mRNA_P-wetherbeei_contig54694.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig54694.1.1
Unique NamemRNA_P-wetherbeei_contig54694.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig54694.1.1 vs. uniprot
Match: A0A7L9BB52_9BACT (DUF4252 domain-containing protein n=1 Tax=Flammeovirgaceae bacterium TaxID=2026740 RepID=A0A7L9BB52_9BACT)

HSP 1 Score: 152 bits (384), Expect = 8.490e-45
Identity = 74/110 (67.27%), Postives = 93/110 (84.55%), Query Frame = 1
Query:   22 MKKIIIILALIAVGTGAFAQGEAVTKFFDKYAGDESFTTQATISSKMFSLFTNMDATTAEDKEVIEAISKLKGLRILGKDKTNGARTYYTEALAVVGKNKYDELMSVRDK 351
            MKK+II++ L+A+GTG +AQGEA+ KFF+KYA D+SFTTQ TIS KMFSLFT+M+A T EDKEV++AISKLKGLRI+GKD T+ AR  Y EA  ++  NKY+ELM+VRDK
Sbjct:    1 MKKVIIVVTLVALGTGVYAQGEAIAKFFNKYATDDSFTTQVTISGKMFSLFTDMEAETPEDKEVLDAISKLKGLRIIGKDNTSDARNLYKEAFGIITANKYEELMAVRDK 110          
BLAST of mRNA_P-wetherbeei_contig54694.1.1 vs. uniprot
Match: A0A3B8W6S3_9BACT (Uncharacterized protein n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3B8W6S3_9BACT)

HSP 1 Score: 127 bits (319), Expect = 1.510e-34
Identity = 66/117 (56.41%), Postives = 88/117 (75.21%), Query Frame = 1
Query:    1 SIENNNHMKKIIIILALIAVGTGAFAQGEAVTKFFDKYAGDESFTTQATISSKMFSLFTNMDATTAEDKEVIEAISKLKGLRILGKDKTNGARTYYTEALAVVGKNKYDELMSVRDK 351
            +I+ N  MKKI+I + L+A+   A AQG+A+ KFF+KY  DESFT Q T+SSKMF+LFTNMD    EDKEV++AISKLKGL++L K++   AR  Y EA +++  N+Y+ELM VRDK
Sbjct:   25 TIKKNTDMKKIVIGMMLLALSVAAQAQGDAIAKFFNKYQNDESFT-QVTVSSKMFNLFTNMDVEKPEDKEVLDAISKLKGLKVLVKEEARNARELYKEAYSMIPANQYEELMFVRDK 140          
BLAST of mRNA_P-wetherbeei_contig54694.1.1 vs. uniprot
Match: UPI00191DD461 (DUF4252 domain-containing protein n=1 Tax=Chryseolinea sp. Jin1 TaxID=2801331 RepID=UPI00191DD461)

HSP 1 Score: 124 bits (311), Expect = 1.040e-33
Identity = 68/110 (61.82%), Postives = 82/110 (74.55%), Query Frame = 1
Query:   22 MKKIIIILALIAVGTGAFAQGEAVTKFFDKYAGDESFTTQATISSKMFSLFTNMDATTAEDKEVIEAISKLKGLRILGKDKTNGARTYYTEALAVVGKNKYDELMSVRDK 351
            MKKII ++ ++ V  GAFAQ +A++KFF KY  DESF+ Q T+SSKMFSLFTNMDA T EDKEV+ AISKLKGLRILGK     AR  Y EA  ++    Y+EL+SVRDK
Sbjct:    1 MKKIIAVVIVMVVAQGAFAQ-DAISKFFTKYQSDESFS-QVTVSSKMFSLFTNMDADTPEDKEVLNAISKLKGLRILGKQDARNARELYKEAFTLIPMKDYEELLSVRDK 108          
BLAST of mRNA_P-wetherbeei_contig54694.1.1 vs. uniprot
Match: A0A6N4ELL7_9RHOO (Uncharacterized protein n=1 Tax=Azospira oryzae TaxID=146939 RepID=A0A6N4ELL7_9RHOO)

HSP 1 Score: 123 bits (308), Expect = 4.120e-33
Identity = 64/110 (58.18%), Postives = 84/110 (76.36%), Query Frame = 1
Query:   22 MKKIIIILALIAVGTGAFAQGEAVTKFFDKYAGDESFTTQATISSKMFSLFTNMDATTAEDKEVIEAISKLKGLRILGKDKTNGARTYYTEALAVVGKNKYDELMSVRDK 351
            MKK+++   ++     A AQG+A++KFF+KY  DESF+ Q  ISSKMFSLFTNM+    EDKEV++AISKLKGLRILGK+ T+ AR  Y EA A++ K +++ELMSVRDK
Sbjct:    3 MKKLMMSAVMVVFAIAAHAQGDAISKFFNKYNDDESFS-QVNISSKMFSLFTNMEVEKPEDKEVLKAISKLKGLRILGKENTSDARALYKEAFALIPKTEFEELMSVRDK 111          
BLAST of mRNA_P-wetherbeei_contig54694.1.1 vs. uniprot
Match: A0A364XZP5_9BACT (DUF4252 domain-containing protein n=1 Tax=Chryseolinea flava TaxID=2059302 RepID=A0A364XZP5_9BACT)

HSP 1 Score: 122 bits (305), Expect = 6.920e-33
Identity = 67/110 (60.91%), Postives = 85/110 (77.27%), Query Frame = 1
Query:   22 MKKIIIILALIAVGTGAFAQGEAVTKFFDKYAGDESFTTQATISSKMFSLFTNMDATTAEDKEVIEAISKLKGLRILGKDKTNGARTYYTEALAVVGKNKYDELMSVRDK 351
            MKKI+++  L+ V TG  AQ +A++KFF KY  DESFT Q TISSKMF LFTNM+A T EDKEV++AISKLKGLRIL K+ T+ AR  Y EA A++   +++ELM+VRDK
Sbjct:    1 MKKIVVVAMLMIVTTGLQAQ-DAISKFFTKYQADESFT-QVTISSKMFGLFTNMEADTKEDKEVLDAISKLKGLRILVKENTSDARALYKEAFALIPMKEFEELMAVRDK 108          
BLAST of mRNA_P-wetherbeei_contig54694.1.1 vs. uniprot
Match: A0A2W4QW31_9BACT (DUF4252 domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A2W4QW31_9BACT)

HSP 1 Score: 121 bits (303), Expect = 2.280e-32
Identity = 62/104 (59.62%), Postives = 78/104 (75.00%), Query Frame = 1
Query:   37 IILALIAVGTGAFAQGEAVTKFFDKYAGDESFTTQATISSKMFSLFTNMDATTAEDKEVIEAISKLKGLRILGKDKTNGARTYYTEALAVVGKNKYDELMSVRD 348
            + L ++ +     AQ +A+T+FF+KY  DESFT Q T+SSKMF+LFTNMDA T EDKE++EAISKLKGLRIL KD    AR  Y EA +++ KN Y+ELMSVRD
Sbjct:    9 LTLIMLIISVSVQAQNDAITRFFEKYTTDESFT-QVTVSSKMFNLFTNMDAETPEDKELLEAISKLKGLRILAKDNARNARDLYREAFSLIPKNDYEELMSVRD 111          
BLAST of mRNA_P-wetherbeei_contig54694.1.1 vs. uniprot
Match: A0A1M5N5C0_9BACT (Uncharacterized protein n=2 Tax=Chryseolinea TaxID=1433993 RepID=A0A1M5N5C0_9BACT)

HSP 1 Score: 120 bits (301), Expect = 3.580e-32
Identity = 66/110 (60.00%), Postives = 80/110 (72.73%), Query Frame = 1
Query:   22 MKKIIIILALIAVGTGAFAQGEAVTKFFDKYAGDESFTTQATISSKMFSLFTNMDATTAEDKEVIEAISKLKGLRILGKDKTNGARTYYTEALAVVGKNKYDELMSVRDK 351
            MKKII  + L+ V TG FAQ +A++KFF KY  DESF+ Q T+SSKMF LFTNM+A T EDKEV+ AISKLKGLRIL K+    AR  Y EA  ++    Y+EL+SVRDK
Sbjct:    1 MKKIIAAVVLMLVATGGFAQ-DAISKFFSKYQADESFS-QVTVSSKMFGLFTNMEADTPEDKEVLNAISKLKGLRILAKEDARNARELYKEAFTLIPMKDYEELLSVRDK 108          
BLAST of mRNA_P-wetherbeei_contig54694.1.1 vs. uniprot
Match: A0A401UBX9_9BACT (DUF4252 domain-containing protein n=1 Tax=Chryseotalea sanaruensis TaxID=2482724 RepID=A0A401UBX9_9BACT)

HSP 1 Score: 116 bits (290), Expect = 1.360e-30
Identity = 62/110 (56.36%), Postives = 79/110 (71.82%), Query Frame = 1
Query:   22 MKKIIIILALIAVGTGAFAQGEAVTKFFDKYAGDESFTTQATISSKMFSLFTNMDATTAEDKEVIEAISKLKGLRILGKDKTNGARTYYTEALAVVGKNKYDELMSVRDK 351
            MKK+++ L ++A     F Q +A++KFF KY  DESF+   T+SSKMFSLFTNMD  TAEDKEV+EAISK+KGLRIL K+    AR  Y EA  ++    Y+ELM+VRDK
Sbjct:    1 MKKLMLALVMMAGYGITFGQTDAISKFFAKYQNDESFS-NVTVSSKMFSLFTNMDVETAEDKEVVEAISKIKGLRILAKEDARNARDLYKEAFTLIPMKDYEELMTVRDK 109          
BLAST of mRNA_P-wetherbeei_contig54694.1.1 vs. uniprot
Match: A0A3D4ISW2_9BACT (DUF4252 domain-containing protein n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3D4ISW2_9BACT)

HSP 1 Score: 116 bits (290), Expect = 1.470e-30
Identity = 63/110 (57.27%), Postives = 80/110 (72.73%), Query Frame = 1
Query:   22 MKKIIIILALIAVGTGAFAQGEAVTKFFDKYAGDESFTTQATISSKMFSLFTNMDATTAEDKEVIEAISKLKGLRILGKDKTNGARTYYTEALAVVGKNKYDELMSVRDK 351
            MKKII+  A++ V  GAFAQGEAV+ FF KY  D++F+ Q TISSKMF LFTNM+    +D+EV+ AISKLKGL+IL K+    AR  Y EA  ++ K +Y+ELM VRDK
Sbjct:    1 MKKIILFGAMLLVVVGAFAQGEAVSSFFSKYQSDDTFS-QVTISSKMFGLFTNMELEDKDDQEVLNAISKLKGLKILAKEDARNARDLYNEANKMLPKGQYEELMYVRDK 109          
BLAST of mRNA_P-wetherbeei_contig54694.1.1 vs. uniprot
Match: A0A1T5LRS2_9BACT (Uncharacterized protein n=1 Tax=Ohtaekwangia koreensis TaxID=688867 RepID=A0A1T5LRS2_9BACT)

HSP 1 Score: 115 bits (288), Expect = 2.650e-30
Identity = 61/110 (55.45%), Postives = 83/110 (75.45%), Query Frame = 1
Query:   22 MKKIIIILALIAVGTGAFAQGEAVTKFFDKYAGDESFTTQATISSKMFSLFTNMDATTAEDKEVIEAISKLKGLRILGKDKTNGARTYYTEALAVVGKNKYDELMSVRDK 351
            MKKI +I  ++ +  G FAQ +A++KFF KY  DESF+ Q T+SSKMF+LFTNM+  + ED+EV+ AISKLKGLRIL K+ T+ AR  Y EA +++   +++ELMSVRDK
Sbjct:    1 MKKIFVIALMMVIVNGVFAQ-DAISKFFTKYQTDESFS-QVTVSSKMFNLFTNMEVESKEDQEVLNAISKLKGLRILAKENTSDARALYKEAFSLIPTKEFEELMSVRDK 108          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54694.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7L9BB52_9BACT8.490e-4567.27DUF4252 domain-containing protein n=1 Tax=Flammeov... [more]
A0A3B8W6S3_9BACT1.510e-3456.41Uncharacterized protein n=1 Tax=Cytophagales bacte... [more]
UPI00191DD4611.040e-3361.82DUF4252 domain-containing protein n=1 Tax=Chryseol... [more]
A0A6N4ELL7_9RHOO4.120e-3358.18Uncharacterized protein n=1 Tax=Azospira oryzae Ta... [more]
A0A364XZP5_9BACT6.920e-3360.91DUF4252 domain-containing protein n=1 Tax=Chryseol... [more]
A0A2W4QW31_9BACT2.280e-3259.62DUF4252 domain-containing protein n=1 Tax=Bacteroi... [more]
A0A1M5N5C0_9BACT3.580e-3260.00Uncharacterized protein n=2 Tax=Chryseolinea TaxID... [more]
A0A401UBX9_9BACT1.360e-3056.36DUF4252 domain-containing protein n=1 Tax=Chryseot... [more]
A0A3D4ISW2_9BACT1.470e-3057.27DUF4252 domain-containing protein n=1 Tax=Cytophag... [more]
A0A1T5LRS2_9BACT2.650e-3055.45Uncharacterized protein n=1 Tax=Ohtaekwangia koree... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig54694contigP-wetherbeei_contig54694:1..351 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1237149.C900_02644
PFAMsDUF4252
Model size351
Max annot lvl2|Bacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue2.62e-25
EggNOG OGs2CC1H@1|root,33P9C@2|Bacteria
DescriptionDomain of unknown function (DUF4252)
Cds size330
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186816.5305538-CDS-P-wetherbeei_contig54694:0..3301683186816.5305538-CDS-P-wetherbeei_contig54694:0..330Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig54694 1..330 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186816.5396056-UTR-P-wetherbeei_contig54694:330..3511683186816.5396056-UTR-P-wetherbeei_contig54694:330..351Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig54694 331..351 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig54694.1.1prot_P-wetherbeei_contig54694.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig54694 1..330 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig54694.1.1

>prot_P-wetherbeei_contig54694.1.1 ID=prot_P-wetherbeei_contig54694.1.1|Name=mRNA_P-wetherbeei_contig54694.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=110bp
MKKIIIILALIAVGTGAFAQGEAVTKFFDKYAGDESFTTQATISSKMFSL
FTNMDATTAEDKEVIEAISKLKGLRILGKDKTNGARTYYTEALAVVGKNK
YDELMSVRDK
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mRNA from alignment at P-wetherbeei_contig54694:1..351-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig54694.1.1 ID=mRNA_P-wetherbeei_contig54694.1.1|Name=mRNA_P-wetherbeei_contig54694.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=351bp|location=Sequence derived from alignment at P-wetherbeei_contig54694:1..351- (Phaeothamnion wetherbeei SAG_119_79)
AGTATTGAAAACAATAACCATATGAAAAAGATAATTATAATATTGGCATT GATCGCAGTTGGAACTGGAGCATTTGCGCAAGGAGAAGCGGTTACGAAGT TTTTTGATAAGTATGCCGGAGATGAATCTTTCACTACACAGGCAACCATT TCAAGTAAAATGTTCAGCCTTTTTACCAACATGGATGCAACTACTGCGGA AGATAAAGAAGTGATTGAAGCAATTTCTAAACTGAAAGGCCTGCGCATTC TTGGAAAAGATAAGACCAATGGTGCACGCACGTACTACACAGAAGCATTA GCAGTTGTTGGTAAAAACAAGTACGATGAACTGATGTCGGTTCGTGATAA G
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Coding sequence (CDS) from alignment at P-wetherbeei_contig54694:1..351-

>mRNA_P-wetherbeei_contig54694.1.1 ID=mRNA_P-wetherbeei_contig54694.1.1|Name=mRNA_P-wetherbeei_contig54694.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=330bp|location=Sequence derived from alignment at P-wetherbeei_contig54694:1..351- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAAAAGATAATTATAATATTGGCATTGATCGCAGTTGGAACTGGAGC
ATTTGCGCAAGGAGAAGCGGTTACGAAGTTTTTTGATAAGTATGCCGGAG
ATGAATCTTTCACTACACAGGCAACCATTTCAAGTAAAATGTTCAGCCTT
TTTACCAACATGGATGCAACTACTGCGGAAGATAAAGAAGTGATTGAAGC
AATTTCTAAACTGAAAGGCCTGCGCATTCTTGGAAAAGATAAGACCAATG
GTGCACGCACGTACTACACAGAAGCATTAGCAGTTGTTGGTAAAAACAAG
TACGATGAACTGATGTCGGTTCGTGATAAG
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