mRNA_P-wetherbeei_contig54790.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig54790.1.1
Unique NamemRNA_P-wetherbeei_contig54790.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig54790.1.1 vs. uniprot
Match: A0A382KMX8_9ZZZZ (AB hydrolase-1 domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382KMX8_9ZZZZ)

HSP 1 Score: 68.9 bits (167), Expect = 1.130e-13
Identity = 26/38 (68.42%), Postives = 32/38 (84.21%), Query Frame = 1
Query:    1 MSFVTMNGVDLYYELHGEGPPVVFIHGASGMHLSWWQQ 114
            M+F  +NGV +YYE+HGEGPPVVF HG+ G H+SWWQQ
Sbjct:    1 MAFADVNGVSMYYEVHGEGPPVVFAHGSGGNHISWWQQ 38          
BLAST of mRNA_P-wetherbeei_contig54790.1.1 vs. uniprot
Match: A0A1F4E5X3_9PROT (AB hydrolase-1 domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4E5X3_9PROT)

HSP 1 Score: 67.0 bits (162), Expect = 4.090e-12
Identity = 27/38 (71.05%), Postives = 32/38 (84.21%), Query Frame = 1
Query:    1 MSFVTMNGVDLYYELHGEGPPVVFIHGASGMHLSWWQQ 114
            MS + ++G +LYYELHGEGP +V IHGASG HLSWWQQ
Sbjct:    1 MSILNVDGAELYYELHGEGPALVLIHGASGTHLSWWQQ 38          
BLAST of mRNA_P-wetherbeei_contig54790.1.1 vs. uniprot
Match: A0A2E9YPS9_9CHLR (AB hydrolase-1 domain-containing protein n=10 Tax=root TaxID=1 RepID=A0A2E9YPS9_9CHLR)

HSP 1 Score: 65.9 bits (159), Expect = 8.650e-12
Identity = 25/38 (65.79%), Postives = 31/38 (81.58%), Query Frame = 1
Query:    1 MSFVTMNGVDLYYELHGEGPPVVFIHGASGMHLSWWQQ 114
            M+F  +NGV +YYE+HGEGP VVF HG+ G H+SWWQQ
Sbjct:    1 MAFADVNGVSMYYEVHGEGPSVVFAHGSGGNHISWWQQ 38          
BLAST of mRNA_P-wetherbeei_contig54790.1.1 vs. uniprot
Match: A0A641AJ40_9CHLR (Alpha/beta hydrolase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A641AJ40_9CHLR)

HSP 1 Score: 65.9 bits (159), Expect = 8.650e-12
Identity = 25/38 (65.79%), Postives = 31/38 (81.58%), Query Frame = 1
Query:    1 MSFVTMNGVDLYYELHGEGPPVVFIHGASGMHLSWWQQ 114
            M+F  +NGV +YYE+HGEG PVVF HG+ G H+SWWQQ
Sbjct:    1 MAFADVNGVSMYYEVHGEGTPVVFAHGSGGNHISWWQQ 38          
BLAST of mRNA_P-wetherbeei_contig54790.1.1 vs. uniprot
Match: A0A7V1QQ06_9CHLR (Alpha/beta hydrolase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A7V1QQ06_9CHLR)

HSP 1 Score: 65.9 bits (159), Expect = 1.190e-11
Identity = 27/38 (71.05%), Postives = 30/38 (78.95%), Query Frame = 1
Query:    1 MSFVTMNGVDLYYELHGEGPPVVFIHGASGMHLSWWQQ 114
            M  V +NG+DLYYE+HG GP VVF HGA G HLSWWQQ
Sbjct:   38 MPTVHVNGIDLYYEVHGRGPAVVFCHGAGGNHLSWWQQ 75          
BLAST of mRNA_P-wetherbeei_contig54790.1.1 vs. uniprot
Match: A0A3D1M0N0_9CHLR (AB hydrolase-1 domain-containing protein n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A3D1M0N0_9CHLR)

HSP 1 Score: 65.1 bits (157), Expect = 1.670e-11
Identity = 24/38 (63.16%), Postives = 31/38 (81.58%), Query Frame = 1
Query:    1 MSFVTMNGVDLYYELHGEGPPVVFIHGASGMHLSWWQQ 114
            M+F  +NG+ +YYE+HGEG PVVF HG+ G H+SWWQQ
Sbjct:    1 MAFAEVNGISMYYEVHGEGVPVVFAHGSGGNHISWWQQ 38          
BLAST of mRNA_P-wetherbeei_contig54790.1.1 vs. uniprot
Match: A0A2E7SBE0_9CHLR (Hydrolase_4 domain-containing protein (Fragment) n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A2E7SBE0_9CHLR)

HSP 1 Score: 64.3 bits (155), Expect = 3.010e-11
Identity = 24/38 (63.16%), Postives = 29/38 (76.32%), Query Frame = 1
Query:    1 MSFVTMNGVDLYYELHGEGPPVVFIHGASGMHLSWWQQ 114
            M   T+NG+++YYE+HG GPPVVF HG  G H SWWQQ
Sbjct:    1 MPTATINGIEMYYEIHGSGPPVVFSHGRGGNHFSWWQQ 38          
BLAST of mRNA_P-wetherbeei_contig54790.1.1 vs. uniprot
Match: A0A3L7X0Q0_9CHLR (Alpha/beta hydrolase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3L7X0Q0_9CHLR)

HSP 1 Score: 62.0 bits (149), Expect = 3.910e-11
Identity = 23/34 (67.65%), Postives = 28/34 (82.35%), Query Frame = 1
Query:   13 TMNGVDLYYELHGEGPPVVFIHGASGMHLSWWQQ 114
            T+NG+D YYE+ GEGP V F+HGA G H+SWWQQ
Sbjct:   20 TLNGIDFYYEVTGEGPTVTFLHGAGGNHISWWQQ 53          
BLAST of mRNA_P-wetherbeei_contig54790.1.1 vs. uniprot
Match: A0A4S3TL82_9EURY (Alpha/beta hydrolase n=1 Tax=Salinadaptatus halalkaliphilus TaxID=2419781 RepID=A0A4S3TL82_9EURY)

HSP 1 Score: 63.9 bits (154), Expect = 4.230e-11
Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = 1
Query:   10 VTMNGVDLYYELHGEGPPVVFIHGASGMHLSWWQQ 114
            V +NG+DLYY+  GEGPPVVF+HG SG HLSWWQQ
Sbjct:    6 VQVNGIDLYYQDVGEGPPVVFVHGFSGNHLSWWQQ 40          
BLAST of mRNA_P-wetherbeei_contig54790.1.1 vs. uniprot
Match: A0A521WKQ9_9CHLR (Alpha/beta hydrolase (Fragment) n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A521WKQ9_9CHLR)

HSP 1 Score: 63.2 bits (152), Expect = 6.070e-11
Identity = 25/38 (65.79%), Postives = 30/38 (78.95%), Query Frame = 1
Query:    1 MSFVTMNGVDLYYELHGEGPPVVFIHGASGMHLSWWQQ 114
            M + ++NG++LYYE HGEGP VVF HGA G  LSWWQQ
Sbjct:    1 MPYASVNGIELYYESHGEGPAVVFAHGAGGNSLSWWQQ 38          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54790.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A382KMX8_9ZZZZ1.130e-1368.42AB hydrolase-1 domain-containing protein (Fragment... [more]
A0A1F4E5X3_9PROT4.090e-1271.05AB hydrolase-1 domain-containing protein n=1 Tax=B... [more]
A0A2E9YPS9_9CHLR8.650e-1265.79AB hydrolase-1 domain-containing protein n=10 Tax=... [more]
A0A641AJ40_9CHLR8.650e-1265.79Alpha/beta hydrolase n=2 Tax=Chloroflexi TaxID=200... [more]
A0A7V1QQ06_9CHLR1.190e-1171.05Alpha/beta hydrolase n=2 Tax=Chloroflexi TaxID=200... [more]
A0A3D1M0N0_9CHLR1.670e-1163.16AB hydrolase-1 domain-containing protein n=2 Tax=C... [more]
A0A2E7SBE0_9CHLR3.010e-1163.16Hydrolase_4 domain-containing protein (Fragment) n... [more]
A0A3L7X0Q0_9CHLR3.910e-1167.65Alpha/beta hydrolase n=1 Tax=Chloroflexi bacterium... [more]
A0A4S3TL82_9EURY4.230e-1174.29Alpha/beta hydrolase n=1 Tax=Salinadaptatus halalk... [more]
A0A521WKQ9_9CHLR6.070e-1165.79Alpha/beta hydrolase (Fragment) n=1 Tax=Dehalococc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig54790contigP-wetherbeei_contig54790:415..528 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1120949.KB903301_gene6374
PFAMsAbhydrolase_1,Abhydrolase_6
Model size114
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue3.66e-10
EggNOG OGsCOG0596@1|root,COG0596@2|Bacteria,2I9EM@201174|Actinobacteria
DescriptionSerine aminopeptidase, S33
Cds size114
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186817.6686745-CDS-P-wetherbeei_contig54790:414..5281683186817.6686745-CDS-P-wetherbeei_contig54790:414..528Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig54790 415..528 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig54790.1.1prot_P-wetherbeei_contig54790.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig54790 415..528 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig54790.1.1

>prot_P-wetherbeei_contig54790.1.1 ID=prot_P-wetherbeei_contig54790.1.1|Name=mRNA_P-wetherbeei_contig54790.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=38bp
MSFVTMNGVDLYYELHGEGPPVVFIHGASGMHLSWWQQ
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mRNA from alignment at P-wetherbeei_contig54790:415..528+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig54790.1.1 ID=mRNA_P-wetherbeei_contig54790.1.1|Name=mRNA_P-wetherbeei_contig54790.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=114bp|location=Sequence derived from alignment at P-wetherbeei_contig54790:415..528+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGTTTGTAACAATGAACGGTGTCGATCTCTATTATGAATTGCACGG CGAAGGCCCGCCGGTGGTGTTCATACATGGCGCGAGCGGCATGCACCTGT CGTGGTGGCAACAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig54790:415..528+

>mRNA_P-wetherbeei_contig54790.1.1 ID=mRNA_P-wetherbeei_contig54790.1.1|Name=mRNA_P-wetherbeei_contig54790.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=114bp|location=Sequence derived from alignment at P-wetherbeei_contig54790:415..528+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGTTTGTAACAATGAACGGTGTCGATCTCTATTATGAATTGCACGG
CGAAGGCCCGCCGGTGGTGTTCATACATGGCGCGAGCGGCATGCACCTGT
CGTGGTGGCAACAG
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