mRNA_P-wetherbeei_contig546.1.5 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig546.1.5
Unique NamemRNA_P-wetherbeei_contig546.1.5
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig546.1.5 vs. uniprot
Match: A0A6H5KF87_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF87_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 1.070e-27
Identity = 79/142 (55.63%), Postives = 100/142 (70.42%), Query Frame = 2 
Query:  275 VVSETVEATGPAAVSFFVAYHVVGVLIVFNLITTIIIQFYGEALNEKSRANQEEQRKVDRELQEAMLANVQEQRVLRLWGGVADQTAKALKEMSVVRQARDITGRELRRVLGVGNQGNQV-TEAELKKCQKHAKVDLVAALR 697
            VV ETV   G  A+ FFVAYHVVGVLIVFNL+T I+IQ YGEALNEKSR   +EQRK D++LQ+++    Q+QRVLRLWG    Q A +L   ++ R+ +   GRE RR+LG     +QV T  EL++CQK+AKVDL+  LR
Sbjct:  813 VVEETVNEVGHKALLFFVAYHVVGVLIVFNLLTAIMIQLYGEALNEKSRQGVDEQRKADQDLQDSLYEYNQKQRVLRLWGKRVTQGAASL---NITRETKVNNGREARRMLGAAGTKSQVLTVEELEECQKYAKVDLLRTLR 951
[Close]
BLAST of mRNA_P-wetherbeei_contig546.1.5 vs. uniprot
Match: A0A7Y8INS6_9BACT (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Thermoanaerobaculaceae bacterium TaxID=2699758 RepID=A0A7Y8INS6_9BACT)

HSP 1 Score: 60.1 bits (144), Expect = 6.340e-6
Identity = 42/124 (33.87%), Postives = 63/124 (50.81%), Query Frame = 2 
Query: 1025 PPPAPKPLSRRASLDAL--GYNLNALKKQASEDVSADVVRFADGEVIVKRGQTYGHCFMVQAGTVHIINRDGDEEEVV----GPGNLFGELAVLAHLPQPHNVVAMGEVSVVMVEREKLVEMIA 1378
            P  +P+ L R     A    + L AL++  S   S  V  F+ GE+IV+ G      F+++AGTV +   D    EVV    GPG  FGE+AVL   P+   +VA   V+++ +  E L  ++A
Sbjct:  170 PEASPQQLQREREASAFFSAFPLEALEELLS---STSVRSFSPGEIIVREGDPGVSLFLIEAGTVEVRTNDPAGREVVLAQLGPGEFFGEVAVLTGRPRTATIVACEAVTLIEILAEDLERIVA 290
[Close]
BLAST of mRNA_P-wetherbeei_contig546.1.5 vs. uniprot
Match: A8TNM5_9PROT (CheY-like receiver n=1 Tax=alpha proteobacterium BAL199 TaxID=331869 RepID=A8TNM5_9PROT)

HSP 1 Score: 55.1 bits (131), Expect = 1.540e-5
Identity = 29/90 (32.22%), Postives = 49/90 (54.44%), Query Frame = 2 
Query: 1139 FADGEVIVKRGQTYGHCFMVQAGTVHIINRDGDEEEVV---GPGNLFGELAVLAHLPQPHNVVAMGEVSVVMVEREKLVEMIASQSPSLR 1399
            F  GE+IV+ GQ     F+++AG V +  + GD + VV   G G +FGE+A++ H+P    V ++     +++ R +   MI    P L+
Sbjct:    8 FDPGEIIVEPGQPCVGAFLIEAGKVEVFRKSGDRKVVVAVLGKGEIFGEMALIDHVPHARYVRSVESTQCLLISRTQYEAMIEQTPPILK 97
[Close]
BLAST of mRNA_P-wetherbeei_contig546.1.5 vs. uniprot
Match: A0A2U1W267_9PROT (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Azospirillum sp. TSO22-1 TaxID=716789 RepID=A0A2U1W267_9PROT)

HSP 1 Score: 55.1 bits (131), Expect = 2.510e-5
Identity = 33/102 (32.35%), Postives = 55/102 (53.92%), Query Frame = 2 
Query: 1094 LKKQASEDVSADVVRFADGEVIVKRGQTYGHCFMVQAGTVHIINRDGDEEEVVGPGNLFGELAVLAHLPQPHNVVAMGEVSVVMVEREKLVEMIASQSPSLR 1399
            ++ + S D   D   ++DG V  ++  +    +++Q G V I  RD  E  V+GPG +FGELA+L   P+    VA+G+ +  ++ RE     I++  P LR
Sbjct:    1 MRSRRSFDRVLDRRGYSDGHVFFRQDDSATVAYLIQFGQVSI-RRDDAELAVLGPGRIFGELALLRAQPRVATAVAVGQTTCEVIRREDFKHAISAMPPILR 101
[Close]
BLAST of mRNA_P-wetherbeei_contig546.1.5 vs. uniprot
Match: UPI001AE57402 (cyclic nucleotide-binding domain-containing protein n=1 Tax=Azospirillum soli TaxID=1304799 RepID=UPI001AE57402)

HSP 1 Score: 56.6 bits (135), Expect = 4.320e-5
Identity = 30/95 (31.58%), Postives = 51/95 (53.68%), Query Frame = 2 
Query: 1115 DVSADVVRFADGEVIVKRGQTYGHCFMVQAGTVHIINRDGDEEEVVGPGNLFGELAVLAHLPQPHNVVAMGEVSVVMVEREKLVEMIASQSPSLR 1399
            D   D   F +G    ++G      +++Q+G V I  + G+E  V+GPG +FGELA+LAH P+    VA+      ++ ++   + ++S  P LR
Sbjct:  137 DKVVDRRMFREGHTFFRQGDEGTGAYLIQSGLVSI-QKSGEEIAVLGPGRIFGELALLAHRPRAATAVALEATVCEIIRKDSFTQALSSMPPILR 230
[Close]
BLAST of mRNA_P-wetherbeei_contig546.1.5 vs. uniprot
Match: A0A7T0C257_9BACT (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Candidatus Nitrohelix vancouverensis TaxID=2705534 RepID=A0A7T0C257_9BACT)

HSP 1 Score: 53.9 bits (128), Expect = 6.600e-5
Identity = 29/81 (35.80%), Postives = 49/81 (60.49%), Query Frame = 2 
Query: 1136 RFADGEVIVKRGQTYGHCFMVQAGTVHIINRDGDEEEVVGP---GNLFGELAVLAHLPQPHNVVAMGEVSVVMVEREKLVE 1369
            RFA G+VIV  G    + ++V +G VH+  R   +  V+G    G +FGE+ +++   +  NVVAMG+V V +++++K  E
Sbjct:   11 RFAKGDVIVSEGIKSNNAYVVISGKVHVTKRVDKKTIVIGTLGEGEVFGEMGLISEKVRSANVVAMGDVVVGVIDKDKFDE 91
[Close]
BLAST of mRNA_P-wetherbeei_contig546.1.5 vs. uniprot
Match: A0A3C0XN64_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3C0XN64_9CHLR)

HSP 1 Score: 57.8 bits (138), Expect = 7.870e-5
Identity = 28/88 (31.82%), Postives = 52/88 (59.09%), Query Frame = 2 
Query: 1136 RFADGEVIVKRGQTYGHCFMVQAGTVHIINRDGDEEEVVGPGNLFGELAVLAHLPQPHNVVAMGEVSVVMVEREKLVEMIASQSPSLR 1399
            R+  GEV+++ G+T G  ++++ GT  +   DG     +GPG+ FGELA++  +P+   V A G ++V ++ R     ++A+   S+R
Sbjct:  602 RYEGGEVVIQAGETGGGYYLIREGTADVTLPDGRYVRTLGPGDGFGELALIFGVPRTATVTAKGPLAVGVLGRPDFAALVAASGESMR 689
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig546.1.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KF87_9PHAE1.070e-2755.63Cyclic nucleotide-binding domain-containing protei... [more]
A0A7Y8INS6_9BACT6.340e-633.87Cyclic nucleotide-binding domain-containing protei... [more]
A8TNM5_9PROT1.540e-532.22CheY-like receiver n=1 Tax=alpha proteobacterium B... [more]
A0A2U1W267_9PROT2.510e-532.35Cyclic nucleotide-binding domain-containing protei... [more]
UPI001AE574024.320e-531.58cyclic nucleotide-binding domain-containing protei... [more]
A0A7T0C257_9BACT6.600e-535.80Cyclic nucleotide-binding domain-containing protei... [more]
A0A3C0XN64_9CHLR7.870e-531.82Uncharacterized protein n=1 Tax=Chloroflexi bacter... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig546contigP-wetherbeei_contig546:4573..8359 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog28377.ENSACAP00000000612
Preferred namePRKAR1B
PFAMsRIIa,cNMP_binding
Model size2362
Max annot lvl33208|Metazoa
KEGG koko:K04739
KEGG Pathwayko04910,map04910
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001932,GO:0001933,GO:0001934,GO:0003008,GO:0003014,GO:0003091,GO:0003674,GO:0004857,GO:0004860,GO:0004862,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005929,GO:0005952,GO:0006464,GO:0006468,GO:0006469,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007275,GO:0007596,GO:0007599,GO:0007610,GO:0007611,GO:0008150,GO:0008152,GO:0008283,GO:0008603,GO:0009611,GO:0009653,GO:0009719,GO:0009725,GO:0009887,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010243,GO:0010562,GO:0010563,GO:0010604,GO:0010605,GO:0016310,GO:0017076,GO:0019207,GO:0019210,GO:0019220,GO:0019222,GO:0019538,GO:0019887,GO:0019899,GO:0019900,GO:0019901,GO:0030104,GO:0030234,GO:0030291,GO:0030551,GO:0030552,GO:0030554,GO:0031323,GO:0031324,GO:0031325,GO:0031399,GO:0031400,GO:0031401,GO:0032147,GO:0032268,GO:0032269,GO:0032270,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032870,GO:0032991,GO:0033673,GO:0033674,GO:0033762,GO:0034199,GO:0034236,GO:0036094,GO:0036211,GO:0042060,GO:0042221,GO:0042325,GO:0042326,GO:0042327,GO:0042592,GO:0042995,GO:0043085,GO:0043086,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043412,GO:0043434,GO:0043549,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044441,GO:0044444,GO:0044463,GO:0044464,GO:0045859,GO:0045860,GO:0045936,GO:0045937,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048731,GO:0048856,GO:0048871,GO:0048878,GO:0050789,GO:0050790,GO:0050794,GO:0050817,GO:0050877,GO:0050878,GO:0050890,GO:0050891,GO:0050896,GO:0051018,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051246,GO:0051247,GO:0051248,GO:0051338,GO:0051347,GO:0051348,GO:0051716,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070887,GO:0071310,GO:0071375,GO:0071377,GO:0071417,GO:0071495,GO:0071704,GO:0071900,GO:0071901,GO:0080090,GO:0097159,GO:0097367,GO:0097546,GO:0098772,GO:0120025,GO:0120038,GO:1901265,GO:1901363,GO:1901564,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:2000479,GO:2000480
Exons5
Evalue2.6e-06
EggNOG OGsCOG0664@1|root,KOG1113@2759|Eukaryota,38GS1@33154|Opisthokonta,3BBF2@33208|Metazoa,3CS4Z@33213|Bilateria,486N9@7711|Chordata,48XS9@7742|Vertebrata
DescriptioncAMP-dependent protein kinase type I-beta regulatory
Cds size1392
COG categoryT
BRITEko00000,ko00001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig546.1.5prot_P-wetherbeei_contig546.1.5Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig546 5452..7858 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186815.5891042-UTR-P-wetherbeei_contig546:4572..50351683186815.5891042-UTR-P-wetherbeei_contig546:4572..5035Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig546 4573..5035 +
1683186815.6048775-UTR-P-wetherbeei_contig546:5445..54511683186815.6048775-UTR-P-wetherbeei_contig546:5445..5451Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig546 5446..5451 +
1683186815.6565957-UTR-P-wetherbeei_contig546:7858..83591683186815.6565957-UTR-P-wetherbeei_contig546:7858..8359Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig546 7859..8359 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186815.6153073-CDS-P-wetherbeei_contig546:5451..56131683186815.6153073-CDS-P-wetherbeei_contig546:5451..5613Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig546 5452..5613 +
1683186815.6253877-CDS-P-wetherbeei_contig546:5966..64401683186815.6253877-CDS-P-wetherbeei_contig546:5966..6440Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig546 5967..6440 +
1683186815.6358068-CDS-P-wetherbeei_contig546:6798..69761683186815.6358068-CDS-P-wetherbeei_contig546:6798..6976Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig546 6799..6976 +
1683186815.6463594-CDS-P-wetherbeei_contig546:7280..78581683186815.6463594-CDS-P-wetherbeei_contig546:7280..7858Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig546 7281..7858 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig546.1.5

>prot_P-wetherbeei_contig546.1.5 ID=prot_P-wetherbeei_contig546.1.5|Name=mRNA_P-wetherbeei_contig546.1.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=464bp
MLANVQEQRVLRLWGGVADQTAKALKEMSVVRQARDITGRELRRVLGVGN
QGNQVTEAELKKCQKHAKVDLVAALRRKEEKKASGGGKRGRSDTPPHRDT
PPHRRDGSASKRGGDGGGGGGDGSGGGHSREGSGAHARQGSGSGGGGGHV
RQGSSGGAPARCGSGGSNNPVAAAAARAILEGIDSPPPAPKPLSRRASLD
ALGYNLNALKKQASEDVSADVVRFADGEVIVKRGQTYGHCFMVQAGTVHI
INRDGDEEEVVGPGNLFGELAVLAHLPQPHNVVAMGEVSVVMVEREKLVE
MIASQSPSLRRSSLQGSRHSSRRICSPARGFGGGGGGFGSGKNDGDDGRG
GGDGGGGGGGCGGGGEGGGGGNGANNSGDGESGEDISVSGSLLVLPPGTF
VERDHVTGELRVRVPRRVLENAVAAATGARRDRDGGGGGNKLERSTSTDT
ASPSPQPPAPDLF*
back to top

mRNA from alignment at P-wetherbeei_contig546:4573..8359+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig546.1.5 ID=mRNA_P-wetherbeei_contig546.1.5|Name=mRNA_P-wetherbeei_contig546.1.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3787bp|location=Sequence derived from alignment at P-wetherbeei_contig546:4573..8359+ (Phaeothamnion wetherbeei SAG_119_79)
CGGGCTTCTCCACGCCCGGCACCTCAGTCATGACGATGGTCAAGCTGTTC
TTCGGGTCGGTTTTGTTGTGGACATCTCAGTCTGCATGCACATGGGTGAT
TAGGCTCGATGGCTCATTGTGTATCTTTGGAATCCTTTTATGGTCCTAGC
GTTCGGCCTGAAACTTCCGCCTGCTCCTGTTTAAGCTTGTGCGCTGATAC
CGGCCCTGCCCGGCCCGATTCCCTTTTCCTCTCCTACGGATCTTTCTGCC
AATCGCAGGGTGGGGTTGGGCGGCGTGGTGAGCGAGACGGTGGAGGCCAC
GGGCCCCGCGGCCGTGTCCTTCTTTGTGGCGTACCATGTTGTGGGGGTAC
TCATTGTCTTCAACCTGATCACCACCATCATCATCCAGTTCTACGGCGAA
GCGCTCAACGAGAAGAGCCGCGCCAACCAGGAGGAGCAGCGCAAGGTCGA
CCGCGAGCTCCAGGTGAGAGAGAAGACCATTGACCACCATTGCATCGTCC
TGTATCCGTAGGTTCTGTTTGTGACTTTGCATGTTCCTCTTTTTCACAGT
GGTGTAAGTGTAGAGCTATGTCCTTTCTTTGATAATTCCGCGTTTCTGTG
TCGCATGTGTGTATAGGATCTGTGAGCTGCGTGCGGATGCTGATCTCTGG
CGTTCGTTCGTCGAGAAACACTTGTTCTCCTTCCTAGCCCATTATCTGTC
GTGCTCCATCCCCATCTCCTTTCTCACAACTATTCGCTTGCTTCTTTCCC
CCTTCTACCCTCTTGTTTCGTCTCTCCTTCACCCGCGCACCATGCGCTGC
CGTCTTTTGTCTCCTTCTTCTCCCCCTTCCCATTTCCGCTCTCTCCTCCG
CTCCCCTCCCCTTTCCGCTGCAGGAGGCGATGCTGGCGAACGTGCAGGAG
CAGCGGGTGCTTCGGCTGTGGGGCGGTGTCGCTGACCAGACCGCCAAGGC
CCTCAAGGAGATGTCCGTTGTGCGTCAGGCCCGCGATATCACCGGCCGGG
AGCTGCGCCGCGTCCTCGGCGTCGGCAACCAGGGCAACCAGGTGGGTTGG
CGGAGCAGCCTTTGAGGGTGGTTTGGAGGTTTGGCTGCTGCAGGCTGATT
CGGTTCGTATCGGTCGGTTCGGCCGGCAAGAAGAGGGCAAGCGTGAGAGA
GGGTGTAGTGGACAGGAGATTGCTTGTTTGCTGTTGTTCCCATTGTGTTC
AAGCCGCGTGCCTTGATGGGGTTCGTGCTCAGGTTCGGACCTGTTTCCAC
CTGTTCCACCTGTTTAACCTGTTGTTTGTGTCAAAGGCGTCGGTGACCCT
ATCTACTCCAGACTGTGGCCTACTCCCTACCGACGCTTCCATTCCTATCA
TCACACCTCTCGCCGATTCTTTACATTCGTAAATTGTAAAACAGGTGACG
GAGGCGGAGCTGAAGAAGTGCCAAAAGCACGCCAAAGTGGACCTCGTGGC
TGCGCTGCGGCGGAAGGAGGAGAAGAAGGCGAGCGGCGGCGGCAAGCGCG
GCCGCTCAGACACCCCGCCGCACCGGGACACGCCGCCACACCGCCGGGAC
GGCTCGGCCAGCAAGCGCGGCGGCGACGGCGGCGGCGGCGGCGGCGACGG
CAGCGGCGGCGGCCACTCGCGAGAGGGCAGCGGGGCCCACGCGCGGCAGG
GAAGCGGCAGCGGTGGCGGTGGGGGTCACGTGCGACAAGGCAGCAGTGGC
GGGGCGCCCGCGCGGTGCGGCAGCGGTGGCTCCAACAATCCGGTGGCGGC
CGCCGCCGCTCGGGCGATTTTGGAGGGGATCGACAGCCCGCCGCCGGCGC
CGAAGCCGCTGAGCCGCCGGGCGTCACTCGACGCGCTCGGCTACAACCTC
AATGCCCTCAAGAAGCAGGTGAGTGGTCTTTGGGATGTTTGGATAATACG
CTCTGTGGGACACGACACCTGCCGAGAGCGTTCGTTACTTTCGTCCTCCT
ATCCAGTGGAATCTAAAGATGCCGGAAAGATAGGGTGTCGGCGTTGCTGA
CCGTTGAGTTCTATCGTGCTTACACGAATGTTCTTTTTCCCTTTGGCATC
GGTGACCTCGATGCCGTCGACGGCGGCGATGACCCGGTGCATATCGTTTG
TGATTTTAATGCACCAACGGCGGCGGCTCCGGCGGCGACTCCGGCGACGG
CGGCGGCGGCGGTGGAATGGCGGCTATAACCACACGGCGACTGGCGGCCG
CGATATTTGCCACTGCCCTCTGCCAGGCGTCGGAGGATGTGTCGGCGGAC
GTGGTGCGCTTCGCAGACGGCGAGGTGATCGTGAAGCGCGGGCAGACGTA
CGGGCACTGCTTCATGGTGCAGGCGGGCACTGTCCACATCATCAACCGGG
ACGGTGACGAAGAGGAGGTCGTCGGGCCCGGAAACCTCTTCGGGGAGCTC
GCAGGCGAGTCGTCTTTGGGTCGGTGCGACCTGCTCGGGGCAGAGTAAAG
ATGCGAGTGGCAGCAGTGACGGGATTGGCGGAGGCTCGGGCGGCAGCAGC
GGCAGCTGCGGTGGCGGCCGCGGCAGTCTTGGGGCCTTTCATGCCCTTCA
CCTCTCTTCCTCTTCTTCTCTGCTCGTTTGCTCATGTTGTGCAACGGGAT
GGCTTTCACTGATCGCTCTCTCGCCTCGCGACTCGTTTCCCGTGCATGGG
TGCTTCTTCGCATATCCCCCGCCGCCACCTCTTCTTTCCGCGCGCCCCTT
TTCCGCAGTTCTGGCGCACCTGCCACAGCCGCACAACGTCGTGGCGATGG
GGGAGGTGTCCGTTGTGATGGTCGAGCGGGAAAAGCTCGTGGAGATGATA
GCCTCGCAGAGCCCGTCGCTGCGGCGGAGCTCGCTGCAGGGCAGCCGCCA
CAGTAGCCGCCGGATCTGCTCGCCGGCCCGCGGCTTCGGCGGTGGCGGCG
GCGGTTTCGGTAGCGGCAAAAACGACGGCGATGATGGCCGCGGAGGCGGC
GACGGCGGCGGAGGCGGCGGCGGCTGCGGCGGCGGCGGCGAGGGCGGCGG
CGGTGGAAATGGAGCCAACAACAGCGGCGACGGCGAGTCGGGCGAAGACA
TCAGCGTTTCGGGTTCACTGCTGGTGCTCCCGCCGGGGACGTTTGTAGAG
AGGGACCATGTCACAGGCGAACTACGCGTCCGCGTCCCGCGCCGCGTCTT
GGAAAACGCGGTGGCGGCGGCAACGGGCGCGCGGCGGGACAGAGACGGCG
GCGGCGGCGGCAACAAGCTGGAGCGGTCGACGTCGACTGACACGGCGTCG
CCGTCGCCACAACCGCCTGCGCCAGATCTCTTTTGAGCAGGGCGGCCGTG
GTATGGCTTTGCGGTGGTGGAGAATGCCGTCGCTGCGGCGAGAGTGGCGG
CAGCTGGGTGGCGGCGGCAGCGTTGTCGCGGTCGACTGCAGCGATGGCAG
CGGCAGCAACAATGGCGGCGGGGGCCGCGATGACATGTGGGGATCGGCCG
TGCAGCTGCTATGCTGGAAAATACCACGATCACCCCCGTGGAAGTTCAAG
ATTGATGAGATAAAAACGACGGCGGGGGCGGCGACGGCTGTGGCTGTGGT
AGCGGCGGCGGCACTAAATGCTATTCGTGAAGGCACGACGAGGTGTACGT
GCCCCTTTGAAGCGGGCGGCGGCGTGCCGCAATGCCGTGGTACATTCGCT
TTTCTTTTGGGGGCTGGGAGACAACAGAGAAGATGCGAATTAGTGGCCTG
AGTTGTTAAAGGGCGGGGCGGCTTGGTGCTGGTCCCGCCCAATTCCTTCA
CCATTGACAACCATTAAATTGACGGCGTAGATTTGCC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig546:4573..8359+

>mRNA_P-wetherbeei_contig546.1.5 ID=mRNA_P-wetherbeei_contig546.1.5|Name=mRNA_P-wetherbeei_contig546.1.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1392bp|location=Sequence derived from alignment at P-wetherbeei_contig546:4573..8359+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGGCGAACGTGCAGGAGCAGCGGGTGCTTCGGCTGTGGGGCGGTGT
CGCTGACCAGACCGCCAAGGCCCTCAAGGAGATGTCCGTTGTGCGTCAGG
CCCGCGATATCACCGGCCGGGAGCTGCGCCGCGTCCTCGGCGTCGGCAAC
CAGGGCAACCAGGTGACGGAGGCGGAGCTGAAGAAGTGCCAAAAGCACGC
CAAAGTGGACCTCGTGGCTGCGCTGCGGCGGAAGGAGGAGAAGAAGGCGA
GCGGCGGCGGCAAGCGCGGCCGCTCAGACACCCCGCCGCACCGGGACACG
CCGCCACACCGCCGGGACGGCTCGGCCAGCAAGCGCGGCGGCGACGGCGG
CGGCGGCGGCGGCGACGGCAGCGGCGGCGGCCACTCGCGAGAGGGCAGCG
GGGCCCACGCGCGGCAGGGAAGCGGCAGCGGTGGCGGTGGGGGTCACGTG
CGACAAGGCAGCAGTGGCGGGGCGCCCGCGCGGTGCGGCAGCGGTGGCTC
CAACAATCCGGTGGCGGCCGCCGCCGCTCGGGCGATTTTGGAGGGGATCG
ACAGCCCGCCGCCGGCGCCGAAGCCGCTGAGCCGCCGGGCGTCACTCGAC
GCGCTCGGCTACAACCTCAATGCCCTCAAGAAGCAGGCGTCGGAGGATGT
GTCGGCGGACGTGGTGCGCTTCGCAGACGGCGAGGTGATCGTGAAGCGCG
GGCAGACGTACGGGCACTGCTTCATGGTGCAGGCGGGCACTGTCCACATC
ATCAACCGGGACGGTGACGAAGAGGAGGTCGTCGGGCCCGGAAACCTCTT
CGGGGAGCTCGCAGTTCTGGCGCACCTGCCACAGCCGCACAACGTCGTGG
CGATGGGGGAGGTGTCCGTTGTGATGGTCGAGCGGGAAAAGCTCGTGGAG
ATGATAGCCTCGCAGAGCCCGTCGCTGCGGCGGAGCTCGCTGCAGGGCAG
CCGCCACAGTAGCCGCCGGATCTGCTCGCCGGCCCGCGGCTTCGGCGGTG
GCGGCGGCGGTTTCGGTAGCGGCAAAAACGACGGCGATGATGGCCGCGGA
GGCGGCGACGGCGGCGGAGGCGGCGGCGGCTGCGGCGGCGGCGGCGAGGG
CGGCGGCGGTGGAAATGGAGCCAACAACAGCGGCGACGGCGAGTCGGGCG
AAGACATCAGCGTTTCGGGTTCACTGCTGGTGCTCCCGCCGGGGACGTTT
GTAGAGAGGGACCATGTCACAGGCGAACTACGCGTCCGCGTCCCGCGCCG
CGTCTTGGAAAACGCGGTGGCGGCGGCAACGGGCGCGCGGCGGGACAGAG
ACGGCGGCGGCGGCGGCAACAAGCTGGAGCGGTCGACGTCGACTGACACG
GCGTCGCCGTCGCCACAACCGCCTGCGCCAGATCTCTTTTGA
back to top