mRNA_P-wetherbeei_contig54512.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig54512.1.1
Unique NamemRNA_P-wetherbeei_contig54512.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig54512.1.1 vs. uniprot
Match: A0A2D7FH07_9HYPH (Alpha/beta hydrolase n=2 Tax=Hyphomicrobiaceae TaxID=45401 RepID=A0A2D7FH07_9HYPH)

HSP 1 Score: 192 bits (487), Expect = 4.020e-60
Identity = 87/101 (86.14%), Postives = 95/101 (94.06%), Query Frame = 1 
Query:    1 MPELIINGPVGRLEARYHHEPDPRSPIALILHPHPQFGGTMNNPVIHQLYYMFHERGFSTLRFNFRGVGRSQGYFDNGPGELSDAASALDWLQIVKPDAKA 303
            MPELIINGPVGRLE+RYHHEPDPRSP+ALILHPHPQFGGTMNN V++ LYY F ERGFS LRFNFRGVGRSQGYFDNGPGEL+DAA+ALDW+QI KPD+KA
Sbjct:    1 MPELIINGPVGRLESRYHHEPDPRSPLALILHPHPQFGGTMNNQVVYHLYYTFVERGFSVLRFNFRGVGRSQGYFDNGPGELADAATALDWMQIAKPDSKA 101
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BLAST of mRNA_P-wetherbeei_contig54512.1.1 vs. uniprot
Match: A0A7C4TWF2_9HYPH (Alpha/beta fold hydrolase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TWF2_9HYPH)

HSP 1 Score: 190 bits (483), Expect = 1.630e-59
Identity = 87/101 (86.14%), Postives = 93/101 (92.08%), Query Frame = 1 
Query:    1 MPELIINGPVGRLEARYHHEPDPRSPIALILHPHPQFGGTMNNPVIHQLYYMFHERGFSTLRFNFRGVGRSQGYFDNGPGELSDAASALDWLQIVKPDAKA 303
            MPELIINGP GRLEARYHHEPDP SPIALILHPHPQFGGTMNN +++ LYY F ERGFS LRFNFRGVGRSQG+FDNGPGEL+DAASALDWLQ+ KPDAKA
Sbjct:    1 MPELIINGPAGRLEARYHHEPDPASPIALILHPHPQFGGTMNNQIVYHLYYTFAERGFSVLRFNFRGVGRSQGFFDNGPGELADAASALDWLQMAKPDAKA 101
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BLAST of mRNA_P-wetherbeei_contig54512.1.1 vs. uniprot
Match: A0A2W4REQ9_9PROT (Alpha/beta hydrolase n=2 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4REQ9_9PROT)

HSP 1 Score: 181 bits (460), Expect = 5.210e-56
Identity = 84/100 (84.00%), Postives = 90/100 (90.00%), Query Frame = 1 
Query:    1 MPELIINGPVGRLEARYHHEPDPRSPIALILHPHPQFGGTMNNPVIHQLYYMFHERGFSTLRFNFRGVGRSQGYFDNGPGELSDAASALDWLQIVKPDAK 300
            MPELIINGP GRLEARYHHEP   SPIALILHPHPQFGGTMNN V++ LYY F ERGFS LRFNFRGVGRSQG+FDNGPGEL+DAASALDWLQ+ KP+AK
Sbjct:    1 MPELIINGPAGRLEARYHHEPARDSPIALILHPHPQFGGTMNNQVVYHLYYTFAERGFSVLRFNFRGVGRSQGFFDNGPGELADAASALDWLQLAKPEAK 100
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BLAST of mRNA_P-wetherbeei_contig54512.1.1 vs. uniprot
Match: A0A2S5MTE5_HYPSQ (Alpha/beta hydrolase n=2 Tax=unclassified Hyphomicrobium TaxID=2619925 RepID=A0A2S5MTE5_HYPSQ)

HSP 1 Score: 182 bits (461), Expect = 9.860e-56
Identity = 83/100 (83.00%), Postives = 91/100 (91.00%), Query Frame = 1 
Query:    1 MPELIINGPVGRLEARYHHEPDPRSPIALILHPHPQFGGTMNNPVIHQLYYMFHERGFSTLRFNFRGVGRSQGYFDNGPGELSDAASALDWLQIVKPDAK 300
            MPELI+NGP GR+EARYHH+P P SPIALILHPHPQFGGTMNN V++ LYY F ERGFS LRFNFRGVGRSQG++D GPGEL+DAASALDWLQIVKPDAK
Sbjct:    1 MPELIMNGPAGRIEARYHHDPKPDSPIALILHPHPQFGGTMNNQVVYSLYYTFAERGFSVLRFNFRGVGRSQGFWDGGPGELADAASALDWLQIVKPDAK 100
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BLAST of mRNA_P-wetherbeei_contig54512.1.1 vs. uniprot
Match: A0A3S0EGI3_9HYPH (Alpha/beta hydrolase (Fragment) n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3S0EGI3_9HYPH)

HSP 1 Score: 176 bits (445), Expect = 1.840e-55
Identity = 82/97 (84.54%), Postives = 86/97 (88.66%), Query Frame = 1 
Query:    1 MPELIINGPVGRLEARYHHEPDPRSPIALILHPHPQFGGTMNNPVIHQLYYMFHERGFSTLRFNFRGVGRSQGYFDNGPGELSDAASALDWLQIVKP 291
            MPELIINGP GRLEARYHHE    SPIALILHPHPQFGGTMNN V++ LYYMF ERGFS LRFNFRGVGRSQGYFDNGPGEL+DAASALDWLQ+  P
Sbjct:    1 MPELIINGPSGRLEARYHHESSSNSPIALILHPHPQFGGTMNNQVVYALYYMFVERGFSVLRFNFRGVGRSQGYFDNGPGELADAASALDWLQLQNP 97
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BLAST of mRNA_P-wetherbeei_contig54512.1.1 vs. uniprot
Match: A0A7C2M111_9HYPH (Alpha/beta fold hydrolase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2M111_9HYPH)

HSP 1 Score: 179 bits (454), Expect = 3.760e-55
Identity = 83/100 (83.00%), Postives = 89/100 (89.00%), Query Frame = 1 
Query:    1 MPELIINGPVGRLEARYHHEPDPRSPIALILHPHPQFGGTMNNPVIHQLYYMFHERGFSTLRFNFRGVGRSQGYFDNGPGELSDAASALDWLQIVKPDAK 300
            MPELIINGP GRLEARYHHE    SPIALILHPHPQFGGTMNN V++ LYYMF ERGFS LRFNFRGVGRSQGYFDNGPGEL+DAASALDWLQ+  PD++
Sbjct:    1 MPELIINGPAGRLEARYHHESAANSPIALILHPHPQFGGTMNNQVVYALYYMFVERGFSVLRFNFRGVGRSQGYFDNGPGELADAASALDWLQLQNPDSR 100
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BLAST of mRNA_P-wetherbeei_contig54512.1.1 vs. uniprot
Match: A0A109BKH7_HYPSL (Alpha/beta hydrolase n=2 Tax=Hyphomicrobium sulfonivorans TaxID=121290 RepID=A0A109BKH7_HYPSL)

HSP 1 Score: 178 bits (452), Expect = 2.480e-54
Identity = 85/100 (85.00%), Postives = 89/100 (89.00%), Query Frame = 1 
Query:    1 MPELIINGPVGRLEARYHHEPDPRSPIALILHPHPQFGGTMNNPVIHQLYYMFHERGFSTLRFNFRGVGRSQGYFDNGPGELSDAASALDWLQIVKPDAK 300
            MPELIINGP GRLEARYHHEP   SPIALILHPHPQFGGTMNN V++ LY+ F ERGFS LRFNFRGVGRSQG +D GPGELSDAASALDWLQIVKPDAK
Sbjct:    1 MPELIINGPAGRLEARYHHEPASDSPIALILHPHPQFGGTMNNQVVYTLYHTFVERGFSVLRFNFRGVGRSQGIWDGGPGELSDAASALDWLQIVKPDAK 100
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BLAST of mRNA_P-wetherbeei_contig54512.1.1 vs. uniprot
Match: V5SEZ7_9HYPH (Alpha/beta hydrolase n=3 Tax=Hyphomicrobium TaxID=81 RepID=V5SEZ7_9HYPH)

HSP 1 Score: 178 bits (451), Expect = 3.220e-54
Identity = 82/100 (82.00%), Postives = 90/100 (90.00%), Query Frame = 1 
Query:    1 MPELIINGPVGRLEARYHHEPDPRSPIALILHPHPQFGGTMNNPVIHQLYYMFHERGFSTLRFNFRGVGRSQGYFDNGPGELSDAASALDWLQIVKPDAK 300
            MPELIINGP GR+EARYHHEP   SPIALILHPHPQFGGTMNN V++ LYY F +RGFS LRFNFRGVGRSQG++D GPGEL+DAASALDWLQ+VKPDAK
Sbjct:    1 MPELIINGPAGRIEARYHHEPANDSPIALILHPHPQFGGTMNNQVVYSLYYTFAQRGFSVLRFNFRGVGRSQGFWDGGPGELADAASALDWLQMVKPDAK 100
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BLAST of mRNA_P-wetherbeei_contig54512.1.1 vs. uniprot
Match: A0A117S7Z9_9PROT (Alpha/beta hydrolase n=1 Tax=Alphaproteobacteria bacterium BRH_c36 TaxID=1734406 RepID=A0A117S7Z9_9PROT)

HSP 1 Score: 176 bits (447), Expect = 8.630e-54
Identity = 81/100 (81.00%), Postives = 90/100 (90.00%), Query Frame = 1 
Query:    1 MPELIINGPVGRLEARYHHEPDPRSPIALILHPHPQFGGTMNNPVIHQLYYMFHERGFSTLRFNFRGVGRSQGYFDNGPGELSDAASALDWLQIVKPDAK 300
            MPELI+NGPVGRLEARYHHEP   +PIALILHPHPQFGGTMNN V++ LY+ F ERGF  LRFNFRGVGRSQGY+D GPGEL+DAASALDW+Q+VKPDAK
Sbjct:    1 MPELIMNGPVGRLEARYHHEPASDAPIALILHPHPQFGGTMNNQVVYNLYHTFVERGFCVLRFNFRGVGRSQGYWDGGPGELADAASALDWMQLVKPDAK 100
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BLAST of mRNA_P-wetherbeei_contig54512.1.1 vs. uniprot
Match: A0A397Q6H9_9HYPH (Peptidase_S15 domain-containing protein n=1 Tax=Dichotomicrobium thermohalophilum TaxID=933063 RepID=A0A397Q6H9_9HYPH)

HSP 1 Score: 174 bits (442), Expect = 2.340e-53
Identity = 79/100 (79.00%), Postives = 86/100 (86.00%), Query Frame = 1 
Query:    1 MPELIINGPVGRLEARYHHEPDPRSPIALILHPHPQFGGTMNNPVIHQLYYMFHERGFSTLRFNFRGVGRSQGYFDNGPGELSDAASALDWLQIVKPDAK 300
            MPE+IINGP GRLE RYHHEP   SPIALILHPHPQFGGTMNNP+++ LYY F  RGFS LR NFRGVGRSQG FDNGPGELSDAA+ALDWLQ+  PDA+
Sbjct:    1 MPEVIINGPAGRLEGRYHHEPAADSPIALILHPHPQFGGTMNNPIVYHLYYAFARRGFSVLRINFRGVGRSQGLFDNGPGELSDAATALDWLQVYNPDAR 100
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54512.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D7FH07_9HYPH4.020e-6086.14Alpha/beta hydrolase n=2 Tax=Hyphomicrobiaceae Tax... [more]
A0A7C4TWF2_9HYPH1.630e-5986.14Alpha/beta fold hydrolase n=1 Tax=Hyphomicrobiales... [more]
A0A2W4REQ9_9PROT5.210e-5684.00Alpha/beta hydrolase n=2 Tax=Proteobacteria bacter... [more]
A0A2S5MTE5_HYPSQ9.860e-5683.00Alpha/beta hydrolase n=2 Tax=unclassified Hyphomic... [more]
A0A3S0EGI3_9HYPH1.840e-5584.54Alpha/beta hydrolase (Fragment) n=1 Tax=Hyphomicro... [more]
A0A7C2M111_9HYPH3.760e-5583.00Alpha/beta fold hydrolase n=1 Tax=Hyphomicrobiales... [more]
A0A109BKH7_HYPSL2.480e-5485.00Alpha/beta hydrolase n=2 Tax=Hyphomicrobium sulfon... [more]
V5SEZ7_9HYPH3.220e-5482.00Alpha/beta hydrolase n=3 Tax=Hyphomicrobium TaxID=... [more]
A0A117S7Z9_9PROT8.630e-5481.00Alpha/beta hydrolase n=1 Tax=Alphaproteobacteria b... [more]
A0A397Q6H9_9HYPH2.340e-5379.00Peptidase_S15 domain-containing protein n=1 Tax=Di... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig54512contigP-wetherbeei_contig54512:228..530 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1267005.KB911256_gene1982
Preferred nameQU41_16170
PFAMsHydrolase_4,Peptidase_S15
Model size303
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K07018
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.27e-55
EggNOG OGsCOG2945@1|root,COG2945@2|Bacteria,1MUDY@1224|Proteobacteria,2TRMI@28211|Alphaproteobacteria,3N6BC@45401|Hyphomicrobiaceae
DescriptionX-Pro dipeptidyl-peptidase (S15 family)
Cds size303
COG categoryS
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186814.648384-CDS-P-wetherbeei_contig54512:227..5301683186814.648384-CDS-P-wetherbeei_contig54512:227..530Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig54512 228..530 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig54512.1.1prot_P-wetherbeei_contig54512.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig54512 228..530 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig54512.1.1

>prot_P-wetherbeei_contig54512.1.1 ID=prot_P-wetherbeei_contig54512.1.1|Name=mRNA_P-wetherbeei_contig54512.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=101bp
MPELIINGPVGRLEARYHHEPDPRSPIALILHPHPQFGGTMNNPVIHQLY
YMFHERGFSTLRFNFRGVGRSQGYFDNGPGELSDAASALDWLQIVKPDAK
A
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mRNA from alignment at P-wetherbeei_contig54512:228..530+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig54512.1.1 ID=mRNA_P-wetherbeei_contig54512.1.1|Name=mRNA_P-wetherbeei_contig54512.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=303bp|location=Sequence derived from alignment at P-wetherbeei_contig54512:228..530+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCCGAGTTGATCATCAACGGCCCCGTGGGGCGACTTGAAGCACGCTA
TCACCATGAGCCCGATCCTCGCAGCCCGATCGCACTGATCCTGCATCCGC
ATCCGCAATTCGGCGGAACGATGAACAACCCGGTGATCCACCAGCTCTAT
TATATGTTCCACGAGCGCGGATTCTCAACGCTGCGGTTCAATTTCCGCGG
CGTCGGCCGCAGCCAGGGCTACTTCGACAACGGCCCGGGTGAGCTTTCGG
ATGCCGCGTCGGCGCTCGACTGGCTGCAGATCGTCAAGCCGGATGCGAAG
GCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig54512:228..530+

>mRNA_P-wetherbeei_contig54512.1.1 ID=mRNA_P-wetherbeei_contig54512.1.1|Name=mRNA_P-wetherbeei_contig54512.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=303bp|location=Sequence derived from alignment at P-wetherbeei_contig54512:228..530+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCCGAGTTGATCATCAACGGCCCCGTGGGGCGACTTGAAGCACGCTA
TCACCATGAGCCCGATCCTCGCAGCCCGATCGCACTGATCCTGCATCCGC
ATCCGCAATTCGGCGGAACGATGAACAACCCGGTGATCCACCAGCTCTAT
TATATGTTCCACGAGCGCGGATTCTCAACGCTGCGGTTCAATTTCCGCGG
CGTCGGCCGCAGCCAGGGCTACTTCGACAACGGCCCGGGTGAGCTTTCGG
ATGCCGCGTCGGCGCTCGACTGGCTGCAGATCGTCAAGCCGGATGCGAAG
GCG
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