mRNA_P-wetherbeei_contig54612.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig54612.1.1
Unique NamemRNA_P-wetherbeei_contig54612.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig54612.1.1 vs. uniprot
Match: D8LCC2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCC2_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 1.900e-43
Identity = 85/170 (50.00%), Postives = 108/170 (63.53%), Query Frame = 1
Query:    4 VVALAASGGVGLWIYNLYITNALISSWGLPLLEPWQALALFTWAANMFAVRQRGRLDGPRARSAAADNAAATSDVRFFTPAGWAFAIWGPIFLGEMLYIVFQCLP----GSAFWLADLAPFFAGAMAAQTLWCFAFRPWAVDSGRLWLPAALLTTGAACLGGAHRVLRAA 501
            ++ +AA G  GL  + L   N L ++W + L++PWQ LA   WA NM A    GRLDG          ++ T  VRF +PAGWAFAIWGPIF GE +Y+ FQ +P      ++WL+D++P+FAGAM  Q LWCF+FRPWA DSG LWLPA LL      LGG HR+LR A
Sbjct:  278 IIVIAALGSGGL--HALTTNNLLRAAWPITLVDPWQVLAASAWALNMRATFGGGRLDG-----IGQSGSSGTRPVRFLSPAGWAFAIWGPIFFGEAIYVAFQLMPLPSIRGSWWLSDISPWFAGAMLFQALWCFSFRPWARDSGLLWLPALLLGGTGVALGGVHRILREA 440          
BLAST of mRNA_P-wetherbeei_contig54612.1.1 vs. uniprot
Match: D7FS55_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS55_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 1.280e-41
Identity = 85/172 (49.42%), Postives = 104/172 (60.47%), Query Frame = 1
Query:    1 TVVALAASGGVGLWIYNLYITNALISSWGLPLLEPWQALALFTWAANMFAVRQRGRLDGPRARSAAADNAAATSDVRFFTPAGWAFAIWGPIFLGEMLYIVFQCLP-----GSAFWLADLAPFFAGAMAAQTLWCFAFRPWAVDSGRLWLPAALLTTGAACLGGAHRVLRAA 501
            T +A+A  GG    +Y    + AL+S W LP ++PWQ L L +WA N  AV   GRLDGP          A    VR+F PAGWAF+IWGPIFLGE    V+Q LP      +A WL+ L+P+ + A   Q+ WC +FR WA DSG LW PAALL   AACLGGAH V+R A
Sbjct:   20 TALAIAGCGG----LYFAAESGALVS-WSLPYVKPWQVLTLTSWAINTAAVSAGGRLDGPEPED---PKDAKLPLVRYFMPAGWAFSIWGPIFLGEAALAVYQTLPLEGVSAAAGWLSKLSPWLSSAFLVQSCWCLSFREWARDSGLLWFPAALLGGTAACLGGAHHVVRGA 183          
BLAST of mRNA_P-wetherbeei_contig54612.1.1 vs. uniprot
Match: A0A835Z9R9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9R9_9STRA)

HSP 1 Score: 148 bits (374), Expect = 6.540e-41
Identity = 82/169 (48.52%), Postives = 104/169 (61.54%), Query Frame = 1
Query:    4 VVALAASGGVGLWIYNLYITNALISSWGLPLLEPWQALALFTWAANMFAVRQRGRLDGPRARSAAADNAAATSDVRFFTPAGWAFAIWGPIFLGEMLYIVFQCLP----GSAFWLADLAPFFAGAMAAQTLWCFAFRPWAVDSGR--LWLPAALLTTGAACLGGAHRVL 492
            V  L A+  +     NL  TNAL + W     EPWQ L   T+  N  AVR  GRLDG +    AA      +  R+F PAGWAFAIW PIF GE+L++++Q LP     +++WLA+L+P+F+GAM  QTLWC AFRPWA  +G    W+PA LL  GAA LGGAH +L
Sbjct:    4 VATLTAAAAIVAGCRNLKATNALTTPWNFRYAEPWQVLNAVTYLLNFAAVRVPGRLDGRQWSQDAA------TQQRYFAPAGWAFAIWAPIFAGELLFVIYQALPLARVRTSWWLAELSPYFSGAMLLQTLWCGAFRPWARAAGLNLQWIPALLLGLGAAALGGAHGIL 166          
BLAST of mRNA_P-wetherbeei_contig54612.1.1 vs. uniprot
Match: A0A7S2UXB1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXB1_9STRA)

HSP 1 Score: 140 bits (353), Expect = 1.090e-37
Identity = 82/151 (54.30%), Postives = 98/151 (64.90%), Query Frame = 1
Query:   49 NLYITNALISSWGLPLLEPWQALALFTWAANMFAVRQRGRLDGPRARSAAADNAAATSDVRFFTPAGWAFAIWGPIFLGEMLYIVFQCLPGSAF---WLADLAPFFAGAMAAQTLWCFAFRPWAVDSGRLWLPAALLTTGAACLGGAHRVL 492
            N  I NA IS W LP   PWQ L +  WA NM+AV   GRLDG +A + + +      ++RFFTPAGWAFAIWGPIFLGE L+  FQ LP       ++  L  ++  A+A Q+LWC AFRPWA  SG LWLPAALLT  A  LGGAH+VL
Sbjct:   42 NEKIVNASIS-W-LPF-RPWQILNILAWALNMWAVSVPGRLDGSQAAALSDEG-----EIRFFTPAGWAFAIWGPIFLGEALFAFFQLLPIETVQTSFIPKLTVWWIPAVACQSLWCSAFRPWAKKSGFLWLPAALLTLTAVALGGAHKVL 184          
BLAST of mRNA_P-wetherbeei_contig54612.1.1 vs. uniprot
Match: A0A7S3UYN9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYN9_HETAK)

HSP 1 Score: 108 bits (271), Expect = 8.210e-27
Identity = 58/106 (54.72%), Postives = 70/106 (66.04%), Query Frame = 1
Query:  100 EPWQALALFTWAANMFAVRQRGRLDGPRARSAAADNAAATSDVRFFTPAGWAFAIWGPIFLGEMLYIVFQCLPGSAF--WLADLAPFFAGAMAAQTLWCFAFRPWA 411
            +PWQ L  F +   M+AV   GR+DG +A  A  D      D+RFFTPAGWAFAIW PIFLGE L+ V+Q LPGSA   +L  L P++  AM  Q+LWC AFRPWA
Sbjct:   88 KPWQLLNFFAFFGQMWAVSLPGRVDGEQA--APKDG----KDIRFFTPAGWAFAIWAPIFLGEALFAVYQALPGSAAKGFLPALTPYWLAAMGFQSLWCAAFRPWA 187          
BLAST of mRNA_P-wetherbeei_contig54612.1.1 vs. uniprot
Match: A0A6V1K7Z9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1K7Z9_HETAK)

HSP 1 Score: 103 bits (257), Expect = 3.470e-23
Identity = 55/133 (41.35%), Postives = 80/133 (60.15%), Query Frame = 1
Query:  106 WQALALFTWAANMFAVRQRGRLDGPRARSAAADNAAATSDVRFFTPAGWAFAIWGPIFLGEMLYIVFQCLPGSAF----WLADLAPFFAGAMAAQTLWCFAFRPWAVDSGRLWLPAALLTTGAACLGGAHRVL 492
            WQ L  F +  N +A ++ GR+D  + R+ A+         RFFTPAGWAF IW PIF+GE +++ +Q LP +      +LA L+PF+  A+  Q++W F  RPWAV++G  W+ AALL      L G H+V+
Sbjct:   98 WQVLNTFIFLFNRWAGKRPGRMDMKQPRAEASQK---KEVARFFTPAGWAFRIWIPIFIGETIFVFYQALPINYIKNKDFLAMLSPFWIAAIGFQSIWTFCARPWAVENGYGWIQAALLVLTGVALSGVHKVM 227          
BLAST of mRNA_P-wetherbeei_contig54612.1.1 vs. uniprot
Match: A0A090N4T8_OSTTA (Unnamed product n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090N4T8_OSTTA)

HSP 1 Score: 98.6 bits (244), Expect = 1.040e-21
Identity = 70/184 (38.04%), Postives = 90/184 (48.91%), Query Frame = 1
Query:   10 ALAASGGVGL---------WIYNLYITNALISSWGLPLLEPWQALALFTWAANMFAVRQRGRLDGPRARSAA----------ADNAAATSDVR-FFTPAGWAFAIWGPIFLGEMLYIVFQCLPGSAFWLADLAPFFAGAMAAQTLWCFAFRPWAVDSGRLWLPAALLTTGAACLGGAHRVLRAA 501
            AL  +G  GL         WI +L   NA+  +      +PW+ +    +  N+ +V   GR+DG   + AA          A      S+ R  FTPAGWAFAIWG I+ GEM       L G    +A  AP++A A   Q+LWC AFRPWA      W+ +ALL T A  LGGA R LR A
Sbjct:   11 ALITAGAAGLVIGVAKIAPWITSL-TANAIAGA------QPWKVVVALAYGVNVASVSAPGRIDGEMQKRAAEAKRAKPEEKAHGVPLDSEFRSLFTPAGWAFAIWGVIYAGEMAMTAHALLGGDER-VAAAAPYWAVACGLQSLWCVAFRPWAKKPRHFWVSSALLITEAFALGGATRALRGA 186          
BLAST of mRNA_P-wetherbeei_contig54612.1.1 vs. uniprot
Match: L1K151_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K151_GUITC)

HSP 1 Score: 95.9 bits (237), Expect = 8.950e-21
Identity = 60/135 (44.44%), Postives = 75/135 (55.56%), Query Frame = 1
Query:   97 LEPWQALALFTWAANMFAVRQRGRLDGPRARSAAADNAAATSDVRFFTPAGWAFAIWGPIFLGEMLYIVFQCLPGS-----AFWLADLAPFFAGAMAAQTLWCFAFRPWAVDSGRLWLPAALLTTGAACLGGAHR 486
            L+ WQ +    +A    A    GRLD    R          +D+RFFTPAG+AFAIW PIFLGEML +    +P S     + WL  +AP +A A  AQ LWC AFRPWA+     W+PA+LLT  A  L  +HR
Sbjct:   29 LQSWQLMISGGYALFFCANLIPGRLDTVLGRPK-------RTDLRFFTPAGFAFAIWAPIFLGEMLMMFSVLMPDSLRSPGSGWLEAMAPSYAAASVAQALWCLAFRPWALKYQ--WIPASLLTIAALALFESHR 154          
BLAST of mRNA_P-wetherbeei_contig54612.1.1 vs. uniprot
Match: A0A7S0WI04_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WI04_9CHLO)

HSP 1 Score: 95.9 bits (237), Expect = 1.710e-20
Identity = 57/136 (41.91%), Postives = 74/136 (54.41%), Query Frame = 1
Query:   97 LEPWQALALFTWAANMFAVRQRGRLDGPRARSAAADNAAATSDV--RFFTPAGWAFAIWGPIFLGEMLYIVFQCLPG--SAFWLADLAPFFAGAMAAQTLWCFAFRPWAVDSGRLWLPAALLTTGAACLGGAHRVL 492
            L  WQ +    +  N++AV   GR+D   A +    N    SD      TP+GWAFAIWG I+L E ++ V Q LP      WL D++P++  A   Q+LWC AFR WA  SG  W+ AALLT  A  L GA  V+
Sbjct:   72 LRVWQVVNAAAFCPNVWAVSSGGRIDSRYANT----NGVPPSDEYRSLVTPSGWAFAIWGVIYLTESIFTVVQLLPSMTDVTWLLDVSPWWVAANIYQSLWCAAFRDWARPSGVFWISAALLTATAIALAGAEAVV 203          
BLAST of mRNA_P-wetherbeei_contig54612.1.1 vs. uniprot
Match: A0A1Y5IB82_OSTTA (Uncharacterized protein n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5IB82_OSTTA)

HSP 1 Score: 97.4 bits (241), Expect = 2.080e-20
Identity = 60/145 (41.38%), Postives = 76/145 (52.41%), Query Frame = 1
Query:  100 EPWQALALFTWAANMFAVRQRGRLDGPRARSAA----------ADNAAATSDVR-FFTPAGWAFAIWGPIFLGEMLYIVFQCLPGSAFWLADLAPFFAGAMAAQTLWCFAFRPWAVDSGRLWLPAALLTTGAACLGGAHRVLRAA 501
            +PW+ +    +  N+ +V   GR+DG   + AA          A      S+ R  FTPAGWAFAIWG I+ GEM       L G    +A  AP++A A   Q+LWC AFRPWA      W+ +ALL T A  LGGA R LR A
Sbjct:  340 QPWKVVVALAYGVNVASVSAPGRIDGEMQKRAAEAKRAKPEEKAHGVPLDSEFRSLFTPAGWAFAIWGVIYAGEMAMTAHALLGGDER-VAAAAPYWAVACGLQSLWCVAFRPWAKKPRHFWVSSALLITEAFALGGATRALRGA 483          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54612.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCC2_ECTSI1.900e-4350.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FS55_ECTSI1.280e-4149.42Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z9R9_9STRA6.540e-4148.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UXB1_9STRA1.090e-3754.30Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3UYN9_HETAK8.210e-2754.72Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6V1K7Z9_HETAK3.470e-2341.35Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A090N4T8_OSTTA1.040e-2138.04Unnamed product n=1 Tax=Ostreococcus tauri TaxID=7... [more]
L1K151_GUITC8.950e-2144.44Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S0WI04_9CHLO1.710e-2041.91Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A1Y5IB82_OSTTA2.080e-2041.38Uncharacterized protein n=1 Tax=Ostreococcus tauri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig54612contigP-wetherbeei_contig54612:1..501 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LCC2
Model size501
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons1
Evalue3.11e-44
EggNOG OGs2CRKW@1|root,2S47J@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-14_005300.1
Cds size501
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186815.8954487-CDS-P-wetherbeei_contig54612:0..5011683186815.8954487-CDS-P-wetherbeei_contig54612:0..501Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig54612 1..501 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig54612.1.1prot_P-wetherbeei_contig54612.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig54612 1..501 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig54612.1.1

>prot_P-wetherbeei_contig54612.1.1 ID=prot_P-wetherbeei_contig54612.1.1|Name=mRNA_P-wetherbeei_contig54612.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=167bp
TVVALAASGGVGLWIYNLYITNALISSWGLPLLEPWQALALFTWAANMFA
VRQRGRLDGPRARSAAADNAAATSDVRFFTPAGWAFAIWGPIFLGEMLYI
VFQCLPGSAFWLADLAPFFAGAMAAQTLWCFAFRPWAVDSGRLWLPAALL
TTGAACLGGAHRVLRAA
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mRNA from alignment at P-wetherbeei_contig54612:1..501-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig54612.1.1 ID=mRNA_P-wetherbeei_contig54612.1.1|Name=mRNA_P-wetherbeei_contig54612.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig54612:1..501- (Phaeothamnion wetherbeei SAG_119_79)
ACGGTGGTCGCCCTCGCGGCCTCCGGCGGCGTGGGACTCTGGATCTACAA CCTGTACATCACAAACGCCCTCATCTCGTCCTGGGGCCTCCCGCTGCTCG AGCCCTGGCAGGCACTGGCGCTCTTCACGTGGGCTGCCAATATGTTCGCC GTGCGCCAGCGTGGCCGCCTCGACGGGCCCCGCGCCCGCAGCGCCGCCGC CGACAATGCCGCCGCCACATCTGACGTCCGGTTCTTCACGCCGGCCGGAT GGGCGTTTGCAATCTGGGGGCCGATCTTCCTTGGGGAGATGCTTTATATC GTGTTTCAGTGCCTGCCGGGGTCGGCGTTCTGGCTGGCGGACCTGGCGCC GTTCTTTGCGGGCGCCATGGCAGCGCAGACGCTGTGGTGCTTCGCGTTCC GGCCATGGGCGGTGGACTCTGGGCGGCTGTGGCTTCCGGCGGCGCTGCTG ACTACGGGAGCAGCATGCCTCGGCGGCGCCCACCGCGTGCTGCGGGCGGC G
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Coding sequence (CDS) from alignment at P-wetherbeei_contig54612:1..501-

>mRNA_P-wetherbeei_contig54612.1.1 ID=mRNA_P-wetherbeei_contig54612.1.1|Name=mRNA_P-wetherbeei_contig54612.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig54612:1..501- (Phaeothamnion wetherbeei SAG_119_79)
ACGGTGGTCGCCCTCGCGGCCTCCGGCGGCGTGGGACTCTGGATCTACAA
CCTGTACATCACAAACGCCCTCATCTCGTCCTGGGGCCTCCCGCTGCTCG
AGCCCTGGCAGGCACTGGCGCTCTTCACGTGGGCTGCCAATATGTTCGCC
GTGCGCCAGCGTGGCCGCCTCGACGGGCCCCGCGCCCGCAGCGCCGCCGC
CGACAATGCCGCCGCCACATCTGACGTCCGGTTCTTCACGCCGGCCGGAT
GGGCGTTTGCAATCTGGGGGCCGATCTTCCTTGGGGAGATGCTTTATATC
GTGTTTCAGTGCCTGCCGGGGTCGGCGTTCTGGCTGGCGGACCTGGCGCC
GTTCTTTGCGGGCGCCATGGCAGCGCAGACGCTGTGGTGCTTCGCGTTCC
GGCCATGGGCGGTGGACTCTGGGCGGCTGTGGCTTCCGGCGGCGCTGCTG
ACTACGGGAGCAGCATGCCTCGGCGGCGCCCACCGCGTGCTGCGGGCGGC
G
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