mRNA_P-wetherbeei_contig54642.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig54642.1.1
Unique NamemRNA_P-wetherbeei_contig54642.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig54642.1.1 vs. uniprot
Match: A0A355F4W0_9BACT (Penicillin acylase (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A355F4W0_9BACT)

HSP 1 Score: 152 bits (383), Expect = 2.020e-43
Identity = 86/176 (48.86%), Postives = 109/176 (61.93%), Query Frame = 1
Query:    1 TLQADSPVDLAYGLGFVHAQDRLFQMEGLRRYAGGELADLFGPGEGEMLVRLDRKIRALGLRQVARRTLGHLPEDQVARLNAYVLGVNAGRRSLAALPFEFSLLKAKPAPWTPEDSLLVILALYLDLQGDNPPLESAVGLVHDLLPAPLAQFLTPTCDPDWDSPLYGDTGTPPDLP 528
            T++ADS VD A  LGF+HAQDR FQM+ LRR + GEL+ LFG     + + +D+  R    R VA R L     D+ A   AY  GVNAG  +L A P+E+ +L+  P PW PED++L + A++LDLQ      ES VGLVHDLLP PLAQFLTP     WD+PL G     P +P
Sbjct:   10 TIRADSRVDGARALGFLHAQDRFFQMDLLRRSSAGELSALFGA----LAIDVDKANRLHRFRHVAGRVLARATPDERAVFEAYAAGVNAGLAALGAKPWEYLVLRTDPQPWVPEDTVLTVYAMFLDLQDGKAGYESDVGLVHDLLPLPLAQFLTPV-GTAWDAPLVGSPLASPPVP 180          
BLAST of mRNA_P-wetherbeei_contig54642.1.1 vs. uniprot
Match: A0A3D0ST39_9GAMM (Penicillin acylase family protein (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D0ST39_9GAMM)

HSP 1 Score: 150 bits (378), Expect = 3.470e-40
Identity = 84/168 (50.00%), Postives = 103/168 (61.31%), Query Frame = 1
Query:    1 TLQADSPVDLAYGLGFVHAQDRLFQMEGLRRYAGGELADLFGPGEGEMLVRLDRKIRALGLRQVARRTLGHLPEDQVARLNAYVLGVNAGRRSLAALPFEFSLLKAKPAPWTPEDSLLVILALYLDLQGDNPPLESAVGLVHDLLPAPLAQFLTPTCDPDWDSPLYGD 504
            T+      D+A   GF+HAQDR FQM+ LRR A GELA+ FGP    M + +DR  R    RQ AR+TL  LP +Q   + AY  GVNAG   L  LPFE+ LL+  P PW  ED+LLV+ A+YLDLQ      ESA GL+HD LP  LA FL P    +WD+PL G+
Sbjct:   67 TIHGHHRQDIARATGFIHAQDRFFQMDLLRRSAAGELAEWFGP----MALEVDRAHRLHRFRQRARQTLAALPAEQQGMIAAYTEGVNAGMADLFQLPFEYQLLRVTPKPWQSEDALLVVYAMYLDLQSQQWQRESARGLLHDQLPPSLAAFLDPA-GTEWDTPLQGE 229          
BLAST of mRNA_P-wetherbeei_contig54642.1.1 vs. uniprot
Match: A0A3E0PQ97_9BACT (Penicillin acylase family protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0PQ97_9BACT)

HSP 1 Score: 152 bits (383), Expect = 2.060e-39
Identity = 83/176 (47.16%), Postives = 111/176 (63.07%), Query Frame = 1
Query:    1 TLQADSPVDLAYGLGFVHAQDRLFQMEGLRRYAGGELADLFGPGEGEMLVRLDRKIRALGLRQVARRTLGHLPEDQVARLNAYVLGVNAGRRSLAALPFEFSLLKAKPAPWTPEDSLLVILALYLDLQGDNPPLESAVGLVHDLLPAPLAQFLTPTCDPDWDSPLYGDTGTPPDLP 528
            T++A++ VDLA+  GFVHAQDR FQM+ LRR + GEL+++ GP      V  DRK+R    R  A++ L    E   A L+AY  GVNAG  SL A PFE+ LL   P PW PEDS LV+ ++YLDLQG++   E A+GL+HD LP  +  FL P    +WD+P+ G+    P +P
Sbjct:  113 TIRAENRVDLAFATGFVHAQDRFFQMDLLRRNSAGELSEIVGPAT----VAADRKVRVHRFRDAAKQVLASADEQDRALLDAYAAGVNAGLASLDAKPFEYYLLGVDPVPWQPEDSALVMFSMYLDLQGNDFRDEVALGLMHDTLPPEMFAFLAPP-GTEWDAPIQGEAFETPAIP 283          
BLAST of mRNA_P-wetherbeei_contig54642.1.1 vs. uniprot
Match: A0A7C6VX83_9GAMM (Penicillin acylase family protein n=1 Tax=Xanthomonadaceae bacterium TaxID=1926873 RepID=A0A7C6VX83_9GAMM)

HSP 1 Score: 149 bits (377), Expect = 1.250e-38
Identity = 87/176 (49.43%), Postives = 109/176 (61.93%), Query Frame = 1
Query:    1 TLQADSPVDLAYGLGFVHAQDRLFQMEGLRRYAGGELADLFGPGEGEMLVRLDRKIRALGLRQVARRTLGHLPEDQVARLNAYVLGVNAGRRSLAALPFEFSLLKAKPAPWTPEDSLLVILALYLDLQGDNPPLESAVGLVHDLLPAPLAQFLTPTCDPDWDSPLYGDTGTPPDLP 528
            T++ ++ +D A   GFVHAQ+R FQM+ LRR A GELA L GP      + LDR  R    R  AR+ +  +P +  A L AYV G NAG  +LA  PFE+ LL+  PAPW PED+LLV+ A+YLDLQG     ESA G++H+ LP  LA FL P    DWD+PL GD    P LP
Sbjct:   66 TIRGETRLDAARATGFVHAQERFFQMDLLRRAAAGELAALVGPAA----LALDRANRVHRFRHRARQIVATMPAEDRAVLAAYVAGANAGLAALATPPFEYLLLRTAPAPWQPEDTLLVVYAMYLDLQGQQWLRESARGVLHERLPPALAAFLDPA-GTDWDAPLQGDPLPSPALP 236          
BLAST of mRNA_P-wetherbeei_contig54642.1.1 vs. uniprot
Match: A0A3D2VQK3_9GAMM (Penicillin acylase family protein (Fragment) n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3D2VQK3_9GAMM)

HSP 1 Score: 142 bits (357), Expect = 2.330e-38
Identity = 86/168 (51.19%), Postives = 102/168 (60.71%), Query Frame = 1
Query:    1 TLQADSPVDLAYGLGFVHAQDRLFQMEGLRRYAGGELADLFGPGEGEMLVRLDRKIRALGLRQVARRTLGHLPEDQVARLNAYVLGVNAGRRSLAALPFEFSLLKAKPAPWTPEDSLLVILALYLDLQGDNPPLESAVGLVHDLLPAPLAQFLTPTCDPDWDSPLYGD 504
            T++  S +D+A   GFVHAQDR FQM+ LRR A GELA LFGP   E    LDR  R    R  A   L   P +  A L AYV GVNAG   L+A  FE+  L+  P PW  ED+LLV+ A+YLDLQG     ESA G++HD LPA LA FL P    DWD+PL G+
Sbjct:   74 TIRGQSRLDVARASGFVHAQDRFFQMDVLRRAAAGELAALFGPTALE----LDRANRLHRFRHRAGLALAAAPAEDRALLAAYVAGVNAGLNGLSAPLFEYLPLRIAPEPWQAEDTLLVVYAMYLDLQGRQWSRESARGVLHDRLPAELAAFLDPP-GTDWDAPLQGE 236          
BLAST of mRNA_P-wetherbeei_contig54642.1.1 vs. uniprot
Match: A0A846T1C9_9CYAN (Penicillin acylase family protein n=1 Tax=Synechococcaceae cyanobacterium SM1_2_3 TaxID=2720456 RepID=A0A846T1C9_9CYAN)

HSP 1 Score: 146 bits (369), Expect = 1.280e-37
Identity = 82/167 (49.10%), Postives = 106/167 (63.47%), Query Frame = 1
Query:    1 TLQADSPVDLAYGLGFVHAQDRLFQMEGLRRYAGGELADLFGPGEGEMLVRLDRKIRALGLRQVARRTLGHLPEDQVARLNAYVLGVNAGRRSLAALPFEFSLLKAKPAPWTPEDSLLVILALYLDLQGDNPPLESAVGLVHDLLPAPLAQFLTPTCDPDWDSPLYG 501
            TL+  + +D+A   GF+HAQ+R FQM+ LRR A GELA+LFG    E    LDR  R    R  A +TL  LPE + A + AY  GVN G  +L+A PFE+ LL++ P PW  ED+LL + A+YL LQ +  P ESAVGL+H+ LP  LA FL P    +WD+PL G
Sbjct:   71 TLRGQTRLDVARATGFIHAQERFFQMDLLRRSAAGELAELFGAAALE----LDRSHRLHRFRFRAAQTLATLPEQEWALIAAYAAGVNTGLAALSAPPFEYLLLRSTPTPWRSEDTLLAVYAMYLTLQSEQWPRESAVGLLHERLPPALAAFLNPP-GTEWDAPLQG 232          
BLAST of mRNA_P-wetherbeei_contig54642.1.1 vs. uniprot
Match: A0A3S0W141_9GAMM (Penicillin acylase family protein n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3S0W141_9GAMM)

HSP 1 Score: 143 bits (361), Expect = 1.880e-36
Identity = 83/167 (49.70%), Postives = 101/167 (60.48%), Query Frame = 1
Query:    1 TLQADSPVDLAYGLGFVHAQDRLFQMEGLRRYAGGELADLFGPGEGEMLVRLDRKIRALGLRQVARRTLGHLPEDQVARLNAYVLGVNAGRRSLAALPFEFSLLKAKPAPWTPEDSLLVILALYLDLQGDNPPLESAVGLVHDLLPAPLAQFLTPTCDPDWDSPLYG 501
            TL+    +D+A   GFVHAQ+R FQM+ LRR A GELA LFGP      + LDR  R    RQ A   L  +P+   A + AY  GVN G  +LA  PFE+ LL+  P PW  ED+LL I A+YLDLQG    LESA G++HD LP  LA FL P    +WD+PL G
Sbjct:   71 TLRGMDRLDIARATGFVHAQERFFQMDLLRRTAAGELAALFGPAA----LPLDRNHRLHRFRQRAGLALAAIPDADRALIAAYTAGVNTGLAALATSPFEYLLLRTAPEPWRSEDTLLTIYAMYLDLQGQQWALESARGVLHDTLPPALATFLDPV-GTEWDAPLLG 232          
BLAST of mRNA_P-wetherbeei_contig54642.1.1 vs. uniprot
Match: A0A7Y4TGF8_9BACT (Penicillin acylase family protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7Y4TGF8_9BACT)

HSP 1 Score: 142 bits (358), Expect = 4.950e-36
Identity = 79/176 (44.89%), Postives = 111/176 (63.07%), Query Frame = 1
Query:    1 TLQADSPVDLAYGLGFVHAQDRLFQMEGLRRYAGGELADLFGPGEGEMLVRLDRKIRALGLRQVARRTLGHLPEDQVARLNAYVLGVNAGRRSLAALPFEFSLLKAKPAPWTPEDSLLVILALYLDLQGDNPPLESAVGLVHDLLPAPLAQFLTPTCDPDWDSPLYGDTGTPPDLP 528
            T+   +  D+A   G++HAQDR FQM+  RR A GEL+ + GP      + +DR IR    R VA R +  L  +  A L AYV GVNAG ++L + PFE+ LL+ +PAPWT EDSLLV+L++++ LQ D+   ES++G +HDLLP  +A FL P    +WD+P+ GD    P +P
Sbjct:   62 TIAGATRQDVARATGWLHAQDRFFQMDLARRRAAGELSAVVGPAA----LAIDRDIRIHRFRSVAARAVSLLAAEDAAVLAAYVGGVNAGLQALTSPPFEYRLLRQRPAPWTAEDSLLVVLSMFVTLQDDDGTYESSLGTMHDLLPQVVAAFLAPA-GTEWDAPISGDAFAVPPIP 232          
BLAST of mRNA_P-wetherbeei_contig54642.1.1 vs. uniprot
Match: A0A560ESQ1_9PROT (Acyl-homoserine lactone acylase PvdQ n=1 Tax=Nitrospirillum amazonense TaxID=28077 RepID=A0A560ESQ1_9PROT)

HSP 1 Score: 142 bits (358), Expect = 5.380e-36
Identity = 79/176 (44.89%), Postives = 104/176 (59.09%), Query Frame = 1
Query:    1 TLQADSPVDLAYGLGFVHAQDRLFQMEGLRRYAGGELADLFGPGEGEMLVRLDRKIRALGLRQVARRTLGHLPEDQVARLNAYVLGVNAGRRSLAALPFEFSLLKAKPAPWTPEDSLLVILALYLDLQGDNPPLESAVGLVHDLLPAPLAQFLTPTCDPDWDSPLYGDTGTPPDLP 528
            ++ A++ VD AY LGF+HAQ+R FQM+  R  A GELA+LFG G    ++ +DR  R    R +A R LG LP +Q   ++AY LGVN G R L A PFE+ LL   P PW  ED+LL +  +YL LQ      + +   ++D LP  +A FL PT   DWD+PL G     P LP
Sbjct:   70 SIWAENRVDAAYALGFLHAQERYFQMDLGRHAAAGELAELFGAG----ILPIDRDFRRHRFRALATRVLGELPVEQRELVHAYTLGVNEGLRRLGAPPFEYGLLALSPQPWREEDTLLSVFYMYLLLQDSKADQDYSRAALYDALPRQVADFLAPTGSHDWDAPLVGPVADDPPLP 241          
BLAST of mRNA_P-wetherbeei_contig54642.1.1 vs. uniprot
Match: A0A7Y4SSF0_9BACT (Penicillin acylase family protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7Y4SSF0_9BACT)

HSP 1 Score: 141 bits (356), Expect = 9.010e-36
Identity = 77/168 (45.83%), Postives = 108/168 (64.29%), Query Frame = 1
Query:    1 TLQADSPVDLAYGLGFVHAQDRLFQMEGLRRYAGGELADLFGPGEGEMLVRLDRKIRALGLRQVARRTLGHLPEDQVARLNAYVLGVNAGRRSLAALPFEFSLLKAKPAPWTPEDSLLVILALYLDLQGDNPPLESAVGLVHDLLPAPLAQFLTPTCDPDWDSPLYGD 504
            T++  +  D+A   GF+HAQDR FQM+  RR A GELA L G       + +DR++R    R VARR L        A LNAY  GVNAG  +++A  FE+ +L+  PAPWTPEDSLLV+L++++ LQ ++   ESA+G +H++LPAP+  FL P    +WD+PL G+
Sbjct:   74 TIRGRNREDVARATGFLHAQDRYFQMDLARRRAAGELAALVGA----RALPVDREVRIHRFRAVARRALSLFSSQDAALLNAYTAGVNAGLAAMSAPSFEYLVLRQTPAPWTPEDSLLVVLSMFVTLQENDGDYESALGTMHEVLPAPMYGFLAPQGS-EWDAPLVGE 236          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54642.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A355F4W0_9BACT2.020e-4348.86Penicillin acylase (Fragment) n=1 Tax=Acidobacteri... [more]
A0A3D0ST39_9GAMM3.470e-4050.00Penicillin acylase family protein (Fragment) n=1 T... [more]
A0A3E0PQ97_9BACT2.060e-3947.16Penicillin acylase family protein n=1 Tax=Planctom... [more]
A0A7C6VX83_9GAMM1.250e-3849.43Penicillin acylase family protein n=1 Tax=Xanthomo... [more]
A0A3D2VQK3_9GAMM2.330e-3851.19Penicillin acylase family protein (Fragment) n=1 T... [more]
A0A846T1C9_9CYAN1.280e-3749.10Penicillin acylase family protein n=1 Tax=Synechoc... [more]
A0A3S0W141_9GAMM1.880e-3649.70Penicillin acylase family protein n=1 Tax=Candidat... [more]
A0A7Y4TGF8_9BACT4.950e-3644.89Penicillin acylase family protein n=1 Tax=Acidobac... [more]
A0A560ESQ1_9PROT5.380e-3644.89Acyl-homoserine lactone acylase PvdQ n=1 Tax=Nitro... [more]
A0A7Y4SSF0_9BACT9.010e-3645.83Penicillin acylase family protein n=1 Tax=Acidobac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig54642contigP-wetherbeei_contig54642:2..529 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1121127.JAFA01000025_gene2771
PFAMsPenicil_amidase
Model size528
Max annot lvl28216|Betaproteobacteria
KEGG rclassRC00166,RC00328
KEGG koko:K01434
KEGG ReactionR02170
KEGG Pathwayko00311,ko01130,map00311,map01130
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.46e-33
EggNOG OGsCOG2366@1|root,COG2366@2|Bacteria,1MVMH@1224|Proteobacteria,2VIWI@28216|Betaproteobacteria,1K590@119060|Burkholderiaceae
EC3.5.1.11
Descriptionpenicillin amidase
Cds size528
COG categoryS
BRITEko00000,ko00001,ko01000,ko01002
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186816.1440911-CDS-P-wetherbeei_contig54642:1..5291683186816.1440911-CDS-P-wetherbeei_contig54642:1..529Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig54642 2..529 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig54642.1.1prot_P-wetherbeei_contig54642.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig54642 2..529 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig54642.1.1

>prot_P-wetherbeei_contig54642.1.1 ID=prot_P-wetherbeei_contig54642.1.1|Name=mRNA_P-wetherbeei_contig54642.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=176bp
TLQADSPVDLAYGLGFVHAQDRLFQMEGLRRYAGGELADLFGPGEGEMLV
RLDRKIRALGLRQVARRTLGHLPEDQVARLNAYVLGVNAGRRSLAALPFE
FSLLKAKPAPWTPEDSLLVILALYLDLQGDNPPLESAVGLVHDLLPAPLA
QFLTPTCDPDWDSPLYGDTGTPPDLP
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mRNA from alignment at P-wetherbeei_contig54642:2..529+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig54642.1.1 ID=mRNA_P-wetherbeei_contig54642.1.1|Name=mRNA_P-wetherbeei_contig54642.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig54642:2..529+ (Phaeothamnion wetherbeei SAG_119_79)
ACCCTTCAGGCAGACTCGCCGGTTGACCTGGCTTATGGACTCGGATTCGT CCATGCGCAGGATCGTCTTTTTCAGATGGAAGGGCTCCGCCGATACGCGG GGGGCGAGTTAGCCGACCTGTTCGGCCCCGGCGAGGGCGAGATGCTGGTC AGGCTCGATCGCAAGATCCGGGCGCTCGGCCTGCGCCAGGTCGCCCGGCG GACACTCGGGCATCTACCCGAGGATCAGGTCGCCCGGCTGAATGCGTACG TCCTGGGCGTGAACGCAGGTCGCAGGTCGCTGGCCGCGCTCCCGTTCGAG TTCTCGCTCCTCAAGGCGAAACCCGCCCCCTGGACGCCGGAAGACTCGCT GCTGGTTATCCTGGCGCTCTATCTCGACTTGCAGGGGGACAACCCGCCGC TGGAGTCGGCCGTAGGGCTGGTCCACGACCTTCTGCCCGCGCCCCTGGCG CAATTCTTGACGCCGACCTGCGACCCCGACTGGGACTCGCCGCTCTATGG CGACACCGGGACACCCCCCGACCTCCCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig54642:2..529+

>mRNA_P-wetherbeei_contig54642.1.1 ID=mRNA_P-wetherbeei_contig54642.1.1|Name=mRNA_P-wetherbeei_contig54642.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig54642:2..529+ (Phaeothamnion wetherbeei SAG_119_79)
ACCCTTCAGGCAGACTCGCCGGTTGACCTGGCTTATGGACTCGGATTCGT
CCATGCGCAGGATCGTCTTTTTCAGATGGAAGGGCTCCGCCGATACGCGG
GGGGCGAGTTAGCCGACCTGTTCGGCCCCGGCGAGGGCGAGATGCTGGTC
AGGCTCGATCGCAAGATCCGGGCGCTCGGCCTGCGCCAGGTCGCCCGGCG
GACACTCGGGCATCTACCCGAGGATCAGGTCGCCCGGCTGAATGCGTACG
TCCTGGGCGTGAACGCAGGTCGCAGGTCGCTGGCCGCGCTCCCGTTCGAG
TTCTCGCTCCTCAAGGCGAAACCCGCCCCCTGGACGCCGGAAGACTCGCT
GCTGGTTATCCTGGCGCTCTATCTCGACTTGCAGGGGGACAACCCGCCGC
TGGAGTCGGCCGTAGGGCTGGTCCACGACCTTCTGCCCGCGCCCCTGGCG
CAATTCTTGACGCCGACCTGCGACCCCGACTGGGACTCGCCGCTCTATGG
CGACACCGGGACACCCCCCGACCTCCCC
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