mRNA_P-wetherbeei_contig54814.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54814.1.1 vs. uniprot
Match: UPI0004A7305E (EAL domain-containing protein n=1 Tax=Nevskia soli TaxID=418856 RepID=UPI0004A7305E) HSP 1 Score: 152 bits (384), Expect = 7.220e-40 Identity = 88/166 (53.01%), Postives = 111/166 (66.87%), Query Frame = 1
Query: 16 PERPLLLLDPPLSLDTLLAARAAGADDCVGCDSPAQLRHLEQVVLRELASQDCRRQLRQARSRLADFEARHEKLTDSTGDAVACIQEGIVVRANAALAERLGVDDPAALTGQPLIDLVAASQQADIKARLRAVLKGAASSEPLQLQLAGRHGVVTVEAQMILGQQD 513
P+ P++++ S++ +AA AAGA D V QLRHLE VV+RE R LR + RLADFE+RH++LT+ T DAVA +QEGI+ AN A +G D+PA L GQPLIDLVA QQ+ IK RLRAV KG + EPL+L L GR G V V+AQ+ILG QD
Sbjct: 86 PDLPVVVISNDHSVEDAVAALAAGAQDFVSYSDLRQLRHLELVVVREFVKHHHMRNLRLTQQRLADFESRHQQLTEGTADAVAHVQEGILANANLAFTHLIGYDEPAELAGQPLIDLVAPDQQSKIKERLRAVQKGKHNGEPLELVLVGRKGQVHVKAQLILGTQD 251
BLAST of mRNA_P-wetherbeei_contig54814.1.1 vs. uniprot
Match: A0A3N0VDJ8_9GAMM (EAL domain-containing protein n=1 Tax=Stagnimonas aquatica TaxID=2689987 RepID=A0A3N0VDJ8_9GAMM) HSP 1 Score: 121 bits (303), Expect = 9.820e-29 Identity = 72/166 (43.37%), Postives = 99/166 (59.64%), Query Frame = 1
Query: 16 PERPLLLLDPPLSLDTLLAARAAGADDCVGCDSPAQLRHLEQVVLRELASQDCRRQLRQARSRLADFEARHEKLTDSTGDAVACIQEGIVVRANAALAERLGVDDPAALTGQPLIDLVAASQQADIKARLRAVLKGAASSEPLQLQLAGRHGVVTVEAQMILGQQD 513
P+ P+L+L ++ A GA D +G AQLR LE VV+RE R+LR RL DFE RH +L ++T DAVA +QEGI+ AN + A+ LG ++P AL G+PLID V A Q+ +K RLR VLKG + EPL+ G+ V V AQ+++ +D
Sbjct: 94 PDLPVLILSREPRPGGVVQALEHGARDLLGYGDAAQLRQLELVVIREFLGHQHLRRLRVMSERLHDFEQRHSQLLETTADAVAHVQEGILAHANPSFAKLLGYENPEALQGEPLIDFVVADQRTRVKERLRLVLKGKHAGEPLEFSFEGKEHPVPVSAQLVVSSED 259
BLAST of mRNA_P-wetherbeei_contig54814.1.1 vs. uniprot
Match: A0A318EJC1_9GAMM (PAS domain S-box-containing protein n=1 Tax=Sinimarinibacterium flocculans TaxID=985250 RepID=A0A318EJC1_9GAMM) HSP 1 Score: 119 bits (299), Expect = 3.340e-28 Identity = 74/171 (43.27%), Postives = 102/171 (59.65%), Query Frame = 1
Query: 4 RRLLPERPLLLLDPPLSLDTLLAARAAGADDCVGCDSPAQLRHLEQVVLRELASQDCRRQLRQARSRLADFEARHEKLTDSTGDAVACIQEGIVVRANAALAERLGVDDPAALTGQPLIDLVAASQQADIKARLRAVLKGAASSEPLQLQLAGRHGV-VTVEAQMILGQQD 513
RRL+P+ P+L+L P ++ + +AA AAGA D V + +RHLE VVLRE+A R+LR R RL DFE+RH++L T DA+A IQEGI+ N A A+ LG + LT PL+DLVA Q +K L+ L+G PL+ L + G V++ A + LG D
Sbjct: 90 RRLMPDLPVLVLSPQITAEDSVAALAAGASDVVSNEDLRHMRHLELVVLREIAKHSQLRELRSTRQRLEDFESRHQQLIAGTNDAIAHIQEGILSEVNPAFAQLLGYERADDLTALPLMDLVADDHQPKVKEHLKLFLRGKNEGRPLECCLLHKDGRRVSIGAHLTLGSAD 260
BLAST of mRNA_P-wetherbeei_contig54814.1.1 vs. uniprot
Match: A0A521N5C8_9GAMM (EAL domain-containing protein n=1 Tax=Sinobacteraceae bacterium TaxID=1969813 RepID=A0A521N5C8_9GAMM) HSP 1 Score: 115 bits (289), Expect = 7.630e-27 Identity = 70/166 (42.17%), Postives = 98/166 (59.04%), Query Frame = 1
Query: 16 PERPLLLLDPPLSLDTLLAARAAGADDCVGCDSPAQLRHLEQVVLRELASQDCRRQLRQARSRLADFEARHEKLTDSTGDAVACIQEGIVVRANAALAERLGVDDPAALTGQPLIDLVAASQQADIKARLRAVLKGAASSEPLQLQLAGRHGVVTVEAQMILGQQD 513
P+ P+L++ S L++A GA D + LR LE VV+RE + R+LR RL DFE RH +L ++T DAVA +QEGI+ AN + A+ LG D+P L G+PLID V A Q+ +K RLR VLKG + E L+ L G+ V V AQ+++ +D
Sbjct: 94 PDLPVLIITRSPSPPGLVSALERGAKDLLSYADVGSLRQLELVVIREFLNHQHLRRLRVMSDRLHDFEQRHSQLLETTADAVAHVQEGILSHANPSFAKLLGYDNPETLHGEPLIDFVVADQRTRVKERLRLVLKGKHAGEALEFSLEGKEHPVPVSAQLVVSNED 259
BLAST of mRNA_P-wetherbeei_contig54814.1.1 vs. uniprot
Match: UPI001CA72F13 (EAL domain-containing protein n=1 Tax=Algiphilus sp. NNCM1 TaxID=2834409 RepID=UPI001CA72F13) HSP 1 Score: 78.2 bits (191), Expect = 1.060e-13 Identity = 56/168 (33.33%), Postives = 83/168 (49.40%), Query Frame = 1
Query: 4 RRLLPERPLLLLD----PPLSLDTLLAARAAGADDCVGCDSPAQLRHLEQVVLRELASQDCRRQLRQARSRLADFEARHEKLTDSTGDAVACIQEGIVVRANAALAERLGVDDPAALTGQPLIDLVAASQQADIKARLRAVLKGAASSEPLQLQLAGRHGVVTVEAQM 495
R+L PE P+L L+ P + L GA D V DS A HL RE + LR+AR RLA++EAR L T A+ + EGIV+ AN A AE LG DD L QPL+DL++A ++ ++ + + +G + ++G + V ++
Sbjct: 74 RQLSPELPVLALEVEGSPASRAEQLKHIFEQGAVDLVRLDSAADKAHLAAACRREFDASRTGWALREARMRLAEYEARQRTLVAETSRAMLTLSEGIVIEANPAAAELLGFDDNEGLIAQPLLDLISADDRSHVRELVAQLTRGRIAEADFTAGFVTQNGDIAVHTRL 241
BLAST of mRNA_P-wetherbeei_contig54814.1.1 vs. uniprot
Match: W0E0D5_MARPU (Diguanylate phosphodiesterase n=5 Tax=Marichromatium TaxID=85076 RepID=W0E0D5_MARPU) HSP 1 Score: 67.4 bits (163), Expect = 5.820e-10 Identity = 53/138 (38.41%), Postives = 72/138 (52.17%), Query Frame = 1
Query: 4 RRLLPERPLLLLDPPLS-LDTLLAARAAGADDCVGCDSPAQLRHLEQVVLRELASQDCRRQLRQARSRLADFEARHEKLTDSTGDAVACIQEGIVVRANAALAERLGVDDPAALTGQPLIDLVAASQQADIKARLRAV 414
RRL + PL+++ P S L AR GA D V D P HL+ V RELA RR+ R +RL E R + + + DA+A +QEG+ + ANAA G D AL G +DL+ A Q+ ++ LRAV
Sbjct: 76 RRLDSDTPLIVITGPESDAAESLRARRGGARDLVRRDDP---EHLQLVAKRELADLYQRREARALATRLRQCERRAREFIEGSLDAIAFVQEGLHLHANAAYLSLFGYADADALAGATFLDLIPAEQRPRVREFLRAV 210
BLAST of mRNA_P-wetherbeei_contig54814.1.1 vs. uniprot
Match: A0A0S7Z301_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium SG8_30 TaxID=1703404 RepID=A0A0S7Z301_9GAMM) HSP 1 Score: 65.9 bits (159), Expect = 1.970e-9 Identity = 49/151 (32.45%), Postives = 75/151 (49.67%), Query Frame = 1
Query: 7 RLLPERPLLLLDPPLSLDTLLAARAAGADDCVGCDSPAQLRHLEQVVLRELASQDCRRQLRQARSRLADFEARHEKLTDSTGDAVACIQEGIVVRANAALAERLGVDDPAALTGQPLIDLVAASQQADIKARLRAVLKGAASSEPLQLQLA 459
RL P+ P+L++ + + AA GA D V S L + +VV REL + R L S + +++ + + + DA+A +QEGI+V AN A E G + P + G PL+D A A +K L A L+G S L++ A
Sbjct: 68 RLAPDVPVLIVRESIDERAIAAALGLGAQDAV---SLRDLDRVARVVARELTAHRLERALSGTVSSMREYKRQLHEFMQGSTDAIAQVQEGIIVEANPAWLELFGHESPETIVGTPLMDSFDAESHAALKGALVACLRGKWSDHALRVSAA 215
BLAST of mRNA_P-wetherbeei_contig54814.1.1 vs. uniprot
Match: A0A5Q4EY97_9GAMM (EAL domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A5Q4EY97_9GAMM) HSP 1 Score: 63.9 bits (154), Expect = 9.360e-9 Identity = 50/160 (31.25%), Postives = 75/160 (46.88%), Query Frame = 1
Query: 16 PERPLLLLDPPLSLDTLLAARAAGADDCVGCDSPAQLRHLEQVVLRELASQDCRRQLRQARSRLADFEARHEKLTDSTGDAVACIQEGIVVRANAALAERLGVDDPAALTGQPLIDLVAASQQADIKARLRAVLKGAASSEPLQLQLAGRHG-VVTVEAQ 492
P PLL + + T+ AGA D + S A R L+ V REL + R L + + + + + + + DA+A +QEGIVV N A E G D A+ GQPL+DL + +K L A ++G + L+ Q G +T+E Q
Sbjct: 163 PGLPLLCIRQSVDESTIARDLDAGAQDTL---SLAHTRRLQAVASRELRAYRLERALNNTQRSASRYRQQLQAFMEGSADAIATVQEGIVVEVNPAWLELFGYADEEAVVGQPLMDLFESGSHTALKGALVAAMQGKWEDQSLRAQALTSDGSALTIELQ 319
BLAST of mRNA_P-wetherbeei_contig54814.1.1 vs. uniprot
Match: UPI0008266E4A (EAL domain-containing protein n=3 Tax=Endozoicomonas TaxID=305899 RepID=UPI0008266E4A) HSP 1 Score: 63.5 bits (153), Expect = 1.240e-8 Identity = 43/110 (39.09%), Postives = 61/110 (55.45%), Query Frame = 1
Query: 79 AAGADDCVGCDSPAQLRHLEQVVLRELASQDCRRQLRQARSRLADFEARHEKLTDSTGDAVACIQEGIVVRANAALAERLGVDDPAALTGQPLIDLVAASQQADIKARLR 408
+AGA D + + + H VLREL S + RR L AR L + R + L + +A+A I +G+ V ANAA + G D+ L G PLID++AA QA+IK L+
Sbjct: 101 SAGARDAIPSSNEEHILH---AVLRELTSLEDRRNLNSARQELNESNKRCQLLLANASEAIAYIHDGMHVDANAAYLQLTGYDNADDLAGIPLIDMIAAQHQAEIKQMLK 207
BLAST of mRNA_P-wetherbeei_contig54814.1.1 vs. uniprot
Match: A0A0S8F3U3_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium SG8_31 TaxID=1703405 RepID=A0A0S8F3U3_9GAMM) HSP 1 Score: 63.2 bits (152), Expect = 1.660e-8 Identity = 46/130 (35.38%), Postives = 68/130 (52.31%), Query Frame = 1
Query: 58 DTLLAARAAGADDCVGCDSPAQLRHLEQVVLRELASQDCRRQLRQARSRLADFEARHEKLTDSTGDAVACIQEGIVVRANAALAERLGVDDPAALTGQPLIDLVAASQQADIKARLRAVLKGAASSEPLQ 447
D L A AGA D V +P+Q + L +V REL + R LR+A A + + + + DA+A +QEG+V+ AN A + G DD L G P++DL A A +K L A +G ++PL+
Sbjct: 24 DQLSADIIAGAADLV---APSQRQRLFRVFQRELRAARLGRALREAVGTAASYREQLKTFMAGSADAIAHVQEGVVLDANPAWTQLFGRDDMTTLLGTPIMDLFATESHASLKGALVACTQGRWPTDPLR 150 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54814.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54814.1.1 >prot_P-wetherbeei_contig54814.1.1 ID=prot_P-wetherbeei_contig54814.1.1|Name=mRNA_P-wetherbeei_contig54814.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=171bp CRRLLPERPLLLLDPPLSLDTLLAARAAGADDCVGCDSPAQLRHLEQVVLback to top mRNA from alignment at P-wetherbeei_contig54814:16..528+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54814.1.1 ID=mRNA_P-wetherbeei_contig54814.1.1|Name=mRNA_P-wetherbeei_contig54814.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig54814:16..528+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54814:16..528+ >mRNA_P-wetherbeei_contig54814.1.1 ID=mRNA_P-wetherbeei_contig54814.1.1|Name=mRNA_P-wetherbeei_contig54814.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig54814:16..528+ (Phaeothamnion wetherbeei SAG_119_79)back to top |