mRNA_P-wetherbeei_contig54629.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54629.1.1 vs. uniprot
Match: A0A7C4XZ12_9HYPH (PAS domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XZ12_9HYPH) HSP 1 Score: 99.8 bits (247), Expect = 3.380e-23 Identity = 49/87 (56.32%), Postives = 57/87 (65.52%), Query Frame = 1
Query: 1 LIHTPDVVDRFLGSIAPMSQPMWLGSEPLVSLKLESAEIVWPDGRPHSVAERMTHQPPVLEPYASSGRLVRFERRQFRVLDGGRATG 261
L H VDRFLGSI+ P+WLG EP+ + LE E+ WPDGRPHS+ +RM Q P L P GRLVR ERR FRV DGGR+ G
Sbjct: 240 LFHAQPTVDRFLGSISCFRAPLWLGREPISEVVLERVEVSWPDGRPHSLIDRMDRQSPFL-PAERQGRLVRLERRAFRVFDGGRSGG 325
BLAST of mRNA_P-wetherbeei_contig54629.1.1 vs. uniprot
Match: A0A7Y5CW51_HYPSQ (PAS domain-containing protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A7Y5CW51_HYPSQ) HSP 1 Score: 90.5 bits (223), Expect = 1.430e-20 Identity = 42/88 (47.73%), Postives = 58/88 (65.91%), Query Frame = 1
Query: 1 LIHTPDVVDRFLGSIAPMSQPMWLGSEPLVSLKLESAEIVWPDGRPHSVAERMTHQPPVLEPYASSGRLVRFERRQFRVLDGGRATGE 264
L+H + VDRFLGS+A + P W+G E L+ ++ S ++VWPDGRPH + + + Q P L P+ R+VR +RRQFRV DGG A E
Sbjct: 122 LVHMRETVDRFLGSVALVDHPAWIGHEALIKTRILSHDLVWPDGRPHEMIDAVHRQSPFL-PHMKDARIVRADRRQFRVYDGGLAKPE 208
BLAST of mRNA_P-wetherbeei_contig54629.1.1 vs. uniprot
Match: A0A2S5PGH5_HYPSQ (PAS domain-containing protein n=2 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5PGH5_HYPSQ) HSP 1 Score: 86.7 bits (213), Expect = 4.350e-19 Identity = 39/83 (46.99%), Postives = 56/83 (67.47%), Query Frame = 1
Query: 1 LIHTPDVVDRFLGSIAPMSQPMWLGSEPLVSLKLESAEIVWPDGRPHSVAERMTHQPPVLEPYASSGRLVRFERRQFRVLDGG 249
L HT + +DR LG+ ++ W+G+EPL S +L +++WPDG+PH AE + Q P L P+ + R+VRF+RRQFRV DGG
Sbjct: 122 LTHTRETIDRLLGAFVLVNGEPWVGTEPLTSRRLIDQKVIWPDGQPHPSAETLNRQAPFL-PHIRTARIVRFDRRQFRVYDGG 203
BLAST of mRNA_P-wetherbeei_contig54629.1.1 vs. uniprot
Match: UPI00092FE6D3 (PAS domain-containing protein n=1 Tax=Hyphomicrobium sp. CS1BSMeth3 TaxID=1892844 RepID=UPI00092FE6D3) HSP 1 Score: 84.3 bits (207), Expect = 3.130e-18 Identity = 42/85 (49.41%), Postives = 57/85 (67.06%), Query Frame = 1
Query: 1 LIHTPDVVDRFLGSIAPMSQPMWLGSEPLVSLKLESAEIVWPDGRPHSVAERMTHQPPVLEPYA-SSGRLVRFERRQFRVLDGGR 252
LIHT D + R LG+++ + WLG+EPL ++ +++I+WPDGRPH+VAERM PP Y + RLVR RR FRV +GGR
Sbjct: 122 LIHTEDRITRLLGALSTRNHEPWLGTEPLKPGRIVASDIIWPDGRPHAVAERMAPPPPSPFKYDFTRSRLVRSRRRLFRVYEGGR 206
BLAST of mRNA_P-wetherbeei_contig54629.1.1 vs. uniprot
Match: A0A431NS41_9HYPH (PAS domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A431NS41_9HYPH) HSP 1 Score: 82.4 bits (202), Expect = 1.700e-17 Identity = 41/84 (48.81%), Postives = 54/84 (64.29%), Query Frame = 1
Query: 1 LIHTPDVVDRFLGSIAPMSQPMWLGSEPLVSLKLESAEIVWPDGRPHSVAERMTHQPPVLEPYASSGRLVRFERRQFRVLDGGR 252
L+H+ +V+DR +G+ AP S P WLG E L LKL S E++WPDGRP + + PP + + R+VR ERR FRVL GGR
Sbjct: 121 LVHSGNVIDRVIGAAAPKSLPYWLGRERLNRLKLISHELIWPDGRPFAAVAASSEPPPFVRDLGTV-RIVRSERRTFRVLQGGR 203
BLAST of mRNA_P-wetherbeei_contig54629.1.1 vs. uniprot
Match: A0A433B8J9_HYPSQ (PAS domain-containing protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A433B8J9_HYPSQ) HSP 1 Score: 80.9 bits (198), Expect = 1.080e-16 Identity = 40/83 (48.19%), Postives = 52/83 (62.65%), Query Frame = 1
Query: 1 LIHTPDVVDRFLGSIAPMSQPMWLGSEPLVSLKLESAEIVWPDGRPHSVAERMTHQPPVLEPYASSGRLVRFERRQFRVLDGG 249
LIHT DVV+R+LGS+AP+++P WLG PL L +++WPDG S E + Q P P R+VR RRQFRV +GG
Sbjct: 142 LIHTRDVVERYLGSVAPINRPQWLGLVPLPHRSLVRHKLIWPDGAARSEVEDLDRQAPFY-PTVREARIVRSARRQFRVYEGG 223
BLAST of mRNA_P-wetherbeei_contig54629.1.1 vs. uniprot
Match: A0A849TRY8_9HYPH (PAS domain-containing protein n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A849TRY8_9HYPH) HSP 1 Score: 80.5 bits (197), Expect = 1.140e-16 Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = 1
Query: 1 LIHTPDVVDRFLGSIAPMSQPMWLGSEPLVSLKLESAEIVWPDGRPHSVAERMTHQPPVLEPYASSGRLVRFERRQFRVLDGGR 252
L+HT + R LGS+AP + P WLG PL +++ IVWPDGRP S +R P+L + R+VRF RR FRV++GGR
Sbjct: 124 LLHTDATITRVLGSVAPANPPEWLGGAPLGKAHIKAHHIVWPDGRPQSGRDRYREPAPLLS-NLTGARVVRFNRRSFRVVEGGR 206
BLAST of mRNA_P-wetherbeei_contig54629.1.1 vs. uniprot
Match: A0A2S5M8I3_HYPSQ (PAS domain-containing protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5M8I3_HYPSQ) HSP 1 Score: 79.0 bits (193), Expect = 4.060e-16 Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 1
Query: 1 LIHTPDVVDRFLGSIAPMSQPMWLGSEPLVSLKLESAEIVWPDGRPHSVAERMTHQPPVLEPYASSGRLVRFERRQFRVLDGG 249
L+HT D VDRF+G+IAP+ WLG++ L + + S +VWPDGR H++ + ++ Q P + R+VR +RRQFRV DGG
Sbjct: 122 LMHTLDRVDRFVGAIAPLKAYPWLGTQALFGVHIVSHALVWPDGRQHAMIDNISRQGP-FPLHQREARIVRSDRRQFRVYDGG 203
BLAST of mRNA_P-wetherbeei_contig54629.1.1 vs. uniprot
Match: UPI0015E70ADF (PAS domain-containing protein n=1 Tax=Hyphomicrobium methylovorum TaxID=84 RepID=UPI0015E70ADF) HSP 1 Score: 78.6 bits (192), Expect = 5.920e-16 Identity = 39/84 (46.43%), Postives = 50/84 (59.52%), Query Frame = 1
Query: 1 LIHTPDVVDRFLGSIAPMSQPMWLGSEPLVSLKLESAEIVWPDGRPHSV-AERMTHQPPVLEPYASSGRLVRFERRQFRVLDGG 249
L HT ++RFLGS P+ +P WLG PL KL S +VWPDGRP S ++H+ P R+V+ +RRQFRV DGG
Sbjct: 122 LTHTGSSIERFLGSCTPLERPCWLGDVPLTRRKLVSHSVVWPDGRPTSEDLVALSHRQTPFLPTIREARIVKSDRRQFRVYDGG 205
BLAST of mRNA_P-wetherbeei_contig54629.1.1 vs. uniprot
Match: A0A6I0EBW2_HYPSQ (PAS domain-containing protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A6I0EBW2_HYPSQ) HSP 1 Score: 78.2 bits (191), Expect = 8.780e-16 Identity = 42/84 (50.00%), Postives = 54/84 (64.29%), Query Frame = 1
Query: 1 LIHTPDVVDRFLGSIAPMSQPMWLGSEPLVSLKLESAEIVWPDGRPHSVAE-RMTHQPPVLEPYASSGRLVRFERRQFRVLDGG 249
L HT D +DR LG++ P+ P WLG PL S ++ + E+VWP G P V E R+ + PVL P A R+VR ERRQFRV +GG
Sbjct: 124 LRHTGDDIDRVLGALVPLDPPHWLGELPLTSKRIIAHELVWPGGAPTIVDEGRVRNDVPVLLP-ADHARIVRSERRQFRVFEGG 206 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54629.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54629.1.1 >prot_P-wetherbeei_contig54629.1.1 ID=prot_P-wetherbeei_contig54629.1.1|Name=mRNA_P-wetherbeei_contig54629.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=91bp LIHTPDVVDRFLGSIAPMSQPMWLGSEPLVSLKLESAEIVWPDGRPHSVAback to top mRNA from alignment at P-wetherbeei_contig54629:257..529- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54629.1.1 ID=mRNA_P-wetherbeei_contig54629.1.1|Name=mRNA_P-wetherbeei_contig54629.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=273bp|location=Sequence derived from alignment at P-wetherbeei_contig54629:257..529- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54629:257..529- >mRNA_P-wetherbeei_contig54629.1.1 ID=mRNA_P-wetherbeei_contig54629.1.1|Name=mRNA_P-wetherbeei_contig54629.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=273bp|location=Sequence derived from alignment at P-wetherbeei_contig54629:257..529- (Phaeothamnion wetherbeei SAG_119_79)back to top |