mRNA_P-wetherbeei_contig54733.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig54733.1.1
Unique NamemRNA_P-wetherbeei_contig54733.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig54733.1.1 vs. uniprot
Match: A0A1V0B800_9PSED (Toxin HipA n=3 Tax=Pseudomonas TaxID=286 RepID=A0A1V0B800_9PSED)

HSP 1 Score: 280 bits (716), Expect = 1.060e-90
Identity = 138/174 (79.31%), Postives = 155/174 (89.08%), Query Frame = 1
Query:    1 KSRTASKISVDALVQLASEVLTHRNELQTSFTGAARKKALNDILMVGTSAGGARAKAVIAWHPHTNEVRSGQIAAGDGFEYWLLKFDGVSGNQDKELEDPQGYGAIEYAYHLMAQAAGITMSECRLLEEHGRRHFMTRRFDRLPGGAKLHMQSLCALAHFDFNQAGAYAYEQAL 522
            ++R + ++S+DALV+LASEVL HRN+L+ SF  A +  AL DIL VGTSAGGARAKAVIAW P TNEVRSGQ+ AG+GFEYWLLKFDGVSGN+DKEL+DPQGY AIEYAY+LMA+ AGI MSECRLLEE GRRHFMTRRFDRLPGG KLHMQSLCALAHFDFNQAGAY+YEQAL
Sbjct:  123 QARESERVSIDALVELASEVLAHRNDLKGSFADADKAAALRDILRVGTSAGGARAKAVIAWQPQTNEVRSGQVEAGEGFEYWLLKFDGVSGNRDKELDDPQGYCAIEYAYYLMAREAGIDMSECRLLEEGGRRHFMTRRFDRLPGGGKLHMQSLCALAHFDFNQAGAYSYEQAL 296          
BLAST of mRNA_P-wetherbeei_contig54733.1.1 vs. uniprot
Match: A0A2A2Q9G3_9BACT (Toxin HipA n=1 Tax=Opitutae bacterium Tous-C1TDCM TaxID=1982319 RepID=A0A2A2Q9G3_9BACT)

HSP 1 Score: 279 bits (714), Expect = 1.290e-90
Identity = 139/174 (79.89%), Postives = 156/174 (89.66%), Query Frame = 1
Query:    7 RTASKISVDALVQLASEVLTHRNELQTSFTGAARKKALNDILMVGTSAGGARAKAVIAWHPHTNEVRSGQIAAGDGFEYWLLKFDGVSGNQDKELEDPQGYGAIEYAYHLMAQAAGITMSECRLLEEHGRRHFMTRRFDRLPGGAKLHMQSLCALAHFDFNQAGAYAYEQALLS 528
            R A+ I +DALVQLASE+L+ R  L+ SF G AR KALNDIL VGTSAGGARAKAVIAW+P T+EVRSGQIAAGDGFEYWLLKFDGVS N+DKEL+DPQGYGA+EYAYHLMA+AAGITMS+CRLLEE+GRRHFMTRRFDR  GG KLH+QSLCAL H DFNQAGA+AYEQA+L+
Sbjct:  107 RRAAGIEIDALVQLASEILSQRGALRGSFAGPARVKALNDILRVGTSAGGARAKAVIAWNPATHEVRSGQIAAGDGFEYWLLKFDGVSANRDKELDDPQGYGAVEYAYHLMARAAGITMSDCRLLEENGRRHFMTRRFDRPAGGGKLHLQSLCALTHADFNQAGAHAYEQAILA 280          
BLAST of mRNA_P-wetherbeei_contig54733.1.1 vs. uniprot
Match: A0A849XYQ5_9BACT (Type II toxin-antitoxin system HipA family toxin n=1 Tax=Verrucomicrobiae bacterium TaxID=2499141 RepID=A0A849XYQ5_9BACT)

HSP 1 Score: 279 bits (713), Expect = 2.910e-90
Identity = 142/174 (81.61%), Postives = 154/174 (88.51%), Query Frame = 1
Query:    7 RTASKISVDALVQLASEVLTHRNELQTSFTGAARKKALNDILMVGTSAGGARAKAVIAWHPHTNEVRSGQIAAGDGFEYWLLKFDGVSGNQDKELEDPQGYGAIEYAYHLMAQAAGITMSECRLLEEHGRRHFMTRRFDRLPGGAKLHMQSLCALAHFDFNQAGAYAYEQALLS 528
            RTA+KI +DALV+LASEVLTHR  L+  FTG+AR KALNDIL VGTSA GARAKAVIAW+  TNEVRSGQIAAG GFEYWLLKFDGV+GN+DKE EDP+GYGAIEYAYHLMA+AAGI MSECRLLEE GRRHFMTRRFDRL GG KLHMQSL AL HFDFNQ GA+AYEQA L+
Sbjct:  123 RTATKIEIDALVKLASEVLTHRGGLKWDFTGSARGKALNDILRVGTSAAGARAKAVIAWNRQTNEVRSGQIAAGPGFEYWLLKFDGVTGNKDKESEDPKGYGAIEYAYHLMARAAGIVMSECRLLEEKGRRHFMTRRFDRLAGGEKLHMQSLGALMHFDFNQPGAHAYEQAFLA 296          
BLAST of mRNA_P-wetherbeei_contig54733.1.1 vs. uniprot
Match: A0A2U8E683_9BACT (Toxin HipA n=1 Tax=Ereboglobus luteus TaxID=1796921 RepID=A0A2U8E683_9BACT)

HSP 1 Score: 278 bits (711), Expect = 6.010e-90
Identity = 136/172 (79.07%), Postives = 152/172 (88.37%), Query Frame = 1
Query:    7 RTASKISVDALVQLASEVLTHRNELQTSFTGAARKKALNDILMVGTSAGGARAKAVIAWHPHTNEVRSGQIAAGDGFEYWLLKFDGVSGNQDKELEDPQGYGAIEYAYHLMAQAAGITMSECRLLEEHGRRHFMTRRFDRLPGGAKLHMQSLCALAHFDFNQAGAYAYEQAL 522
            R A KI +DALV+LASEVL HRN+L+ +F+   R ++L DIL VGTSAGGARAKAVIAW+P TNEVRSGQ+ AGDGFEYWLLKFDGVS N+DKEL DP+GYGAIEYAY LMA+ AGI MSECRLLEEHGRRHFMTRRFDRLPGG KLHMQSLCA+AH+DFN AGAY+YEQAL
Sbjct:  125 RAAKKIEIDALVKLASEVLQHRNDLKGTFSDGKRAQSLKDILRVGTSAGGARAKAVIAWNPLTNEVRSGQVGAGDGFEYWLLKFDGVSNNRDKELADPKGYGAIEYAYSLMAREAGIAMSECRLLEEHGRRHFMTRRFDRLPGGGKLHMQSLCAMAHYDFNSAGAYSYEQAL 296          
BLAST of mRNA_P-wetherbeei_contig54733.1.1 vs. uniprot
Match: UPI0019C87CB9 (Type II toxin-antitoxin system HipA family toxin n=1 Tax=Candidatus Kapabacteria bacterium TaxID=2447898 RepID=UPI0019C87CB9)

HSP 1 Score: 274 bits (700), Expect = 8.880e-90
Identity = 134/173 (77.46%), Postives = 156/173 (90.17%), Query Frame = 1
Query:   10 TASKISVDALVQLASEVLTHRNELQTSFTGAARKKALNDILMVGTSAGGARAKAVIAWHPHTNEVRSGQIAAGDGFEYWLLKFDGVSGNQDKELEDPQGYGAIEYAYHLMAQAAGITMSECRLLEEHGRRHFMTRRFDRLPGGAKLHMQSLCALAHFDFNQAGAYAYEQALLS 528
            TA+ I VDALV+LA EVL H+ ++   F  A ++K+L DIL VGTSAGGARAK+VIAW+P TNEVRSGQIAAGDGFEYWLLKFDGV+GN+DKELEDP+G+GAIE+AYHLMA+AAGITMSECRL+EE+GRRHFMTRRFDRL GG KLHMQSLCALAHFDFNQAG+Y+YEQA+ +
Sbjct:  124 TATTIEVDALVRLAGEVLMHQGDVYGHFHEAGKEKSLRDILSVGTSAGGARAKSVIAWNPLTNEVRSGQIAAGDGFEYWLLKFDGVAGNKDKELEDPKGFGAIEFAYHLMAKAAGITMSECRLMEENGRRHFMTRRFDRLAGGQKLHMQSLCALAHFDFNQAGSYSYEQAMFT 296          
BLAST of mRNA_P-wetherbeei_contig54733.1.1 vs. uniprot
Match: A0A3B0YS53_9ZZZZ (Toxin HigB / Protein kinase domain of HipA (Fragment) n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0YS53_9ZZZZ)

HSP 1 Score: 276 bits (707), Expect = 9.990e-90
Identity = 136/175 (77.71%), Postives = 155/175 (88.57%), Query Frame = 1
Query:    1 KSRTASKISVDALVQLASEVLTHRNELQTSFTGAARKKALNDILMVGTSAGGARAKAVIAWHPHTNEVRSGQIAAGDGFEYWLLKFDGVSGNQDKELEDPQGYGAIEYAYHLMAQAAGITMSECRLLEEHGRRHFMTRRFDRLPGGAKLHMQSLCALAHFDFNQAGAYAYEQALL 525
            K+R AS+I +D LV+LASE+LTHRN LQTSF    R++AL DIL VGTSAGGARAKAVIAW+P T+EVRSGQ+ AG+GFEYWLLKFDGVSGN+DKELEDPQGYG IEYAY+ MA+ +GI +SECRL EE+GRRHFMTRRFDRL GG KLHMQSLCALAH+DFN AGAY+YEQALL
Sbjct:   94 KTRPASRIQIDKLVELASEILTHRNNLQTSFADEGREQALADILRVGTSAGGARAKAVIAWNPSTHEVRSGQVPAGEGFEYWLLKFDGVSGNRDKELEDPQGYGVIEYAYYRMARDSGIDISECRLFEENGRRHFMTRRFDRLAGGEKLHMQSLCALAHYDFNLAGAYSYEQALL 268          
BLAST of mRNA_P-wetherbeei_contig54733.1.1 vs. uniprot
Match: A0A6N4WSB9_9BACT (HIPA PROTEIN n=2 Tax=Lentimonas TaxID=417293 RepID=A0A6N4WSB9_9BACT)

HSP 1 Score: 277 bits (708), Expect = 1.650e-89
Identity = 136/173 (78.61%), Postives = 153/173 (88.44%), Query Frame = 1
Query:    7 RTASKISVDALVQLASEVLTHRNELQTSFTGAARKKALNDILMVGTSAGGARAKAVIAWHPHTNEVRSGQIAAGDGFEYWLLKFDGVSGNQDKELEDPQGYGAIEYAYHLMAQAAGITMSECRLLEEHGRRHFMTRRFDRLPGGAKLHMQSLCALAHFDFNQAGAYAYEQALL 525
            R A++I +DAL+ LAS+VLTHRN LQ +F  + R KAL DIL VGTSAGGARAKAVIAW+  T+EVRSGQ+AA  GFEYWLLKFDGV+GN+DKE+EDP+GYGAIEYAY+LMAQAAGI MSECRLLEEH RRHFMTRRFDRLPGG KLHMQSLCA+AH+DFN AGAYAYEQA L
Sbjct:  123 RKATRIEIDALIDLASDVLTHRNTLQGNFKDSTRAKALKDILRVGTSAGGARAKAVIAWNRQTHEVRSGQVAADTGFEYWLLKFDGVNGNKDKEMEDPKGYGAIEYAYYLMAQAAGIQMSECRLLEEHDRRHFMTRRFDRLPGGEKLHMQSLCAMAHYDFNAAGAYAYEQAFL 295          
BLAST of mRNA_P-wetherbeei_contig54733.1.1 vs. uniprot
Match: A0A7V2JI42_9BACT (Type II toxin-antitoxin system HipA family toxin n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7V2JI42_9BACT)

HSP 1 Score: 275 bits (703), Expect = 9.400e-89
Identity = 135/175 (77.14%), Postives = 155/175 (88.57%), Query Frame = 1
Query:    1 KSRTASKISVDALVQLASEVLTHRNELQTSFTGAARKKALNDILMVGTSAGGARAKAVIAWHPHTNEVRSGQIAAGDGFEYWLLKFDGVSGNQDKELEDPQGYGAIEYAYHLMAQAAGITMSECRLLEEHGRRHFMTRRFDRLPGGAKLHMQSLCALAHFDFNQAGAYAYEQALL 525
            K+R A +I +D LV+LASEVL+HRN+L+ SF  A++++AL DIL VGTSAGGARAKAVIAW+P TNEVRSGQI AG+GFEYWLLKFDGVSGN+DKELEDP+GYG IEYAY+ MA+  GI +SECRL EE+GRRHFMTRRFDRL GG KLHMQSLCALAH+DFN AGAYAYEQALL
Sbjct:  123 KARQAGRIQIDKLVELASEVLSHRNDLRVSFADASQEQALTDILRVGTSAGGARAKAVIAWNPSTNEVRSGQIPAGEGFEYWLLKFDGVSGNRDKELEDPKGYGVIEYAYYKMARDCGIDISECRLFEENGRRHFMTRRFDRLAGGEKLHMQSLCALAHYDFNMAGAYAYEQALL 297          
BLAST of mRNA_P-wetherbeei_contig54733.1.1 vs. uniprot
Match: A0A2N1XJZ9_9GAMM (Toxin HipA n=2 Tax=unclassified Gammaproteobacteria TaxID=33811 RepID=A0A2N1XJZ9_9GAMM)

HSP 1 Score: 275 bits (702), Expect = 1.370e-88
Identity = 135/173 (78.03%), Postives = 154/173 (89.02%), Query Frame = 1
Query:    7 RTASKISVDALVQLASEVLTHRNELQTSFTGAARKKALNDILMVGTSAGGARAKAVIAWHPHTNEVRSGQIAAGDGFEYWLLKFDGVSGNQDKELEDPQGYGAIEYAYHLMAQAAGITMSECRLLEEHGRRHFMTRRFDRLPGGAKLHMQSLCALAHFDFNQAGAYAYEQALL 525
            + A+ I++DALV+LASEVLT R+ L        ++KALNDIL VGTSAGGARAKAVIAWHP T EVRSGQ+AAG+GFEYWLLKFDGV+GN+DKEL+DP+GYGAIEYAYHLMA+AAGI M+ECRLLEE+GRRHFM RRFDRLPGG KLHMQSL ALAHFD+NQAGAY+YEQALL
Sbjct:  124 KRATTIAIDALVRLASEVLTQRSALHGKLADGEQEKALNDILRVGTSAGGARAKAVIAWHPQTGEVRSGQVAAGEGFEYWLLKFDGVAGNKDKELDDPKGYGAIEYAYHLMAKAAGIDMAECRLLEENGRRHFMARRFDRLPGGGKLHMQSLGALAHFDYNQAGAYSYEQALL 296          
BLAST of mRNA_P-wetherbeei_contig54733.1.1 vs. uniprot
Match: W0IU14_9BACT (Toxin HipA n=2 Tax=unclassified Opitutaceae TaxID=278955 RepID=W0IU14_9BACT)

HSP 1 Score: 274 bits (700), Expect = 2.990e-88
Identity = 140/170 (82.35%), Postives = 150/170 (88.24%), Query Frame = 1
Query:   22 ISVDALVQLASEVLTHRNELQTSFTGAA--RKKALNDILMVGTSAGGARAKAVIAWHPHTNEVRSGQIAAGDGFEYWLLKFDGVSGNQDKELEDPQGYGAIEYAYHLMAQAAGITMSECRLLEEHGRRHFMTRRFDRLPGGAKLHMQSLCALAHFDFNQAGAYAYEQALL 525
            I +DALV LASEVL HRNEL+T+F GA   RK AL DIL VGTSAGGARAKAVIAW+P TNEVRSGQ+ AG GFEYWLLKFDGVSGN+DKEL+DP+GYGAIEYAY LMA+AAGI MSECRL EE+GRRHFMTRRFDR   G KLHMQSLCALAHFDFNQAGAYAYEQALL
Sbjct:  130 IRIDALVALASEVLRHRNELRTTFGGAGADRKNALRDILRVGTSAGGARAKAVIAWNPATNEVRSGQVTAGAGFEYWLLKFDGVSGNRDKELDDPKGYGAIEYAYALMARAAGIRMSECRLFEENGRRHFMTRRFDRAENGGKLHMQSLCALAHFDFNQAGAYAYEQALL 299          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54733.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1V0B800_9PSED1.060e-9079.31Toxin HipA n=3 Tax=Pseudomonas TaxID=286 RepID=A0A... [more]
A0A2A2Q9G3_9BACT1.290e-9079.89Toxin HipA n=1 Tax=Opitutae bacterium Tous-C1TDCM ... [more]
A0A849XYQ5_9BACT2.910e-9081.61Type II toxin-antitoxin system HipA family toxin n... [more]
A0A2U8E683_9BACT6.010e-9079.07Toxin HipA n=1 Tax=Ereboglobus luteus TaxID=179692... [more]
UPI0019C87CB98.880e-9077.46Type II toxin-antitoxin system HipA family toxin n... [more]
A0A3B0YS53_9ZZZZ9.990e-9077.71Toxin HigB / Protein kinase domain of HipA (Fragme... [more]
A0A6N4WSB9_9BACT1.650e-8978.61HIPA PROTEIN n=2 Tax=Lentimonas TaxID=417293 RepID... [more]
A0A7V2JI42_9BACT9.400e-8977.14Type II toxin-antitoxin system HipA family toxin n... [more]
A0A2N1XJZ9_9GAMM1.370e-8878.03Toxin HipA n=2 Tax=unclassified Gammaproteobacteri... [more]
W0IU14_9BACT2.990e-8882.35Toxin HipA n=2 Tax=unclassified Opitutaceae TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig54733contigP-wetherbeei_contig54733:2..529 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog794903.OPIT5_04415
PFAMsCouple_hipA,HipA_C
Model size528
Max annot lvl414999|Opitutae
KEGG koko:K07154
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.91e-89
EggNOG OGsCOG3550@1|root,COG3550@2|Bacteria,46XT4@74201|Verrucomicrobia,3K8Y8@414999|Opitutae
EC2.7.11.1
DescriptionPfam:HipA_N
Cds size528
COG categoryS
BRITEko00000,ko01000,ko01001,ko02048
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186817.1728113-CDS-P-wetherbeei_contig54733:1..5291683186817.1728113-CDS-P-wetherbeei_contig54733:1..529Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig54733 2..529 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig54733.1.1prot_P-wetherbeei_contig54733.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig54733 2..529 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig54733.1.1

>prot_P-wetherbeei_contig54733.1.1 ID=prot_P-wetherbeei_contig54733.1.1|Name=mRNA_P-wetherbeei_contig54733.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=176bp
KSRTASKISVDALVQLASEVLTHRNELQTSFTGAARKKALNDILMVGTSA
GGARAKAVIAWHPHTNEVRSGQIAAGDGFEYWLLKFDGVSGNQDKELEDP
QGYGAIEYAYHLMAQAAGITMSECRLLEEHGRRHFMTRRFDRLPGGAKLH
MQSLCALAHFDFNQAGAYAYEQALLS
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mRNA from alignment at P-wetherbeei_contig54733:2..529-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig54733.1.1 ID=mRNA_P-wetherbeei_contig54733.1.1|Name=mRNA_P-wetherbeei_contig54733.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig54733:2..529- (Phaeothamnion wetherbeei SAG_119_79)
AAGTCACGCACGGCAAGCAAGATCAGCGTCGATGCCCTGGTGCAGCTTGC CTCCGAGGTACTCACCCATCGCAACGAGTTACAGACCAGCTTCACGGGTG CTGCGCGGAAAAAGGCCCTGAACGACATCTTGATGGTCGGCACCTCGGCC GGTGGCGCGCGCGCCAAGGCGGTGATTGCCTGGCATCCACACACCAACGA AGTGCGCTCCGGCCAGATAGCTGCAGGCGACGGCTTTGAGTATTGGCTGC TGAAATTCGACGGCGTATCCGGCAACCAGGACAAAGAACTCGAAGACCCT CAGGGCTACGGCGCGATCGAGTATGCCTATCACCTGATGGCCCAGGCGGC CGGCATCACCATGAGTGAATGCCGCTTGCTGGAAGAACATGGGCGGCGCC ACTTCATGACGCGCCGCTTCGACCGCCTGCCAGGTGGAGCGAAGCTGCAC ATGCAGTCGCTGTGCGCACTGGCCCATTTCGATTTCAATCAGGCTGGCGC CTACGCCTACGAACAGGCGTTGCTCAGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig54733:2..529-

>mRNA_P-wetherbeei_contig54733.1.1 ID=mRNA_P-wetherbeei_contig54733.1.1|Name=mRNA_P-wetherbeei_contig54733.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig54733:2..529- (Phaeothamnion wetherbeei SAG_119_79)
AAGTCACGCACGGCAAGCAAGATCAGCGTCGATGCCCTGGTGCAGCTTGC
CTCCGAGGTACTCACCCATCGCAACGAGTTACAGACCAGCTTCACGGGTG
CTGCGCGGAAAAAGGCCCTGAACGACATCTTGATGGTCGGCACCTCGGCC
GGTGGCGCGCGCGCCAAGGCGGTGATTGCCTGGCATCCACACACCAACGA
AGTGCGCTCCGGCCAGATAGCTGCAGGCGACGGCTTTGAGTATTGGCTGC
TGAAATTCGACGGCGTATCCGGCAACCAGGACAAAGAACTCGAAGACCCT
CAGGGCTACGGCGCGATCGAGTATGCCTATCACCTGATGGCCCAGGCGGC
CGGCATCACCATGAGTGAATGCCGCTTGCTGGAAGAACATGGGCGGCGCC
ACTTCATGACGCGCCGCTTCGACCGCCTGCCAGGTGGAGCGAAGCTGCAC
ATGCAGTCGCTGTGCGCACTGGCCCATTTCGATTTCAATCAGGCTGGCGC
CTACGCCTACGAACAGGCGTTGCTCAGC
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