mRNA_P-wetherbeei_contig5481.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5481.3.1 vs. uniprot
Match: D7G418_ECTSI (Ribonucleoside-diphosphate reductase small chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G418_ECTSI) HSP 1 Score: 339 bits (869), Expect = 1.110e-112 Identity = 159/190 (83.68%), Postives = 173/190 (91.05%), Query Frame = 1
Query: 1 PFVEAICREDSSRFVLFPIKHPDLWQMYKQAKASFWTVEEVDLSQDMSDWERLNPAERHFISMVLAFFAASDGIVMENLVHRFCQEVQLPEARCFYGFQVAMESIHQEMYALLLETYVKDRDERSGLFNAYKDIPCVRRKADWALRFIGSGASFAERLVAFAAVEGIFFSGSFCAIFWLRKRGLMPGLTF 570
PFVE ICR D SRFVLFPIKHP+LW MYK+AKASFWTVEEVDLSQD DWE L E+HFISMVLAFFAASDGIVMENLV RF QEVQLPEARCFYGFQ+AMESIHQEMYALLL+TY+KD+ ER LFNAY DIPCV++KADWA+R+IGS A+FAERLVAFAAVEG+FFSGSFCAIFWL+KRGLMPGLTF
Sbjct: 178 PFVEPICRADPSRFVLFPIKHPELWDMYKKAKASFWTVEEVDLSQDSRDWEALTGNEQHFISMVLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDKQERDNLFNAYNDIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGVFFSGSFCAIFWLKKRGLMPGLTF 367
BLAST of mRNA_P-wetherbeei_contig5481.3.1 vs. uniprot
Match: A0A7S2WPD1_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPD1_9STRA) HSP 1 Score: 320 bits (820), Expect = 5.570e-106 Identity = 143/190 (75.26%), Postives = 171/190 (90.00%), Query Frame = 1
Query: 1 PFVEAICREDSSRFVLFPIKHPDLWQMYKQAKASFWTVEEVDLSQDMSDWERLNPAERHFISMVLAFFAASDGIVMENLVHRFCQEVQLPEARCFYGFQVAMESIHQEMYALLLETYVKDRDERSGLFNAYKDIPCVRRKADWALRFIGSGASFAERLVAFAAVEGIFFSGSFCAIFWLRKRGLMPGLTF 570
PFVE ICRED+SRF LFP++HP LW MYKQ +ASFWT EEVD+S D DWE L+ +E+HF+ MVLAFFA+SDG+VMENL HRFC+EVQLPEARCFYGFQ+AME++HQEMY+LLL+TY++D DER+ LF+AY+ +P V+ KADWALR+IGS ASFA+RLVAFAAVEGIFFSGSFCAI+WL+KRGLMPGLTF
Sbjct: 121 PFVEPICREDASRFALFPVRHPSLWNMYKQHEASFWTAEEVDVSGDRRDWESLSESEQHFVKMVLAFFASSDGVVMENLAHRFCREVQLPEARCFYGFQIAMEAVHQEMYSLLLDTYIRDPDERAQLFHAYQHVPAVKAKADWALRWIGSDASFAKRLVAFAAVEGIFFSGSFCAIYWLKKRGLMPGLTF 310
BLAST of mRNA_P-wetherbeei_contig5481.3.1 vs. uniprot
Match: A0A835YXN6_9STRA (Ferritin-like superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXN6_9STRA) HSP 1 Score: 317 bits (813), Expect = 6.330e-106 Identity = 148/189 (78.31%), Postives = 167/189 (88.36%), Query Frame = 1
Query: 4 FVEAICREDSSRFVLFPIKHPDLWQMYKQAKASFWTVEEVDLSQDMSDWERLNPAERHFISMVLAFFAASDGIVMENLVHRFCQEVQLPEARCFYGFQVAMESIHQEMYALLLETYVKDRDERSGLFNAYKDIPCVRRKADWALRFIGSGASFAERLVAFAAVEGIFFSGSFCAIFWLRKRGLMPGLTF 570
+VE +CR D SRFVLFPIKHP LW MYK+A+ASFWT EEVDL D +DWE+L+ E+HFISMVLAFFA+SDGIVMENLVHRFC EVQ PEARCFYGFQ+AMESIHQEMYA LL+ Y+KDR+E+ LFNA+ I C++RKADWA R+IGS ASFAERLVAFAAVEGIFFSGSFCAIFWL+KRGLMPGLTF
Sbjct: 51 WVEPLCRPDRSRFVLFPIKHPKLWDMYKKAEASFWTAEEVDLGADAADWEKLSRQEKHFISMVLAFFASSDGIVMENLVHRFCAEVQAPEARCFYGFQIAMESIHQEMYAALLDAYIKDRNEKDTLFNAHLKIHCIKRKADWAERWIGSTASFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTF 239
BLAST of mRNA_P-wetherbeei_contig5481.3.1 vs. uniprot
Match: A0A7S3AWH4_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AWH4_9EUKA) HSP 1 Score: 293 bits (749), Expect = 1.920e-96 Identity = 136/189 (71.96%), Postives = 158/189 (83.60%), Query Frame = 1
Query: 4 FVEAICREDSSRFVLFPIKHPDLWQMYKQAKASFWTVEEVDLSQDMSDWERLNPAERHFISMVLAFFAASDGIVMENLVHRFCQEVQLPEARCFYGFQVAMESIHQEMYALLLETYVKDRDERSGLFNAYKDIPCVRRKADWALRFIGSGASFAERLVAFAAVEGIFFSGSFCAIFWLRKRGLMPGLTF 570
+VE ICR D SRFVLFPI+ PD+W+MYKQ +ASFWT EE+DL D +DW L+ ERHFIS VLAFFAASDGIV+ENL RFC++VQLPEARCFYGFQ+AME++H E Y+LL+ETY+ D ER+ L A + CVR KADWALR+IGS ASFAERLV FAAVEGIFFSGSFCA+FWL+KRGLMPGLTF
Sbjct: 11 WVEPICRVDRSRFVLFPIRQPDIWKMYKQHEASFWTAEEIDLGPDRNDWLTLSSGERHFISSVLAFFAASDGIVVENLAERFCRDVQLPEARCFYGFQIAMENVHAETYSLLIETYIDDAAERTKLLEAVEHNACVRAKADWALRWIGSSASFAERLVGFAAVEGIFFSGSFCALFWLKKRGLMPGLTF 199
BLAST of mRNA_P-wetherbeei_contig5481.3.1 vs. uniprot
Match: A0A164X8N6_9CRUS (Ribonucleoside-diphosphate reductase subunit M2 n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A164X8N6_9CRUS) HSP 1 Score: 289 bits (740), Expect = 2.160e-96 Identity = 135/188 (71.81%), Postives = 164/188 (87.23%), Query Frame = 1
Query: 10 EAICREDSSRFVLFPIKHPDLWQMYKQAKASFWTVEEVDLSQDMSDWERLNPAERHFISMVLAFFAASDGIVMENLVHRFCQEVQLPEARCFYGFQVAMESIHQEMYALLLETYVKDRDERSGLFNAYKDIPCVRRKADWALRFIGS-GASFAERLVAFAAVEGIFFSGSFCAIFWLRKRGLMPGLTF 570
E + R + SRFVLFPI++ D+WQMYK+A+ASFWT EEVDLS+D++DW++L P E+HFIS VLAFFAASDGIV ENLV RF QEVQ+PEARCFYGFQ+AME+IH EMY+LL+ETY+KD ER LFNA + +PCV +KADWA+R+IG+ A ++ER+VAFAAVEGIFFSGSF AIFWL+KRGLMPGLTF
Sbjct: 55 EPLLRPNPSRFVLFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLNDWDKLQPNEKHFISHVLAFFAASDGIVNENLVERFAQEVQVPEARCFYGFQIAMENIHSEMYSLLIETYIKDSAERMKLFNAVETMPCVAKKADWAMRWIGNRDAPYSERIVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTF 242
BLAST of mRNA_P-wetherbeei_contig5481.3.1 vs. uniprot
Match: A0A1Z5K6B2_FISSO (Ribonucleoside-diphosphate reductase beta chain n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K6B2_FISSO) HSP 1 Score: 294 bits (752), Expect = 2.420e-96 Identity = 138/191 (72.25%), Postives = 161/191 (84.29%), Query Frame = 1
Query: 1 PFVEAICR-EDSSRFVLFPIKHPDLWQMYKQAKASFWTVEEVDLSQDMSDWERLNPAERHFISMVLAFFAASDGIVMENLVHRFCQEVQLPEARCFYGFQVAMESIHQEMYALLLETYVKDRDERSGLFNAYKDIPCVRRKADWALRFIGSGASFAERLVAFAAVEGIFFSGSFCAIFWLRKRGLMPGLTF 570
PFVE ICR +D SRF LFPI+H DLW MYKQ ASFWT +E+DLSQD++DW+ L +ERHFISMVLAFFA +DGIV+ENL RFC+EV +PEARCFYGFQ+AMESIHQE Y LL++TY+ + +R LF A+ +P VRRKA WA R+IGS ASFAERLVAFAAVEGIFFSG+FCAIFWL+KRGLMPGLTF
Sbjct: 62 PFVEPICRTDDDSRFSLFPIQHADLWNMYKQHVASFWTADEIDLSQDVTDWQSLTSSERHFISMVLAFFAGADGIVVENLAERFCREVTVPEARCFYGFQMAMESIHQETYCLLIDTYITNPSDRQVLFAAHTQVPSVRRKAAWAQRYIGSEASFAERLVAFAAVEGIFFSGAFCAIFWLKKRGLMPGLTF 252
BLAST of mRNA_P-wetherbeei_contig5481.3.1 vs. uniprot
Match: UPI001D085298 (ribonucleoside-diphosphate reductase subunit M2 B n=1 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D085298) HSP 1 Score: 292 bits (747), Expect = 9.850e-96 Identity = 136/191 (71.20%), Postives = 164/191 (85.86%), Query Frame = 1
Query: 1 PFVEAICREDSSRFVLFPIKHPDLWQMYKQAKASFWTVEEVDLSQDMSDWERLNPAERHFISMVLAFFAASDGIVMENLVHRFCQEVQLPEARCFYGFQVAMESIHQEMYALLLETYVKDRDERSGLFNAYKDIPCVRRKADWALRFIGS-GASFAERLVAFAAVEGIFFSGSFCAIFWLRKRGLMPGLTF 570
P +E + RE+ RFV+FPI++PD+WQMYK+A+ASFWTVEEVDLS+DM DW+ L ERHFIS VLAFFAASDGIV ENLV RF QEVQLPEARCFYGFQ+AME++H EMY+LL++TY++D +R LFNA + +PCV++KADWAL +I S A+F ER+VAFAAVEGIFFSGSF AIFWL+KRGLMPGLTF
Sbjct: 68 PQLEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDMKDWDSLKDGERHFISHVLAFFAASDGIVNENLVERFSQEVQLPEARCFYGFQIAMENVHSEMYSLLIDTYIRDPHQRDFLFNAIETLPCVKQKADWALNWISSKNATFGERIVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTF 258
BLAST of mRNA_P-wetherbeei_contig5481.3.1 vs. uniprot
Match: F0ZS91_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZS91_DICPU) HSP 1 Score: 288 bits (737), Expect = 5.730e-95 Identity = 132/188 (70.21%), Postives = 161/188 (85.64%), Query Frame = 1
Query: 10 EAICREDSSRFVLFPIKHPDLWQMYKQAKASFWTVEEVDLSQDMSDWE-RLNPAERHFISMVLAFFAASDGIVMENLVHRFCQEVQLPEARCFYGFQVAMESIHQEMYALLLETYVKDRDERSGLFNAYKDIPCVRRKADWALRFIGSGASFAERLVAFAAVEGIFFSGSFCAIFWLRKRGLMPGLTF 570
E I +E+ RFVLFPIK+PD+W MYKQA+ASFWT EE+DL+ D++DW +LN ERHFIS VLAFFAASDGIV ENL RF EVQ+PEARCFYGFQ+A+E+IH E Y+LL++TY+KD +++S LFNA IPC+++KADWAL++I + SFAERLVAFAAVEGIFFSGSFC+IFWL+KRGLMPGLTF
Sbjct: 7 EPILKENKDRFVLFPIKYPDIWSMYKQAEASFWTAEEIDLAPDLNDWSSKLNDNERHFISNVLAFFAASDGIVNENLATRFMSEVQIPEARCFYGFQIAIENIHSETYSLLIDTYIKDNEQKSKLFNAIDTIPCIKKKADWALKWINNSDSFAERLVAFAAVEGIFFSGSFCSIFWLKKRGLMPGLTF 194
BLAST of mRNA_P-wetherbeei_contig5481.3.1 vs. uniprot
Match: A0A182Y867_ANOST (Uncharacterized protein n=7 Tax=Cellia TaxID=44534 RepID=A0A182Y867_ANOST) HSP 1 Score: 290 bits (741), Expect = 6.630e-95 Identity = 133/191 (69.63%), Postives = 165/191 (86.39%), Query Frame = 1
Query: 1 PFVEAICREDSSRFVLFPIKHPDLWQMYKQAKASFWTVEEVDLSQDMSDWERLNPAERHFISMVLAFFAASDGIVMENLVHRFCQEVQLPEARCFYGFQVAMESIHQEMYALLLETYVKDRDERSGLFNAYKDIPCVRRKADWALRFIGSG-ASFAERLVAFAAVEGIFFSGSFCAIFWLRKRGLMPGLTF 570
P +E + R++ RFV+FPI++PD+WQMYK+A+ASFWTVEEVDLS+DM DW+ L P+ERHFIS VLAFFAASDGIV ENLV RF QEVQ+ EARCFYGFQ+AME++H EMY+LL++TY++D +R LFNA + +PCV++KADWAL +I S A+F ER+VAFAAVEGIFFSGSF +IFWL+KRGLMPGLTF
Sbjct: 62 PSIEPLLRDNPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDMKDWDSLKPSERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDSKQREFLFNAIETLPCVKKKADWALNWISSKKANFGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTF 252
BLAST of mRNA_P-wetherbeei_contig5481.3.1 vs. uniprot
Match: M2Y0G0_GALSU (Ribonucleotide reductase small subunit n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y0G0_GALSU) HSP 1 Score: 289 bits (740), Expect = 7.110e-95 Identity = 130/190 (68.42%), Postives = 161/190 (84.74%), Query Frame = 1
Query: 1 PFVEAICREDSSRFVLFPIKHPDLWQMYKQAKASFWTVEEVDLSQDMSDWERLNPAERHFISMVLAFFAASDGIVMENLVHRFCQEVQLPEARCFYGFQVAMESIHQEMYALLLETYVKDRDERSGLFNAYKDIPCVRRKADWALRFIGSGASFAERLVAFAAVEGIFFSGSFCAIFWLRKRGLMPGLTF 570
PFV C S R+ LFPI+HP++W+MYK+ +ASFWT EE+DLS D+ DW++LN ERHFIS VLAFFA+SDGIV+ENL RFC++VQ+PEARCFYGFQ+AME+IH E Y+LL++TY++D E++ LF A + IPC+ +KA WALR+I S ASFAERLVAFAAVEGIFFSGSFC+IFWL+KRGLMPGLTF
Sbjct: 55 PFV--FCSGSSERYTLFPIRHPEIWKMYKKHEASFWTAEEIDLSSDLEDWKKLNADERHFISHVLAFFASSDGIVLENLAERFCRDVQIPEARCFYGFQIAMENIHSETYSLLIDTYIRDAQEKARLFEAMERIPCIEKKAQWALRWIQSSASFAERLVAFAAVEGIFFSGSFCSIFWLKKRGLMPGLTF 242 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5481.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5481.3.1 >prot_P-wetherbeei_contig5481.3.1 ID=prot_P-wetherbeei_contig5481.3.1|Name=mRNA_P-wetherbeei_contig5481.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=190bp PFVEAICREDSSRFVLFPIKHPDLWQMYKQAKASFWTVEEVDLSQDMSDWback to top mRNA from alignment at P-wetherbeei_contig5481:2565..3701+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5481.3.1 ID=mRNA_P-wetherbeei_contig5481.3.1|Name=mRNA_P-wetherbeei_contig5481.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1137bp|location=Sequence derived from alignment at P-wetherbeei_contig5481:2565..3701+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5481:2565..3701+ >mRNA_P-wetherbeei_contig5481.3.1 ID=mRNA_P-wetherbeei_contig5481.3.1|Name=mRNA_P-wetherbeei_contig5481.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=570bp|location=Sequence derived from alignment at P-wetherbeei_contig5481:2565..3701+ (Phaeothamnion wetherbeei SAG_119_79)back to top |