLAGFARAVGAERILALTATATPPVLDDICRIFAVQPECAVRTGFYRPNLQLLVSAVEARARDETLLGLLAQRA------PGPTIVYVSLQKTAEALAATLAAAAWPARAYHAGMKDDERAAVQEWFMA--SDRA--IVVATIAFGMGVDKADIRYVYHYNLPKSLENYAQEIGRAGRDGGPSTCHLLLVTRDINVLENFIYGDTPDKAALGSLLDELF 366          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5483.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZN1_ECTSI3.580e-13256.13DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A835Z8G9_9STRA7.830e-13055.29DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
UPI00193AF2E44.690e-11654.59RecQ family ATP-dependent DNA helicase n=1 Tax=Arc... [more]
UPI000AB9CF761.830e-11554.96RecQ family ATP-dependent DNA helicase n=3 Tax=Can... [more]
UPI001951ACB36.040e-11354.05RecQ family ATP-dependent DNA helicase n=1 Tax=Arc... [more]
A0A369BQI3_9GAMM8.300e-11355.49RecQ-like ATP-dependent DNA helicase n=1 Tax=Thioa... [more]
S9QJM9_9DELT3.890e-11153.13ATP-dependent DNA helicase, RecQ family n=3 Tax=Cy... [more]
A0A2M7Q472_9PROT1.090e-11052.82RecQ family ATP-dependent DNA helicase n=1 Tax=Zet... [more]
A0A4V1UMY5_9BACT3.790e-11051.91ATP-dependent DNA helicase RecQ (Fragment) n=1 Tax... [more]
N6YUJ8_9RHOO7.000e-11053.51ATP-dependent DNA helicase RecQ n=1 Tax=Thauera ph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5483contigP-wetherbeei_contig5483:1490..3759 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FZN1
PFAMsDEAD,Helicase_C,RecQ_Zn_bind
Model size1119
Max annot lvl2759|Eukaryota
KEGG koko:K03654
KEGG Pathwayko03018,map03018
Hectar predicted targeting categoryother localisation
Exons6
Evalue5.87e-133
EggNOG OGsCOG0514@1|root,KOG0351@2759|Eukaryota
Ec32 ortholog descriptionDEAD box helicase
Ec32 orthologEc-19_003700.1
EC3.6.4.12
Descriptionfour-way junction helicase activity
Cds size1119
COG categoryL
BRITEko00000,ko00001,ko01000,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5483.2.1prot_P-wetherbeei_contig5483.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5483 1490..3759 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186818.3420918-CDS-P-wetherbeei_contig5483:1489..17051683186818.3420918-CDS-P-wetherbeei_contig5483:1489..1705Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5483 1490..1705 +
1683186818.36095-CDS-P-wetherbeei_contig5483:1921..20821683186818.36095-CDS-P-wetherbeei_contig5483:1921..2082Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5483 1922..2082 +
1683186818.3721118-CDS-P-wetherbeei_contig5483:2370..24531683186818.3721118-CDS-P-wetherbeei_contig5483:2370..2453Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5483 2371..2453 +
1683186818.381785-CDS-P-wetherbeei_contig5483:2623..27121683186818.381785-CDS-P-wetherbeei_contig5483:2623..2712Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5483 2624..2712 +
1683186818.4010422-CDS-P-wetherbeei_contig5483:2933..33101683186818.4010422-CDS-P-wetherbeei_contig5483:2933..3310Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5483 2934..3310 +
1683186818.4110014-CDS-P-wetherbeei_contig5483:3566..37591683186818.4110014-CDS-P-wetherbeei_contig5483:3566..3759Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5483 3567..3759 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5483.2.1

>prot_P-wetherbeei_contig5483.2.1 ID=prot_P-wetherbeei_contig5483.2.1|Name=mRNA_P-wetherbeei_contig5483.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=373bp
DVSECLRTVFGHTGFRDGQAKVTSLLLARQSCAAVFPTGLGKSLCYQLPA
VLLARRGLGMTLVVSPLVALMKDQVEALQARGVACARLDGTLDAEQVQDT
LKAAHSGDLALLYVSPERFNNERFLRMLSKSPVAVFVVDEAHCISEWGHN
FRPDYLRLSEFARAAGAPLRLALTATATPKVAADMAERLAIPPDNVVRLL
SHRPNLRLLSVLAPDGPEERFAFLAQRLRLPDRPQRPILVYVTLQATAEA
AAAALVAEGFETRAYHAGMAAADREDVQNWFMQPRADGAQPVVVGTLAFG
MGIDKSDIGGVYHLNLPRSLEEYAQGVGRSGRDGRPAVCEALVSPADVPI
LKALVYGNMPSPAAVAGLLEAVF
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mRNA from alignment at P-wetherbeei_contig5483:1490..3759+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5483.2.1 ID=mRNA_P-wetherbeei_contig5483.2.1|Name=mRNA_P-wetherbeei_contig5483.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2270bp|location=Sequence derived from alignment at P-wetherbeei_contig5483:1490..3759+ (Phaeothamnion wetherbeei SAG_119_79)
GATGTCAGCGAGTGCTTGCGCACTGTGTTTGGTCACACGGGCTTTCGAGA TGGGCAAGCCAAGGTGACTTCTCTTCTTCTTGCGAGGCAGTCGTGCGCAG CCGTCTTCCCAACTGGCCTGGGTAAGAGTCTTTGCTACCAACTGCCGGCC GTTCTTCTCGCAAGGAGAGGCCTAGGCATGACCCTCGTTGTGTCGCCGCT CGTCGCATTAATGAAGGTGAGAATGAAGGTGGTTCTTTTTGAGAGCCTTT TGAAGATTCAACACAGTCGTTCGAACAGCAAGCCGTGGCATTTCATGTCT GTGATAAAAAGTTTAAGTGTTTTTTTTTAAGATTATCCTTCTCTCACAGG CGCTGGACTGTGCTATTTTTAGTGCCTGGCCGCCTCCGGCTGCTTAAAAC TCCTCCAAATCATCGATATTCATTGCCATCAGGATCAAGTTGAGGCATTG CAAGCCCGCGGCGTGGCGTGCGCGCGATTGGATGGCACTCTCGATGCCGA GCAAGTGCAAGACACATTGAAGGCGGCGCACTCCGGTGACCTCGCACTTC TTTATGTGTCGCCGGAGCGCTTCAACAACGAGCGCTTCCTTAGGTGTGCC TTGCGGAAGCAGTTTTTCCTGGGGCCTGGAAGAGCTGACACATCCTTAAA CCAGCATATTTTATATCGTCCAGCATCCTCTTCTTATTTGATGAAGGGAT TGGTTAGGAAGAAAACGGAAGGGTTGGGCGAGTCGGCTGATGCAGGAAGA GTTTAAACAAGGCTGCAGCTTCGGCCATGACTGTCCCTTGACCTCAGAGT GCTCATCTCGCCGCTTGCGTTAGGCTCACCTGCCGCCAAATCCGGCACCT TTAGCTTGCTCATTGCATGATTCGGTCGCAGGATGCTGTCCAAATCTCCT GTGGCCGTGTTTGTCGTGGATGAGGCCCATTGTATCAGCGAATGGGGCCA CAACTTTCGCCCAGGTGAAGTCTGGGTGACCAGGTGGCTCTTTGTCTACC AGAGATTGGGCACAACGGGAGAGGATAACATTTCCATGACCCTAGGAAGG AAGACGCCTAGCGCCGAGCAAGGAATGAATGATGAAAGTTAACCTTCTGG TGCCTTTCCGATCTTTCTTCCTGTCCGTCGGCAGACTATCTGCGGCTCTC AGAGTTCGCACGAGCGGCCGGTGCCCCACTACGGCTGGCGCTGACGGCGA CGGCGACGCCAAAAGTCGCTGCGGTAAGGGAAAGTAGCGCTCTGGCAAGA CCCCTGGGAAGCTACTACCTCCCGGCTGCCAAGATGAAGCATCAGCTATG ACAAAACCGCACACACCAAATACTTCCTTCGCTTTTATCTGGCGCTGAAG TACTTGGTTGAACGTCGCAGAAAGTGGTCAAGAGTTTTTTGGCCTGTCAT TAACATTATAACGTTCTGTCGCACCCGCCATCGCGTCTTTGCAGGACATG GCGGAGCGCCTAGCCATCCCACCGGACAATGTAGTGCGCCTGTTGTCGCA CCGCCCCAACCTCCGCCTGTTGTCGGTGCTCGCCCCGGACGGCCCCGAGG AGCGCTTTGCATTTTTGGCGCAGCGGCTACGCCTGCCGGATCGGCCGCAA CGGCCGATACTGGTCTACGTGACCCTGCAGGCAACGGCGGAGGCGGCCGC GGCGGCGCTGGTGGCGGAGGGGTTCGAGACACGGGCGTACCATGCGGGGA TGGCCGCGGCGGACCGCGAGGATGTGCAGAACTGGTTCATGCAGCCGCGG GCGGACGGCGCGCAGCCGGTGGTGGTCGGGACGCTGGCGTTCGGCATGGG CATCGACAAGAGCGACATCGGGTGCGTTTAGGAGAAGCTGATGGCGTGCT GTGTTTGCTGTTTTTGTTCACCTACTTTATGTCGGCCGGCTTTCGTATCT GTGCCTGCATTACCATGGCATCCCAACATGTTGCATAAGGGGGAAAGACA GCATATGACAGATCGTCTTGTTGCGATGCCGCCGCTGCTGCCGTCGTGAC CATTGCTGCCGCCACCGCCATCGTCTCTTGCTTCTGTCTTCGCCTCTTGC CCGCCGCCCCGCGACGAACGCACGCAGCGGCGTCTATCACCTTAACCTTC CCAGGAGCCTCGAGGAATACGCGCAGGGCGTCGGCCGCAGCGGCCGCGAC GGGCGGCCCGCCGTCTGCGAGGCGCTCGTTTCCCCCGCAGACGTGCCGAT CCTGAAAGCCCTTGTCTACGGCAACATGCCATCGCCCGCCGCCGTCGCCG GCCTCCTGGAGGCGGTGTTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5483:1490..3759+

>mRNA_P-wetherbeei_contig5483.2.1 ID=mRNA_P-wetherbeei_contig5483.2.1|Name=mRNA_P-wetherbeei_contig5483.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1119bp|location=Sequence derived from alignment at P-wetherbeei_contig5483:1490..3759+ (Phaeothamnion wetherbeei SAG_119_79)
GATGTCAGCGAGTGCTTGCGCACTGTGTTTGGTCACACGGGCTTTCGAGA
TGGGCAAGCCAAGGTGACTTCTCTTCTTCTTGCGAGGCAGTCGTGCGCAG
CCGTCTTCCCAACTGGCCTGGGTAAGAGTCTTTGCTACCAACTGCCGGCC
GTTCTTCTCGCAAGGAGAGGCCTAGGCATGACCCTCGTTGTGTCGCCGCT
CGTCGCATTAATGAAGGATCAAGTTGAGGCATTGCAAGCCCGCGGCGTGG
CGTGCGCGCGATTGGATGGCACTCTCGATGCCGAGCAAGTGCAAGACACA
TTGAAGGCGGCGCACTCCGGTGACCTCGCACTTCTTTATGTGTCGCCGGA
GCGCTTCAACAACGAGCGCTTCCTTAGGATGCTGTCCAAATCTCCTGTGG
CCGTGTTTGTCGTGGATGAGGCCCATTGTATCAGCGAATGGGGCCACAAC
TTTCGCCCAGACTATCTGCGGCTCTCAGAGTTCGCACGAGCGGCCGGTGC
CCCACTACGGCTGGCGCTGACGGCGACGGCGACGCCAAAAGTCGCTGCGG
ACATGGCGGAGCGCCTAGCCATCCCACCGGACAATGTAGTGCGCCTGTTG
TCGCACCGCCCCAACCTCCGCCTGTTGTCGGTGCTCGCCCCGGACGGCCC
CGAGGAGCGCTTTGCATTTTTGGCGCAGCGGCTACGCCTGCCGGATCGGC
CGCAACGGCCGATACTGGTCTACGTGACCCTGCAGGCAACGGCGGAGGCG
GCCGCGGCGGCGCTGGTGGCGGAGGGGTTCGAGACACGGGCGTACCATGC
GGGGATGGCCGCGGCGGACCGCGAGGATGTGCAGAACTGGTTCATGCAGC
CGCGGGCGGACGGCGCGCAGCCGGTGGTGGTCGGGACGCTGGCGTTCGGC
ATGGGCATCGACAAGAGCGACATCGGCGGCGTCTATCACCTTAACCTTCC
CAGGAGCCTCGAGGAATACGCGCAGGGCGTCGGCCGCAGCGGCCGCGACG
GGCGGCCCGCCGTCTGCGAGGCGCTCGTTTCCCCCGCAGACGTGCCGATC
CTGAAAGCCCTTGTCTACGGCAACATGCCATCGCCCGCCGCCGTCGCCGG
CCTCCTGGAGGCGGTGTTT
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