mRNA_P-wetherbeei_contig5460.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5460.1.2
Unique NamemRNA_P-wetherbeei_contig5460.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5460.1.2 vs. uniprot
Match: D8LIK1_ECTSI (Prostaglandin E synthase 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIK1_ECTSI)

HSP 1 Score: 310 bits (795), Expect = 6.730e-101
Identity = 155/242 (64.05%), Postives = 179/242 (73.97%), Query Frame = 1
Query:   25 DITVYQYKICPFCCKLKSVMDFFDVPYSVVEVNPLTKKEIAFSKDYRKVPIVQMRGDTLTDSPLIIEALLQRLGETSAVPASDLEAFASPEARRWAEWADKQLAVLLFPNITRNFSESYQAFGYVWSVPTFGLADKAANQVLGATAMWAAQGKLKKKYGIDDERAALFAALTKWSAALDGGDGGDGGGQPFAGGDRPHLGDVAVFGCIHAIHGLDTHADVLRGAGLEGWYGRMQRVLGYDVS 750
            DITVYQYKICPFC KLK VMDF  +PYSV EVNPLTKKEI FS+DYRKVPIV+M G+   DSP+II+ L+ RL ET  +   +   F S +A++WAEWADKQLAVLLFPN+TRNFSESYQAF YV  V TF + DK +NQV+G+ AMWAAQGK+KKKY IDDER ALF+A+  W+ AL   DG      PF GGDRP+LGD+ VFGCI AI GLDTH DVL   G+  WY  M   L Y  S
Sbjct:   34 DITVYQYKICPFCNKLKVVMDFLGIPYSVTEVNPLTKKEIKFSEDYRKVPIVRMGGELFKDSPVIIDELIARLRETKVMSDEEHAVFCSSDAKKWAEWADKQLAVLLFPNLTRNFSESYQAFSYVNDVDTFSMMDKISNQVIGSAAMWAAQGKIKKKYNIDDEREALFSAIKDWTDALREVDG------PFFGGDRPNLGDLCVFGCIRAIEGLDTHKDVLARQGVGAWYQSMVSTLDYAPS 269          
BLAST of mRNA_P-wetherbeei_contig5460.1.2 vs. uniprot
Match: A0A835YKS9_9STRA (Prostaglandin E synthase 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKS9_9STRA)

HSP 1 Score: 290 bits (742), Expect = 8.750e-93
Identity = 147/242 (60.74%), Postives = 171/242 (70.66%), Query Frame = 1
Query:   19 DLDITVYQYKICPFCCKLKSVMDFFDVPYSVVEVNPLTKKEIAFSKDYRKVPIVQMRGDTLTDSPLIIEALLQRLGETSAVPASDLEAFASPEARRWAEWADKQLAVLLFPNITRNFSESYQAFGYVWSVPTFGLADKAANQVLGATAMWAAQGKLKKKYGIDDERAALFAALTKWSAALDGGDGGDGGGQPFAGGDRPHLGDVAVFGCIHAIHGLDTHADVLRGA-GLEGWYGRMQRVLGY 741
            D DI VYQYKICPFC KLK+VMDF  +PY V EVNPLTKKEI FSKDY+KVPIV++    L DSP II+ALL  L    AV    L+AFASP+A  WAEWADKQLAVLLFPNITR+F ESYQAF YV  V TF   DKAANQ LG+ AMW AQGK+KKKY I+DER AL+ AL +W+  + G        + F+GG  P+LGD+ VFGC+ AI GLD H + ++    L  WY RM  VL Y
Sbjct:   42 DADIMVYQYKICPFCNKLKAVMDFLGIPYKVTEVNPLTKKEIKFSKDYQKVPIVRLDEQYLHDSPAIIQALLDGLKARGAVSKDQLDAFASPDAMNWAEWADKQLAVLLFPNITRSFGESYQAFSYVQGVSTFSALDKAANQALGSFAMWMAQGKIKKKYNIEDEREALYGALRQWTTEIQG--------KKFSGGAVPNLGDLCVFGCLRAIEGLDAHTEAMQEEKALAEWYARMLGVLQY 275          
BLAST of mRNA_P-wetherbeei_contig5460.1.2 vs. uniprot
Match: W7TEG9_9STRA (Prostaglandin E synthase 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TEG9_9STRA)

HSP 1 Score: 281 bits (720), Expect = 8.090e-88
Identity = 132/242 (54.55%), Postives = 170/242 (70.25%), Query Frame = 1
Query:   13 LRDLDITVYQYKICPFCCKLKSVMDFFDVPYSVVEVNPLTKKEIAFSKDYRKVPIVQMRGDTLTDSPLIIEALLQRLGETSAVPASDLEAFASPEARRWAEWADKQLAVLLFPNITRNFSESYQAFGYVWSVPTFGLADKAANQVLGATAMWAAQGKLKKKYGIDDERAALFAALTKWSAALDGGDGGDGGGQPFAGGDRPHLGDVAVFGCIHAIHGLDTHADVLRGAGLEGWYGRMQRVLG 738
            L  L IT+YQYKICPFCCK+K+V+DF+ VPY  ++VNPLTK EI FS DYRKVPI ++  + + DSP+I++ +   L      P  DL+ F SP+A RWAEWADK+LAVLLFPNITR+F ES+QAF YV  VP F   DK +NQ +GATAMWAAQGK+KKKY I DER ALF AL +W+  +        G +PF GG +P++GD+ V+ CIHAI GLD   D++    +  WY R++  +G
Sbjct:  157 LEGLRITLYQYKICPFCCKVKAVLDFYKVPYETLDVNPLTKAEIKFSSDYRKVPIARLGQEVVRDSPVIVKRIADMLYAARVAPTRDLDVFFSPDAMRWAEWADKELAVLLFPNITRSFGESFQAFSYVNEVPHFSFLDKLSNQWVGATAMWAAQGKIKKKYNIADERTALFDALQRWTREV--------GEKPFLGGTQPNVGDLGVYACIHAIEGLDAFKDLMANTDISEWYTRVEHAIG 390          
BLAST of mRNA_P-wetherbeei_contig5460.1.2 vs. uniprot
Match: A0A7S0MFA7_9CRYP (Prostaglandin E synthase 2 n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MFA7_9CRYP)

HSP 1 Score: 253 bits (645), Expect = 8.330e-78
Identity = 125/252 (49.60%), Postives = 170/252 (67.46%), Query Frame = 1
Query:   13 LRDLDITVYQYKICPFCCKLKSVMDFFDVPYSVVEVNPLTKKEIAFSKD---------YRKVPIVQMRGDTLTDSPLIIEALLQRLGETSAVPASDLEA-FASPEARRWAEWADKQLAVLLFPNITRNFSESYQAFGYVWSVPTFGLADKAANQVLGATAMWAAQGKLKKKYGIDDERAALFAALTKWSAALDGGDGGDGGGQPFAGGDRPHLGDVAVFGCIHAIHGLDTHADVLRGAGLEGWYGRMQRVLG 738
            L+ L + +YQY+ICPFC K+K+V+DF  VPY  +EVNPLTK E++F+KD         YRKVP+V++ GD + DSP++++ L++ LG+   + A+ +   +  P+   W  WADK+LAVLLFPN+TR  SESYQAFGYV SVP F   DK +N++ G+ AMW AQGK+KKKYGI DERAAL A+L +W+ A+        G   F GG  P+L D+ VFG + +I GL+THA VLR   +  WY RM   +G
Sbjct:   53 LQSLKLEMYQYEICPFCNKIKAVLDFHKVPYKTIEVNPLTKSELSFTKDLPEDHPAHKYRKVPLVRIGGDVVADSPVVLDRLVEGLGKEGVIGAAQMARDYKDPKVAEWVRWADKELAVLLFPNLTRTLSESYQAFGYVDSVPHFSFLDKVSNRMAGSLAMWLAQGKIKKKYGITDERAALRASLDRWTDAI--------GKSDFLGGASPNLADLCVFGTLRSIEGLETHAIVLRETQVGPWYERMAGRVG 296          
BLAST of mRNA_P-wetherbeei_contig5460.1.2 vs. uniprot
Match: A0A7S2C557_9EUKA (Prostaglandin E synthase 2 n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2C557_9EUKA)

HSP 1 Score: 250 bits (638), Expect = 1.020e-76
Identity = 122/238 (51.26%), Postives = 159/238 (66.81%), Query Frame = 1
Query:   28 ITVYQYKICPFCCKLKSVMDFFDVPYSVVEVNPLTKKEI-AFSKDYRKVPIVQMRGDTLTDSPLIIEALLQRLGETSAVPASDLEAFASPEARRWAEWADKQLAVLLFPNITRNFSESYQAFGYVWSVPTFGLADKAANQVLGATAMWAAQGKLKKKYGIDDERAALFAALTKW-SAALDGGDGGDGGGQPFAGGDRPHLGDVAVFGCIHAIHGLDTHADVLRGAGLEGWYGRMQRVL 735
            + VYQY+ICPFCCK+K+++D   VPY+  EVNPLTK EI A+S  Y+KVPI  + G+ + DSP+I   +L RL  +  +    L+ F SP A  WA+W+D++LAVL FPNITR F E+Y+AFGYVW VP F   DKAANQ +G+  MW AQGK+KKKYGIDDER A  + + KW S A+        G  PFAGG+RP+L DVAVFG + AI     H+D++    +  WY RM   +
Sbjct:   70 VQVYQYEICPFCCKVKALLDIHRVPYATTEVNPLTKSEIKAWSGGYKKVPIALIAGEQVNDSPVICTQILDRLAASGQIDKKLLDEFRSPSALEWAKWSDEKLAVLAFPNITRTFGEAYEAFGYVWGVPHFSQLDKAANQAIGSFFMWMAQGKIKKKYGIDDEREAFVSGVNKWMSEAV--------GTTPFAGGERPNLADVAVFGLLKAIDRTAAHSDIMAATSVAPWYERMLEAV 299          
BLAST of mRNA_P-wetherbeei_contig5460.1.2 vs. uniprot
Match: A0A0M0JG54_9EUKA (Prostaglandin E synthase 2 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JG54_9EUKA)

HSP 1 Score: 248 bits (633), Expect = 2.620e-76
Identity = 120/237 (50.63%), Postives = 166/237 (70.04%), Query Frame = 1
Query:   28 ITVYQYKICPFCCKLKSVMDFFDVPYSVVEVNPLTKKEI-AFSKDYRKVPIVQMRGDTLTDSPLIIEALLQRLGETSAVPASDLEAFASPEARRWAEWADKQLAVLLFPNITRNFSESYQAFGYVWSVPTFGLADKAANQVLGATAMWAAQGKLKKKYGIDDERAALFAALTKWSAALDGGDGGDGGGQPFAGGDRPHLGDVAVFGCIHAIHGLDTHADVLRGAGLEGWYGRMQRVL 735
            + +YQY+ICPFC K+K+++D + VPY   EVNPLTK EI A+S  YRKVPI ++  + + DS +I +ALL R+G    + A  L  F SP+A  WA+W+D++ AVLLFPNITR+FSESYQAFGYV SVP F + DK +NQ++G+  MW AQGK+KKKYGIDDERAA+ A +  W   L+ G G     +PFAGG +P+  DV VFGC+ AI   D + +++    ++ WY R++ ++
Sbjct:   45 VLIYQYEICPFCNKVKALLDLYRVPYETTEVNPLTKGEIKAWSGGYRKVPIAKLGDEQVNDSGVISQALLDRMGTAGVLDAKQLAEFRSPKALEWAKWSDEKFAVLLFPNITRSFSESYQAFGYVMSVPHFSMLDKVSNQIIGSFFMWMAQGKIKKKYGIDDERAAVVAGINHW---LNEGVGS----KPFAGGKQPNFADVCVFGCLKAIDRTDAYKEIMAETAIKPWYDRVEALV 274          
BLAST of mRNA_P-wetherbeei_contig5460.1.2 vs. uniprot
Match: A0A7S0IJQ6_9EUKA (Prostaglandin E synthase 2 n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IJQ6_9EUKA)

HSP 1 Score: 245 bits (625), Expect = 5.680e-75
Identity = 122/239 (51.05%), Postives = 163/239 (68.20%), Query Frame = 1
Query:   28 ITVYQYKICPFCCKLKSVMDFFDVPYSVVEVNPLTKKEIAFSKDYRKVPIVQMRG------DTLTDSPLIIEALLQRLGETSAVPASDLEAFASPEARRWAEWADKQLAVLLFPNITRNFSESYQAFGYVWSVPTFGLADKAANQVLGATAMWAAQGKLKKKYGIDDERAALFAALTKWSAALDGGDGGDGGGQP-FAGGDRPHLGDVAVFGCIHAIHGLDTHADVLRGAGLEGWYGRM 723
            + ++QY ICPFC K+K+++D   +PY  V+VNPLTKKEI FSK+YRKVPI  + G        + DSPLI + LL+R+  + AV + +L  F S  +  WAEW+DK+LAVLLFP +TR F+ES+QAFGYV  VP F + DK +NQV+GA AMW AQGK+KKKY IDDE AA+  A+  W          +G G+  FAGG +PHLGDVAV+GC+ AI    T ++++   G++ WY RM
Sbjct:   50 VRLFQYDICPFCNKIKAMLDLHKIPYETVDVNPLTKKEIKFSKEYRKVPIAMLGGLEGSGAVQVNDSPLIADTLLERMELSKAVRSDELAHFRSATSLEWAEWSDKKLAVLLFPRMTRTFAESFQAFGYVMQVPHFSMVDKLSNQVVGAFAMWMAQGKIKKKYAIDDEAAAVREAIAHWLK--------EGVGEASFAGGQKPHLGDVAVYGCLKAIDRTSTFSEIMAETGVKPWYERM 280          
BLAST of mRNA_P-wetherbeei_contig5460.1.2 vs. uniprot
Match: A0A7S1XY88_9STRA (Prostaglandin E synthase 2 (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XY88_9STRA)

HSP 1 Score: 241 bits (616), Expect = 1.910e-74
Identity = 120/224 (53.57%), Postives = 154/224 (68.75%), Query Frame = 1
Query:   13 LRDLDITVYQYKICPFCCKLKSVMDFFDVPYSVVEVNPLTKKEIAFSKDYRKVPIVQMRGDTLTDSPLIIEALLQRLGETSAVPASDLEAFASPEARRWAEWADKQLAVLLFPNITRNFSESYQAFGYVWSVPTFGLADKAANQVLGATAMWAAQGKLKKKYGIDDERAALFAALTKWSAALDGGDGGDGGGQPFAGGDRPHLGDVAVFGCIHAIHGLDTHADV 684
            L +LDI +YQYKICPFC K+K+++D++ V Y V+EVNPLTK +     DY+KVP+  + G+ +TDSP I+  L  ++ E   V   D   F S  A  W E+ADK+LAVLLFPNITRN++ESYQAF YV  VPTF   DK +N  +G+TAMW AQGKLKKKYGI+DER ALF+A+TK+  AL        G   F GG  P++GD+AVFG I AI G+D   D+
Sbjct:   14 LSELDIVIYQYKICPFCNKIKALLDYYGVDYHVIEVNPLTKAQTKAVTDYKKVPVANIGGEIVTDSPQIVRVLKAKMAEADDV---DFAGFFSEAAEEWTEFADKKLAVLLFPNITRNWNESYQAFSYVNDVPTFSSMDKMSNLAIGSTAMWLAQGKLKKKYGIEDERDALFSAVTKFEEAL--------GDNAFLGGANPNMGDIAVFGVIRAIEGMDAFNDL 226          
BLAST of mRNA_P-wetherbeei_contig5460.1.2 vs. uniprot
Match: R1DDQ7_EMIHU (Prostaglandin E synthase 2 n=4 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DDQ7_EMIHU)

HSP 1 Score: 243 bits (619), Expect = 4.360e-74
Identity = 126/245 (51.43%), Postives = 161/245 (65.71%), Query Frame = 1
Query:   28 ITVYQYKICPFCCKLKSVMDFFDVPYSVVEVNPLTKKEIAFSKDYRKVPIVQM------RGDTLTDSPLIIEALLQRLGETSAVPASDLEAFASPEARRWAEWADKQLAVLLFPNITRNFSESYQAFGYVWSVPTFGLADKAANQVLGATAMWAAQGKLKKKYGIDDERAALFAALTKWSAALDGGDGGDG-GGQPFAGGDRPHLGDVAVFGCIHAIHGLDTHADVLRGAG-LEGWYGRMQRVLG 738
            I +YQY+ICPFC K+K+++D   + Y  V+VNPLTKKEI    +YRKVPI  +        + + DSP+I E LL  +   +  PA   +AF SP+A  WA+W+D +LAVLLFPNITR+F E+YQAFGYV  VP F  AD+ +NQV+GA AMW AQGK+KKKY IDDER AL  A+  W         G+G  G+ FAGGD PH GDV V+GC+ AI     HA++L  A  L  WYGRM+  +G
Sbjct:   46 IRLYQYQICPFCNKIKALLDLHGLEYETVDVNPLTKKEIKPWSEYRKVPIAVLTPLAGGEPEQINDSPVIAERLLDAIDAAALRPARAAKAFRSPQAMEWAQWSDAKLAVLLFPNITRSFGEAYQAFGYVQDVPHFSTADRLSNQVVGAFAMWMAQGKIKKKYAIDDERQALRGAIRTWV--------GEGLAGRAFAGGDAPHYGDVCVYGCLRAIDRTAAHAEILDDAPELARWYGRMEEAVG 282          
BLAST of mRNA_P-wetherbeei_contig5460.1.2 vs. uniprot
Match: A0A8J5XKP9_DIALT (Prostaglandin E synthase 2 n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XKP9_DIALT)

HSP 1 Score: 237 bits (605), Expect = 7.180e-72
Identity = 119/239 (49.79%), Postives = 160/239 (66.95%), Query Frame = 1
Query:   28 ITVYQYKICPFCCKLKSVMDFFDVPYSVVEVNPLTKKEIAFSKDYRKVPIVQMRGDTL--TDSPLIIEALLQRLGETSAVPASDLEAFASPEARRWAEWADKQLAVLLFPNITRNFSESYQAFGYVWSVPTFGLADKAANQVLGATAMWAAQGKLKKKYGIDDERAALFAALTKWSAALDGGDGGDGGGQPFAGGDRPHLGDVAVFGCIHAIHGLDTHADVLRGAGLEGWYGRMQRVLG 738
            +T+YQY+ICPFC K+K+V+D+FDVPY+ V+VNPLTK E+ FS DY+KVP++      L   DS  I+  +L +L E  A+P  +  AF SPEA+RW+ W DKQLAV ++PNITR+F ES QAF YV  VP F   DK AN+ +GA AM  AQGK+KKKY I DERA +FA L +WS  +        G + F GGD+P L D++V+GC+  I    THA ++    L+ WY R++  +G
Sbjct:   66 LTLYQYEICPFCNKVKAVLDYFDVPYATVDVNPLTKAELKFSADYKKVPVLTAASPDLQLNDSADILAHVLTQLKEAGALP--ERAAFDSPEAQRWSAWVDKQLAVYIYPNITRSFHESQQAFAYVEDVPHFSALDKLANRYVGALAMVFAQGKIKKKYNIVDERAEMFAKLREWSVEV--------GDRRFHGGDQPDLADLSVYGCLRGIKATSTHAQIMAETDLQPWYQRVEAAVG 294          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5460.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIK1_ECTSI6.730e-10164.05Prostaglandin E synthase 2 n=2 Tax=Ectocarpus TaxI... [more]
A0A835YKS9_9STRA8.750e-9360.74Prostaglandin E synthase 2 n=1 Tax=Tribonema minus... [more]
W7TEG9_9STRA8.090e-8854.55Prostaglandin E synthase 2 n=2 Tax=Monodopsidaceae... [more]
A0A7S0MFA7_9CRYP8.330e-7849.60Prostaglandin E synthase 2 n=1 Tax=Cryptomonas cur... [more]
A0A7S2C557_9EUKA1.020e-7651.26Prostaglandin E synthase 2 n=1 Tax=Haptolina brevi... [more]
A0A0M0JG54_9EUKA2.620e-7650.63Prostaglandin E synthase 2 n=1 Tax=Chrysochromulin... [more]
A0A7S0IJQ6_9EUKA5.680e-7551.05Prostaglandin E synthase 2 n=1 Tax=Calcidiscus lep... [more]
A0A7S1XY88_9STRA1.910e-7453.57Prostaglandin E synthase 2 (Fragment) n=1 Tax=Phae... [more]
R1DDQ7_EMIHU4.360e-7451.43Prostaglandin E synthase 2 n=4 Tax=Emiliania huxle... [more]
A0A8J5XKP9_DIALT7.180e-7249.79Prostaglandin E synthase 2 n=1 Tax=Diacronema luth... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5460contigP-wetherbeei_contig5460:1541..3398 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LIK1
PFAMsGST_C_2,GST_N_3,Glutaredoxin
Model size1295
Max annot lvl2759|Eukaryota
KEGG rclassRC00672
KEGG koko:K05309
KEGG ReactionR02265
KEGG Pathwayko00590,ko01100,map00590,map01100
Hectar predicted targeting categoryother localisation
Exons4
Evalue8.93e-91
EggNOG OGsKOG3029@1|root,KOG3029@2759|Eukaryota
Ec32 ortholog descriptionGlutathione S-transferase, C-terminal-like
Ec32 orthologEc-18_003320.1
EC5.3.99.3
Descriptionprostaglandin-E synthase activity
Cds size729
COG categoryO
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5460.1.2prot_P-wetherbeei_contig5460.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5460 2026..3317 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186815.6857388-UTR-P-wetherbeei_contig5460:1540..20251683186815.6857388-UTR-P-wetherbeei_contig5460:1540..2025Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5460 1541..2025 -
1683186815.745634-UTR-P-wetherbeei_contig5460:3317..33981683186815.745634-UTR-P-wetherbeei_contig5460:3317..3398Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5460 3318..3398 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186815.7003012-CDS-P-wetherbeei_contig5460:2025..23911683186815.7003012-CDS-P-wetherbeei_contig5460:2025..2391Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5460 2026..2391 -
1683186815.712836-CDS-P-wetherbeei_contig5460:2674..27341683186815.712836-CDS-P-wetherbeei_contig5460:2674..2734Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5460 2675..2734 -
1683186815.7229152-CDS-P-wetherbeei_contig5460:2833..29921683186815.7229152-CDS-P-wetherbeei_contig5460:2833..2992Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5460 2834..2992 -
1683186815.7341495-CDS-P-wetherbeei_contig5460:3173..33171683186815.7341495-CDS-P-wetherbeei_contig5460:3173..3317Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5460 3174..3317 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5460.1.2

>prot_P-wetherbeei_contig5460.1.2 ID=prot_P-wetherbeei_contig5460.1.2|Name=mRNA_P-wetherbeei_contig5460.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=243bp
MDFFDVPYSVVEVNPLTKKEIAFSKDYRKVPIVQMRGDTLTDSPLIIEAL
LQRLGETSAVPASDLEAFASPEARRWAEWADKQLAVLLFPNITRNFSESY
QAFGYVWSVPTFGLADKAANQVLGATAMWAAQGKLKKKYGIDDERAALFA
ALTKWSAALDGGDGGDGGGQPFAGGDRPHLGDVAVFGCIHAIHGLDTHAD
VLRGAGLEGWYGRMQRVLGYDVSDGDGGRGGCRGLKEEAAAA*
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mRNA from alignment at P-wetherbeei_contig5460:1541..3398-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5460.1.2 ID=mRNA_P-wetherbeei_contig5460.1.2|Name=mRNA_P-wetherbeei_contig5460.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1858bp|location=Sequence derived from alignment at P-wetherbeei_contig5460:1541..3398- (Phaeothamnion wetherbeei SAG_119_79)
CAGGCCGATTCGCTTAGGGATCTGGACATTACAGTGTACCAGTACAAGAT CTGCCCATTCTGCTGTAAGCTCAAAAGCGTCATGGACTTCTTCGACGTGC CCTATTCCGTCGTTGAGGTCAATCCGCTCACAAAGAAAGAAATCGCGTTC AGCAAGGACTATCGCAAGGTCCCTATCGTTCAGATGAGGGGAGACACGCT GACAGACTCTCCGTTGATCATTGAGGTGAGTCTCACTGGCAAGTGAGAAT ATACGCTCATTACTTCGGACCAGAAGCTACTTGGTGCGCATGTGCTTCGG GGAGCTGTTACGAGCCGGTCGATCGCGTCTGACCCACACCTCTTCTCCGC TTGCCGTCTTCATCTTCTCCTTTCTATCACCTTGAACCTATACTACACCG CGGCAGGCGCTGCTGCAGCGTCTGGGCGAAACTTCGGCGGTGCCGGCGTC GGACCTCGAGGCCTTCGCCTCCCCCGAGGCACGCCGCTGGGCCGAGTGGG CGGACAAGCAGCTCGCCGTGCTCCTCTTCCCAAACATTACGCGAAACTTC TCGGAATCGTACCAGGTAAGATTCGGAATGTCATTTCGTCATCATTCACA ACGATGCGGATCTATTCACGTGTCTAACGGCTCCAAGCTTTCCGATGTCC CTTCCTCTGGACAGGCGTTCGGGTATGTATGGAGCGTTCCGACGTTCGGG CTCGCGGACAAGGCTGCAAATCAGGTGAAAGGGCCATCATCGAATTTTTG ATTGGACGTTTTCCAAGCTTTCCTTCTTGTCGTTGCACAACGTGTACCTC TGTCGAGTCTTCTTTCTTCATTCATCTCCTTCGATGTTCCAACGGTAACG ATTTCCTTCGTTTTAAGGAAAGAATTCCTTATCTTTCTCCATCGGATTCT CCGCTTTGCTGCCCTTATCGTCCTTTCTACCCTTGCATCGGCCCTGTCGC CCGGCTGTGCCGCACCCGGCCATCTCGCCGTGCCGTGCTGGCAACCGAAA TTTCCAGGTGCTGGGGGCGACGGCGATGTGGGCAGCGCAGGGAAAGCTGA AGAAGAAATACGGCATCGACGACGAGCGGGCGGCGCTTTTCGCGGCGCTC ACCAAATGGTCGGCGGCTCTCGACGGTGGCGACGGCGGCGACGGCGGCGG CCAGCCCTTCGCCGGCGGGGACCGGCCGCACCTCGGTGACGTCGCCGTCT TCGGCTGTATCCACGCCATCCACGGCCTCGACACGCACGCGGACGTGCTG CGCGGCGCCGGCCTCGAGGGATGGTACGGCCGCATGCAGCGGGTCCTGGG CTACGACGTCAGCGACGGCGATGGCGGCCGTGGCGGCTGCCGCGGGCTCA AAGAGGAGGCCGCGGCGGCTTAGCTCTGGAGGCGGCGTAGCGCTGGCGGC GACAGCCGTAGAGCGGTAGCCGGTAGCGGCAGAAGCGAAGGCGGCGGCGG GGATTGTAGCAGTTGCACCGGCGTTGGTTGTTGCGACCTAGAGTCATCGA TTAGCCAACAGCGGCGAGCAAAAGCGAAGGCGCAGCAGCCCGCAGCGTCT GATCCCCTCGTCGTTGAGTGGTGGTGCTGGTAAAAATCGTTGCTCCGGTA TCATCGCTACGGTAACGTGTGGTTGACTTGTACCACCGTCCGGAGACCCG CTGTCGTTGGTTCCGGGTGCAGGCGCGACAGAGAAAAAGATGCGGCGCAA AATAGCGCCTTTCCCGTGTCGTGTCCGGTGCTTCGCCAAACGGCCACGGG TGTCAAACGCCGATCCGGTGAGCCCAAAGTAAATGAATGGCACAAATCAC ATTGGTGACGGGAAGGTGATTGCGGACCTGCTCTATGATAAATCAGCGAT TGTGATTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5460:1541..3398-

>mRNA_P-wetherbeei_contig5460.1.2 ID=mRNA_P-wetherbeei_contig5460.1.2|Name=mRNA_P-wetherbeei_contig5460.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=729bp|location=Sequence derived from alignment at P-wetherbeei_contig5460:1541..3398- (Phaeothamnion wetherbeei SAG_119_79)
ATGGACTTCTTCGACGTGCCCTATTCCGTCGTTGAGGTCAATCCGCTCAC
AAAGAAAGAAATCGCGTTCAGCAAGGACTATCGCAAGGTCCCTATCGTTC
AGATGAGGGGAGACACGCTGACAGACTCTCCGTTGATCATTGAGGCGCTG
CTGCAGCGTCTGGGCGAAACTTCGGCGGTGCCGGCGTCGGACCTCGAGGC
CTTCGCCTCCCCCGAGGCACGCCGCTGGGCCGAGTGGGCGGACAAGCAGC
TCGCCGTGCTCCTCTTCCCAAACATTACGCGAAACTTCTCGGAATCGTAC
CAGGCGTTCGGGTATGTATGGAGCGTTCCGACGTTCGGGCTCGCGGACAA
GGCTGCAAATCAGGTGCTGGGGGCGACGGCGATGTGGGCAGCGCAGGGAA
AGCTGAAGAAGAAATACGGCATCGACGACGAGCGGGCGGCGCTTTTCGCG
GCGCTCACCAAATGGTCGGCGGCTCTCGACGGTGGCGACGGCGGCGACGG
CGGCGGCCAGCCCTTCGCCGGCGGGGACCGGCCGCACCTCGGTGACGTCG
CCGTCTTCGGCTGTATCCACGCCATCCACGGCCTCGACACGCACGCGGAC
GTGCTGCGCGGCGCCGGCCTCGAGGGATGGTACGGCCGCATGCAGCGGGT
CCTGGGCTACGACGTCAGCGACGGCGATGGCGGCCGTGGCGGCTGCCGCG
GGCTCAAAGAGGAGGCCGCGGCGGCTTAG
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