mRNA_P-wetherbeei_contig54711.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54711.1.1 vs. uniprot
Match: A0A7X3SRL9_9HYPH (Sulfur oxidation c-type cytochrome SoxX n=1 Tax=Microvirga makkahensis TaxID=1128670 RepID=A0A7X3SRL9_9HYPH) HSP 1 Score: 58.9 bits (141), Expect = 3.920e-9 Identity = 30/52 (57.69%), Postives = 38/52 (73.08%), Query Frame = 1
Query: 34 AAPALAQEMRPYRVEGNAIPEPLAPA-GDAARGRAMLVARDPANCILCHAAP 186
A PA AQE+RP+ + G+AIPEPL GDAARGRA++V R C+LCH+ P
Sbjct: 43 AGPAHAQELRPFTIVGDAIPEPLTGIKGDAARGRAIVVDRRKGLCLLCHSGP 94
BLAST of mRNA_P-wetherbeei_contig54711.1.1 vs. uniprot
Match: UPI001B110559 (Sulfur oxidation c-type cytochrome SoxX n=1 Tax=Rhodospirillales bacterium TMPK1 TaxID=2812848 RepID=UPI001B110559) HSP 1 Score: 56.2 bits (134), Expect = 2.190e-8 Identity = 29/53 (54.72%), Postives = 39/53 (73.58%), Query Frame = 1
Query: 31 LAAPALAQEMRPYRVEGNAIPEPLAPA-GDAARGRAMLVARDPANCILCHAAP 186
L + A AQE+RPY++ G+AIP+ L A GDAARGRA++V R C+LCH+ P
Sbjct: 6 LVSSANAQELRPYQIVGDAIPQSLTGAKGDAARGRAIVVNRQVGLCLLCHSGP 58
BLAST of mRNA_P-wetherbeei_contig54711.1.1 vs. uniprot
Match: UPI001FE01E01 (sulfur oxidation c-type cytochrome SoxX n=2 Tax=Bradyrhizobium TaxID=374 RepID=UPI001FE01E01) HSP 1 Score: 54.3 bits (129), Expect = 1.480e-7 Identity = 28/51 (54.90%), Postives = 36/51 (70.59%), Query Frame = 1
Query: 37 APALAQEMRPYRVEGNAIPEPLAPA-GDAARGRAMLVARDPANCILCHAAP 186
APA A+E+RPY V G+AIP+PL GD RGR ++V R + CILCH+ P
Sbjct: 19 APAGAEELRPYTVVGDAIPQPLTGTKGDVVRGRTLIVERS-STCILCHSGP 68
BLAST of mRNA_P-wetherbeei_contig54711.1.1 vs. uniprot
Match: A0A0A3Y184_BRAJP (Cytochrome C n=13 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A0A3Y184_BRAJP) HSP 1 Score: 53.9 bits (128), Expect = 2.120e-7 Identity = 31/55 (56.36%), Postives = 37/55 (67.27%), Query Frame = 1
Query: 25 LMLAAPALAQEMRPYRVEGNAIPEPLAPA-GDAARGRAMLVARDPANCILCHAAP 186
L LA A A E+ PYR+ G+ IPEPL GD ARGRA++VAR CILCH+ P
Sbjct: 16 LALACGARADELVPYRIIGDTIPEPLTGTPGDPARGRALVVART-TTCILCHSGP 69
BLAST of mRNA_P-wetherbeei_contig54711.1.1 vs. uniprot
Match: UPI001EE1822B (sulfur oxidation c-type cytochrome SoxX n=1 Tax=Methylorubrum podarium TaxID=200476 RepID=UPI001EE1822B) HSP 1 Score: 53.9 bits (128), Expect = 2.260e-7 Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = 1
Query: 7 RIICVVLMLAAPALAQE--MRPYRVEGNAIPEPLAPA-GDAARGRAMLVARDPANCILCHAAP 186
R++ +VL LA A E + PYR+ G+AIPEPL A GDA RGRA++ R C+LCHA P
Sbjct: 6 RLVPIVLALAVTAARAEESLVPYRIVGDAIPEPLTGAPGDAGRGRAIVADRSRGLCLLCHAGP 68
BLAST of mRNA_P-wetherbeei_contig54711.1.1 vs. uniprot
Match: A0A431QZ11_9BRAD (Sulfur oxidation c-type cytochrome SoxX n=6 Tax=Proteobacteria TaxID=1224 RepID=A0A431QZ11_9BRAD) HSP 1 Score: 53.5 bits (127), Expect = 2.420e-7 Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 1
Query: 31 LAAPALAQEMRPYRVEGNAIPEPLA-PAGDAARGRAMLVARDPANCILCHAAP 186
L A A+AQE++PY + G+ IPE L GDAARGRA+++ R + CILCH+ P
Sbjct: 6 LPAAAVAQELKPYTIVGDGIPESLTGQPGDAARGRALVLTRS-STCILCHSGP 57
BLAST of mRNA_P-wetherbeei_contig54711.1.1 vs. uniprot
Match: UPI001B89D9B6 (sulfur oxidation c-type cytochrome SoxX n=2 Tax=Bradyrhizobium diazoefficiens TaxID=1355477 RepID=UPI001B89D9B6) HSP 1 Score: 53.5 bits (127), Expect = 4.970e-7 Identity = 31/60 (51.67%), Postives = 42/60 (70.00%), Query Frame = 1
Query: 10 IICVVLMLAAPALAQEMRPYRVEGNAIPEPLAP-AGDAARGRAMLVARDPANCILCHAAP 186
+I + L LA+ A AQE+ PY + G +IP+ L AGDAARGRA+++AR CILCH+ P
Sbjct: 47 VITIGLALASGARAQELVPYNIVGESIPDSLTGGAGDAARGRALVLART-TTCILCHSGP 105
BLAST of mRNA_P-wetherbeei_contig54711.1.1 vs. uniprot
Match: UPI0017D495DE (Sulfur oxidation c-type cytochrome SoxX n=1 Tax=Bradyrhizobium sp. TaxID=376 RepID=UPI0017D495DE) HSP 1 Score: 52.8 bits (125), Expect = 5.890e-7 Identity = 27/52 (51.92%), Postives = 37/52 (71.15%), Query Frame = 1
Query: 34 AAPALAQEMRPYRVEGNAIPEPLAPA-GDAARGRAMLVARDPANCILCHAAP 186
A A A+++ PY++ GN IP PL + GDAARGRA+++AR CILCH+ P
Sbjct: 19 ACGASAEDLSPYKIVGNGIPTPLTGSPGDAARGRALVLART-TTCILCHSGP 69
BLAST of mRNA_P-wetherbeei_contig54711.1.1 vs. uniprot
Match: A0A176YE40_9BRAD (Sulfur oxidation c-type cytochrome SoxX n=1 Tax=Bradyrhizobium centrolobii TaxID=1505087 RepID=A0A176YE40_9BRAD) HSP 1 Score: 52.8 bits (125), Expect = 5.990e-7 Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 1
Query: 34 AAPALAQEMRPYRVEGNAIPEPLAPA-GDAARGRAMLVARDPANCILCHAAP 186
AA A A+E PY++ G+ IPE L A GDAARGRA+++AR CILCH+ P
Sbjct: 20 AAGATAEEPAPYKIVGDGIPESLTGAPGDAARGRALVLARG-TTCILCHSGP 70
BLAST of mRNA_P-wetherbeei_contig54711.1.1 vs. uniprot
Match: A0A0R3M5I2_9BRAD (Sulfur oxidation c-type cytochrome SoxX n=2 Tax=Bradyrhizobium TaxID=374 RepID=A0A0R3M5I2_9BRAD) HSP 1 Score: 52.4 bits (124), Expect = 6.540e-7 Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 28 MLAAPALAQ--EMRPYRVEGNAIPEPLA-PAGDAARGRAMLVARDPANCILCHAAP 186
MLA P LA E+R Y V+G+AIP+ L AGDAARGRA++V R + CILCH+ P
Sbjct: 1 MLALPGLAAATELRFYAVDGDAIPQSLTGAAGDAARGRALVVERS-STCILCHSGP 55 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54711.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54711.1.1 >prot_P-wetherbeei_contig54711.1.1 ID=prot_P-wetherbeei_contig54711.1.1|Name=mRNA_P-wetherbeei_contig54711.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=64bp MLRIICVVLMLAAPALAQEMRPYRVEGNAIPEPLAPAGDAARGRAMLVARback to top mRNA from alignment at P-wetherbeei_contig54711:312..503+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54711.1.1 ID=mRNA_P-wetherbeei_contig54711.1.1|Name=mRNA_P-wetherbeei_contig54711.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=192bp|location=Sequence derived from alignment at P-wetherbeei_contig54711:312..503+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54711:312..503+ >mRNA_P-wetherbeei_contig54711.1.1 ID=mRNA_P-wetherbeei_contig54711.1.1|Name=mRNA_P-wetherbeei_contig54711.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=192bp|location=Sequence derived from alignment at P-wetherbeei_contig54711:312..503+ (Phaeothamnion wetherbeei SAG_119_79)back to top |